| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197103914
Identifier: 197103914
GI number: 197103914
Start: 454271
End: 455521
Strand: Direct
Name: 197103914
Synonym: PHZ_c0448
Alternate gene names: NA
Gene position: 454271-455521 (Clockwise)
Preceding gene: 197103913
Following gene: 197103916
Centisome position: 11.37
GC content: 74.1
Gene sequence:
>1251_bases ATGGCTTGCGCATCCAGACTGGCCCTCGCCGCGGGCGTCGCGGTCCTCGGGACCACCGCCTCCGCCCAGACCCAGCAGAA GGTGACCGGCCCGGTCGCCACCTACTGGATGAGCGCCTCGACCCAGACCGGCTTCGGCATGCCCGGCGCCGGCGGCCAGC CGGACCCCTCGGCGATCATGCGCCAGATGATGGGCGGCGGGGGGGCGCAGAAGTCGCTGGTCCTCCAGCTCGGCTCCAGC CAGGCGAGCCCCGCGCCGGCGGCCGACCACCTGCCGCCGCCCGCGCTGCAGGCCGGCGCGCGCCTGCCGCTGCTGACGCC CCGGCAGGTCCCGGCGACCCGGGACGAGGACGAGACGCCCGAGGTCCCGCGCGAGTACCAGAAGCCGCGCGGCAAGATGC TGGTGTTCTGGGGCTGCGGCGAGCGGGCCAGGCCCGGCCAGCCCTACGTCATCGACTTCGCCAAGATGGCCGAGGGCAAG CAGAACCCCGCGGGCCTCTTCAAGGGCCTCGACTACCGGCCGATGCGGCCGCCGGCGCCCGGCCGCAACCGCACCTACGG CGAGTGGCCGAACGAGAAGACCCGCGACCTCGTCCCCTCGGCGGGTTCGCTGGTCGGGGCGCACACCGTCCGCGGCAACT ATGCGCCGGAGATCAATTTCACCCTCGGCCGCGAGCAGGACTTCCTCGCCCCGCTGGTGCTGACCACCAACCAGAAGGCG CCCGGCGGCTGGGCGAACCTGGCCTGGAATCCCGTCCCGCAGGCCCGCGCCTACTACGCCAGCGCCATGGGCGGCGACGG CGAGACCCTGGTGATGTGGACCTCGTCCGAAACCCAGGCGGCGGCGTTCTCGAACCCGGACTTCCTCAGCCAGGGCGACA TCACCCGCCTGGTCGCGGCCAAGGCGCTGATGGGGCCGCAGACGACGAGCTGCGCCGTGCCCAAGGAGGTGCTGGACGCC GCGCCCCAGGCCATGTTCCAGCTCGCGGCCTACGGCGGCGAGGCCAACTTCGTCCATCCGCCCCGGCCGCAGGACCCCAA GGTCGCCTGGAACCAGGAGTGGGCCGTGAAGGTCCGCTACCGCTCGGCCACGGGCGGGATGCTGGGGACCCCGATGCCGG GCATGGCCGACGCGGAAGACGCGGGCGAGGCGCGCCCGGGCGCGCCGGCGCCGAAGAAGGATCCGAAGGCCGAGCGCCGC CGGGCGATCATGAAGGGCCTCGGCGGGGCGCTGGGCGTGCCGATCCCCTGA
Upstream 100 bases:
>100_bases GCCGCCTCATGGTCGGATGCTAAGGTTCCCTGCTGGCGGGACCTTCCGGCCTGACGCGACCGCTGTTAGACGAATCTCGC TGTCCAGGAGTGAGATCGAC
Downstream 100 bases:
>100_bases AGGTTCTTGAGGGCGCGCCGCCTCAGTAGGCGCGCACGTACCAGTCGTCGACGTTCGACAGCGCCTCGAACTTGCGCCGG TAGCCCTTCGACGAGAGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MACASRLALAAGVAVLGTTASAQTQQKVTGPVATYWMSASTQTGFGMPGAGGQPDPSAIMRQMMGGGGAQKSLVLQLGSS QASPAPAADHLPPPALQAGARLPLLTPRQVPATRDEDETPEVPREYQKPRGKMLVFWGCGERARPGQPYVIDFAKMAEGK QNPAGLFKGLDYRPMRPPAPGRNRTYGEWPNEKTRDLVPSAGSLVGAHTVRGNYAPEINFTLGREQDFLAPLVLTTNQKA PGGWANLAWNPVPQARAYYASAMGGDGETLVMWTSSETQAAAFSNPDFLSQGDITRLVAAKALMGPQTTSCAVPKEVLDA APQAMFQLAAYGGEANFVHPPRPQDPKVAWNQEWAVKVRYRSATGGMLGTPMPGMADAEDAGEARPGAPAPKKDPKAERR RAIMKGLGGALGVPIP
Sequences:
>Translated_416_residues MACASRLALAAGVAVLGTTASAQTQQKVTGPVATYWMSASTQTGFGMPGAGGQPDPSAIMRQMMGGGGAQKSLVLQLGSS QASPAPAADHLPPPALQAGARLPLLTPRQVPATRDEDETPEVPREYQKPRGKMLVFWGCGERARPGQPYVIDFAKMAEGK QNPAGLFKGLDYRPMRPPAPGRNRTYGEWPNEKTRDLVPSAGSLVGAHTVRGNYAPEINFTLGREQDFLAPLVLTTNQKA PGGWANLAWNPVPQARAYYASAMGGDGETLVMWTSSETQAAAFSNPDFLSQGDITRLVAAKALMGPQTTSCAVPKEVLDA APQAMFQLAAYGGEANFVHPPRPQDPKVAWNQEWAVKVRYRSATGGMLGTPMPGMADAEDAGEARPGAPAPKKDPKAERR RAIMKGLGGALGVPIP >Mature_415_residues ACASRLALAAGVAVLGTTASAQTQQKVTGPVATYWMSASTQTGFGMPGAGGQPDPSAIMRQMMGGGGAQKSLVLQLGSSQ ASPAPAADHLPPPALQAGARLPLLTPRQVPATRDEDETPEVPREYQKPRGKMLVFWGCGERARPGQPYVIDFAKMAEGKQ NPAGLFKGLDYRPMRPPAPGRNRTYGEWPNEKTRDLVPSAGSLVGAHTVRGNYAPEINFTLGREQDFLAPLVLTTNQKAP GGWANLAWNPVPQARAYYASAMGGDGETLVMWTSSETQAAAFSNPDFLSQGDITRLVAAKALMGPQTTSCAVPKEVLDAA PQAMFQLAAYGGEANFVHPPRPQDPKVAWNQEWAVKVRYRSATGGMLGTPMPGMADAEDAGEARPGAPAPKKDPKAERRR AIMKGLGGALGVPIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43891; Mature: 43760
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACASRLALAAGVAVLGTTASAQTQQKVTGPVATYWMSASTQTGFGMPGAGGQPDPSAIM CCHHHHHHHHHHHHHEECCCCHHHHHHHCCCHHEEEECCCCCCCCCCCCCCCCCCHHHHH RQMMGGGGAQKSLVLQLGSSQASPAPAADHLPPPALQAGARLPLLTPRQVPATRDEDETP HHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC EVPREYQKPRGKMLVFWGCGERARPGQPYVIDFAKMAEGKQNPAGLFKGLDYRPMRPPAP CCCHHHHCCCCCEEEEECCCCCCCCCCCEEEEHHHHHCCCCCHHHHHCCCCCCCCCCCCC GRNRTYGEWPNEKTRDLVPSAGSLVGAHTVRGNYAPEINFTLGREQDFLAPLVLTTNQKA CCCCCCCCCCCCHHHHHCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCEEEEEECCCCC PGGWANLAWNPVPQARAYYASAMGGDGETLVMWTSSETQAAAFSNPDFLSQGDITRLVAA CCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH KALMGPQTTSCAVPKEVLDAAPQAMFQLAAYGGEANFVHPPRPQDPKVAWNQEWAVKVRY HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCEEEEEEE RSATGGMLGTPMPGMADAEDAGEARPGAPAPKKDPKAERRRAIMKGLGGALGVPIP ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure ACASRLALAAGVAVLGTTASAQTQQKVTGPVATYWMSASTQTGFGMPGAGGQPDPSAIM CHHHHHHHHHHHHHEECCCCHHHHHHHCCCHHEEEECCCCCCCCCCCCCCCCCCHHHHH RQMMGGGGAQKSLVLQLGSSQASPAPAADHLPPPALQAGARLPLLTPRQVPATRDEDETP HHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC EVPREYQKPRGKMLVFWGCGERARPGQPYVIDFAKMAEGKQNPAGLFKGLDYRPMRPPAP CCCHHHHCCCCCEEEEECCCCCCCCCCCEEEEHHHHHCCCCCHHHHHCCCCCCCCCCCCC GRNRTYGEWPNEKTRDLVPSAGSLVGAHTVRGNYAPEINFTLGREQDFLAPLVLTTNQKA CCCCCCCCCCCCHHHHHCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCEEEEEECCCCC PGGWANLAWNPVPQARAYYASAMGGDGETLVMWTSSETQAAAFSNPDFLSQGDITRLVAA CCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH KALMGPQTTSCAVPKEVLDAAPQAMFQLAAYGGEANFVHPPRPQDPKVAWNQEWAVKVRY HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCEEEEEEE RSATGGMLGTPMPGMADAEDAGEARPGAPAPKKDPKAERRRAIMKGLGGALGVPIP ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA