Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is dmpA

Identifier: 197103913

GI number: 197103913

Start: 453202

End: 454224

Strand: Direct

Name: dmpA

Synonym: PHZ_c0447

Alternate gene names: NA

Gene position: 453202-454224 (Clockwise)

Preceding gene: 197103911

Following gene: 197103914

Centisome position: 11.34

GC content: 78.59

Gene sequence:

>1023_bases
ATGGCCGAGATGCGTCCGGGGCCGGGGCCCCGCAACCTGATCACCGACGTGCCGGGCCTGAGTGTCGGGCAGGCGCAGGA
CGCGCCCGCCCGCACGGGCGTGACCGTCATCCTGCCCGACGACCGCGCGGTCTGCGCCGTGGACGTGCGCGGCGGCGCGC
CCGGCACTCGCGAGACGGACGCCCTCGCGCCCGAGAACCTGGTCGAGGCGGTGGACGCCGTCGTGCTGTCGGGGGGCTCG
GTCTACGGCCTGGCCGCGGCCGACGGGGTGGTGGCCTGGCTGGGGGCGCAGGGGCGGGGCTACGGGCTCGTGCCCGGCGT
GCCGCCCTCGCCCGTCGTGCCGGCGGCGATCCTGTTCGACATGGCCAACGGCGGCGACAAGGCCTGGGGCGAGGCGCCCC
CCTATCGCGACCTCGGGCGCGCCGCCGCCTCCGCGGCCGGCCCGGACTTCGCCCTCGGCACGGCGGGCGCGGGGTACGGC
GCCATGGCCGGGACGCTGAAGGGCGGCGTGGGCTCGGCCTCGGTGGTCTCGGCGGACGGATTCACGGTGGGCGCGCTGGC
GGCGGTCAACTGCTGGGGCTCGGTGACGGCGCCCGGCGGGCGCACGTTCTGGGCCGCGCCCTACGAGCTGGACGGGGAGT
TCGGCGGCCTGGGGCCGGCCGGCCTCGTCGCCGGCCCGGACGACTGGGGCCTCGCCAAGCGCCCGCCCCAGGCGCGCAAC
ACGACCATCGCCTGCGTGGCGACCGACGCGGCCCTGACCCCGGCCCAGGCCAAGCGGCTGGCGGTGATGGCCCAGGACGG
CCTCGCCCGCGCCATCCGCCCCGTCCATGCGCCGTTCGACGGCGACGTGGTGTTCGCCCTGGCCACCGGCCGGCGGCCGC
TCGAGGCGCCGGCGGACTACGTGGTGGCGCGGCTGGGCGCGCTGGCGGCCGACGCCCTGGCGCGCGCCGTCGCCCGCGGC
GTGTTCGCGGCCGCCTCATGGTCGGATGCTAAGGTTCCCTGCTGGCGGGACCTTCCGGCCTGA

Upstream 100 bases:

>100_bases
TTGCGGATCACGGACGGGAACACTCCGGCGGCGGGATGGCGGGCGACCATAGCGGCGCCGGGCCGTGGACAACAGCCGCC
GGCGCGTGCGAGGTCGCCTC

Downstream 100 bases:

>100_bases
CGCGACCGCTGTTAGACGAATCTCGCTGTCCAGGAGTGAGATCGACATGGCTTGCGCATCCAGACTGGCCCTCGCCGCGG
GCGTCGCGGTCCTCGGGACC

Product: peptidase S58, DmpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MAEMRPGPGPRNLITDVPGLSVGQAQDAPARTGVTVILPDDRAVCAVDVRGGAPGTRETDALAPENLVEAVDAVVLSGGS
VYGLAAADGVVAWLGAQGRGYGLVPGVPPSPVVPAAILFDMANGGDKAWGEAPPYRDLGRAAASAAGPDFALGTAGAGYG
AMAGTLKGGVGSASVVSADGFTVGALAAVNCWGSVTAPGGRTFWAAPYELDGEFGGLGPAGLVAGPDDWGLAKRPPQARN
TTIACVATDAALTPAQAKRLAVMAQDGLARAIRPVHAPFDGDVVFALATGRRPLEAPADYVVARLGALAADALARAVARG
VFAAASWSDAKVPCWRDLPA

Sequences:

>Translated_340_residues
MAEMRPGPGPRNLITDVPGLSVGQAQDAPARTGVTVILPDDRAVCAVDVRGGAPGTRETDALAPENLVEAVDAVVLSGGS
VYGLAAADGVVAWLGAQGRGYGLVPGVPPSPVVPAAILFDMANGGDKAWGEAPPYRDLGRAAASAAGPDFALGTAGAGYG
AMAGTLKGGVGSASVVSADGFTVGALAAVNCWGSVTAPGGRTFWAAPYELDGEFGGLGPAGLVAGPDDWGLAKRPPQARN
TTIACVATDAALTPAQAKRLAVMAQDGLARAIRPVHAPFDGDVVFALATGRRPLEAPADYVVARLGALAADALARAVARG
VFAAASWSDAKVPCWRDLPA
>Mature_339_residues
AEMRPGPGPRNLITDVPGLSVGQAQDAPARTGVTVILPDDRAVCAVDVRGGAPGTRETDALAPENLVEAVDAVVLSGGSV
YGLAAADGVVAWLGAQGRGYGLVPGVPPSPVVPAAILFDMANGGDKAWGEAPPYRDLGRAAASAAGPDFALGTAGAGYGA
MAGTLKGGVGSASVVSADGFTVGALAAVNCWGSVTAPGGRTFWAAPYELDGEFGGLGPAGLVAGPDDWGLAKRPPQARNT
TIACVATDAALTPAQAKRLAVMAQDGLARAIRPVHAPFDGDVVFALATGRRPLEAPADYVVARLGALAADALARAVARGV
FAAASWSDAKVPCWRDLPA

Specific function: Unknown

COG id: COG3191

COG function: function code EQ; L-aminopeptidase/D-esterase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv1333 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016117
- InterPro:   IPR005321 [H]

Pfam domain/function: PF03576 Peptidase_S58 [H]

EC number: NA

Molecular weight: Translated: 33849; Mature: 33717

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEMRPGPGPRNLITDVPGLSVGQAQDAPARTGVTVILPDDRAVCAVDVRGGAPGTRETD
CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCC
ALAPENLVEAVDAVVLSGGSVYGLAAADGVVAWLGAQGRGYGLVPGVPPSPVVPAAILFD
CCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHEEE
MANGGDKAWGEAPPYRDLGRAAASAAGPDFALGTAGAGYGAMAGTLKGGVGSASVVSADG
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHCCCCCCCEEEECCC
FTVGALAAVNCWGSVTAPGGRTFWAAPYELDGEFGGLGPAGLVAGPDDWGLAKRPPQARN
CEEHHHHHHHCCCCEECCCCCEEEECCCEECCCCCCCCCCCCEECCCCCCCCCCCCCCCC
TTIACVATDAALTPAQAKRLAVMAQDGLARAIRPVHAPFDGDVVFALATGRRPLEAPADY
CEEEEEECCCCCCHHHHHHEEEEHHCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHH
VVARLGALAADALARAVARGVFAAASWSDAKVPCWRDLPA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AEMRPGPGPRNLITDVPGLSVGQAQDAPARTGVTVILPDDRAVCAVDVRGGAPGTRETD
CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCC
ALAPENLVEAVDAVVLSGGSVYGLAAADGVVAWLGAQGRGYGLVPGVPPSPVVPAAILFD
CCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHEEE
MANGGDKAWGEAPPYRDLGRAAASAAGPDFALGTAGAGYGAMAGTLKGGVGSASVVSADG
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHCCCCCCCEEEECCC
FTVGALAAVNCWGSVTAPGGRTFWAAPYELDGEFGGLGPAGLVAGPDDWGLAKRPPQARN
CEEHHHHHHHCCCCEECCCCCEEEECCCEECCCCCCCCCCCCEECCCCCCCCCCCCCCCC
TTIACVATDAALTPAQAKRLAVMAQDGLARAIRPVHAPFDGDVVFALATGRRPLEAPADY
CEEEEEECCCCCCHHHHHHEEEEHHCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHH
VVARLGALAADALARAVARGVFAAASWSDAKVPCWRDLPA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]