| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is dmpA
Identifier: 197103913
GI number: 197103913
Start: 453202
End: 454224
Strand: Direct
Name: dmpA
Synonym: PHZ_c0447
Alternate gene names: NA
Gene position: 453202-454224 (Clockwise)
Preceding gene: 197103911
Following gene: 197103914
Centisome position: 11.34
GC content: 78.59
Gene sequence:
>1023_bases ATGGCCGAGATGCGTCCGGGGCCGGGGCCCCGCAACCTGATCACCGACGTGCCGGGCCTGAGTGTCGGGCAGGCGCAGGA CGCGCCCGCCCGCACGGGCGTGACCGTCATCCTGCCCGACGACCGCGCGGTCTGCGCCGTGGACGTGCGCGGCGGCGCGC CCGGCACTCGCGAGACGGACGCCCTCGCGCCCGAGAACCTGGTCGAGGCGGTGGACGCCGTCGTGCTGTCGGGGGGCTCG GTCTACGGCCTGGCCGCGGCCGACGGGGTGGTGGCCTGGCTGGGGGCGCAGGGGCGGGGCTACGGGCTCGTGCCCGGCGT GCCGCCCTCGCCCGTCGTGCCGGCGGCGATCCTGTTCGACATGGCCAACGGCGGCGACAAGGCCTGGGGCGAGGCGCCCC CCTATCGCGACCTCGGGCGCGCCGCCGCCTCCGCGGCCGGCCCGGACTTCGCCCTCGGCACGGCGGGCGCGGGGTACGGC GCCATGGCCGGGACGCTGAAGGGCGGCGTGGGCTCGGCCTCGGTGGTCTCGGCGGACGGATTCACGGTGGGCGCGCTGGC GGCGGTCAACTGCTGGGGCTCGGTGACGGCGCCCGGCGGGCGCACGTTCTGGGCCGCGCCCTACGAGCTGGACGGGGAGT TCGGCGGCCTGGGGCCGGCCGGCCTCGTCGCCGGCCCGGACGACTGGGGCCTCGCCAAGCGCCCGCCCCAGGCGCGCAAC ACGACCATCGCCTGCGTGGCGACCGACGCGGCCCTGACCCCGGCCCAGGCCAAGCGGCTGGCGGTGATGGCCCAGGACGG CCTCGCCCGCGCCATCCGCCCCGTCCATGCGCCGTTCGACGGCGACGTGGTGTTCGCCCTGGCCACCGGCCGGCGGCCGC TCGAGGCGCCGGCGGACTACGTGGTGGCGCGGCTGGGCGCGCTGGCGGCCGACGCCCTGGCGCGCGCCGTCGCCCGCGGC GTGTTCGCGGCCGCCTCATGGTCGGATGCTAAGGTTCCCTGCTGGCGGGACCTTCCGGCCTGA
Upstream 100 bases:
>100_bases TTGCGGATCACGGACGGGAACACTCCGGCGGCGGGATGGCGGGCGACCATAGCGGCGCCGGGCCGTGGACAACAGCCGCC GGCGCGTGCGAGGTCGCCTC
Downstream 100 bases:
>100_bases CGCGACCGCTGTTAGACGAATCTCGCTGTCCAGGAGTGAGATCGACATGGCTTGCGCATCCAGACTGGCCCTCGCCGCGG GCGTCGCGGTCCTCGGGACC
Product: peptidase S58, DmpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MAEMRPGPGPRNLITDVPGLSVGQAQDAPARTGVTVILPDDRAVCAVDVRGGAPGTRETDALAPENLVEAVDAVVLSGGS VYGLAAADGVVAWLGAQGRGYGLVPGVPPSPVVPAAILFDMANGGDKAWGEAPPYRDLGRAAASAAGPDFALGTAGAGYG AMAGTLKGGVGSASVVSADGFTVGALAAVNCWGSVTAPGGRTFWAAPYELDGEFGGLGPAGLVAGPDDWGLAKRPPQARN TTIACVATDAALTPAQAKRLAVMAQDGLARAIRPVHAPFDGDVVFALATGRRPLEAPADYVVARLGALAADALARAVARG VFAAASWSDAKVPCWRDLPA
Sequences:
>Translated_340_residues MAEMRPGPGPRNLITDVPGLSVGQAQDAPARTGVTVILPDDRAVCAVDVRGGAPGTRETDALAPENLVEAVDAVVLSGGS VYGLAAADGVVAWLGAQGRGYGLVPGVPPSPVVPAAILFDMANGGDKAWGEAPPYRDLGRAAASAAGPDFALGTAGAGYG AMAGTLKGGVGSASVVSADGFTVGALAAVNCWGSVTAPGGRTFWAAPYELDGEFGGLGPAGLVAGPDDWGLAKRPPQARN TTIACVATDAALTPAQAKRLAVMAQDGLARAIRPVHAPFDGDVVFALATGRRPLEAPADYVVARLGALAADALARAVARG VFAAASWSDAKVPCWRDLPA >Mature_339_residues AEMRPGPGPRNLITDVPGLSVGQAQDAPARTGVTVILPDDRAVCAVDVRGGAPGTRETDALAPENLVEAVDAVVLSGGSV YGLAAADGVVAWLGAQGRGYGLVPGVPPSPVVPAAILFDMANGGDKAWGEAPPYRDLGRAAASAAGPDFALGTAGAGYGA MAGTLKGGVGSASVVSADGFTVGALAAVNCWGSVTAPGGRTFWAAPYELDGEFGGLGPAGLVAGPDDWGLAKRPPQARNT TIACVATDAALTPAQAKRLAVMAQDGLARAIRPVHAPFDGDVVFALATGRRPLEAPADYVVARLGALAADALARAVARGV FAAASWSDAKVPCWRDLPA
Specific function: Unknown
COG id: COG3191
COG function: function code EQ; L-aminopeptidase/D-esterase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv1333 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016117 - InterPro: IPR005321 [H]
Pfam domain/function: PF03576 Peptidase_S58 [H]
EC number: NA
Molecular weight: Translated: 33849; Mature: 33717
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEMRPGPGPRNLITDVPGLSVGQAQDAPARTGVTVILPDDRAVCAVDVRGGAPGTRETD CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCC ALAPENLVEAVDAVVLSGGSVYGLAAADGVVAWLGAQGRGYGLVPGVPPSPVVPAAILFD CCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHEEE MANGGDKAWGEAPPYRDLGRAAASAAGPDFALGTAGAGYGAMAGTLKGGVGSASVVSADG CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHCCCCCCCEEEECCC FTVGALAAVNCWGSVTAPGGRTFWAAPYELDGEFGGLGPAGLVAGPDDWGLAKRPPQARN CEEHHHHHHHCCCCEECCCCCEEEECCCEECCCCCCCCCCCCEECCCCCCCCCCCCCCCC TTIACVATDAALTPAQAKRLAVMAQDGLARAIRPVHAPFDGDVVFALATGRRPLEAPADY CEEEEEECCCCCCHHHHHHEEEEHHCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHH VVARLGALAADALARAVARGVFAAASWSDAKVPCWRDLPA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure AEMRPGPGPRNLITDVPGLSVGQAQDAPARTGVTVILPDDRAVCAVDVRGGAPGTRETD CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCC ALAPENLVEAVDAVVLSGGSVYGLAAADGVVAWLGAQGRGYGLVPGVPPSPVVPAAILFD CCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHEEE MANGGDKAWGEAPPYRDLGRAAASAAGPDFALGTAGAGYGAMAGTLKGGVGSASVVSADG CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHCCCCCCCEEEECCC FTVGALAAVNCWGSVTAPGGRTFWAAPYELDGEFGGLGPAGLVAGPDDWGLAKRPPQARN CEEHHHHHHHCCCCEECCCCCEEEECCCEECCCCCCCCCCCCEECCCCCCCCCCCCCCCC TTIACVATDAALTPAQAKRLAVMAQDGLARAIRPVHAPFDGDVVFALATGRRPLEAPADY CEEEEEECCCCCCHHHHHHEEEEHHCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHH VVARLGALAADALARAVARGVFAAASWSDAKVPCWRDLPA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]