| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is yghU [H]
Identifier: 197103831
GI number: 197103831
Start: 369786
End: 370664
Strand: Direct
Name: yghU [H]
Synonym: PHZ_c0365
Alternate gene names: 197103831
Gene position: 369786-370664 (Clockwise)
Preceding gene: 197103828
Following gene: 197103834
Centisome position: 9.25
GC content: 69.06
Gene sequence:
>879_bases ATGGCCGATGACGCCGCCTACGTCCCGCCGAAGGTCTGGACCTGGAACAAGGCCAACGGCGGCCGGTTCGCCAACATCAA CCGCCCGGTCGCCGGCCCGACGCACGACAAGGAGCTGCCGGTCGGCCGCCATCCGCTGCAGCTCTATTCGCTGGCCACGC CCAATGGGGTGAAGGTCACCGTCATGCTGGAGGAGTTGCTGGCCGCCGGCCATCCGGGCGCCGAGTACGACGCCTGGCTG ATCACGATCGGCGAGGGCGACCAGTTCGGCTCGGGCTTCGTCGAGGTGAACCCCAACTCGAAGATCCCGGCCCTGATGGA CCGCAGCGGCCCCGAGCCGGTGCGGGTGTTCGAATCCGGCTCGATCCTGCTCTACCTGGCCGAGAAGTTCGGCGCCTTCC TGCCCAAGGACCACAAGGGCCGCACCGAGGCGCTGAACTGGCTCTTCTGGCAGATGGGCAGCGCGCCCTACCTCGGCGGC GGCTTCGGCCACTTCTACGCCTACGCGCCGGTGAAGATCGAATACGCCATCGACCGCTTCGCCATGGAGGTGAAGCGCCA GCTGGACGTCCTGGACCGCCACCTGGCCGAGCACGAGTACATGGCCGGCCAGGAGTACTCGATCGCCGACATGGCGATCT GGCCCTGGTACGGCGCCCTGGTGAAGGGCCTCGTCTACGACGCCGCCGAGTTCCTCTCGGCCGACGAGTACAGGAACGTC CAGCGCTGGACCGACCAGGTCGCCGCCCGCCCGGCGGTGAAGCGCGGCCGGATGGTCAACCGCACCTGGGGCGAGCCGGC CAGCCAGCTTCCCGAGCGGCACGAGGCCTCGGACTTCGAGACCAAGACCGGGGACAAGACGGGCGCGGCCGCGAGCTGA
Upstream 100 bases:
>100_bases GCGGTTCCGCTCGCCTCAAGCGAAGGGCTGGCGAAACCGGCCCGCCTGGGCCACATCGGAGGGGCGCCCGGCCCGGGCGC CAGCGCTGGAGGAGCCGCAC
Downstream 100 bases:
>100_bases GGGCCGGTCAGGCCTCCCGGCGGCGGATCGTCCCTTCGACGGGCGCCGCCGCCGAGACCGTATTGAAGATGGTCCCGTAC TTTCGCACGTTGGTGTGCAG
Product: putative glutathione S-transferase YghU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MADDAAYVPPKVWTWNKANGGRFANINRPVAGPTHDKELPVGRHPLQLYSLATPNGVKVTVMLEELLAAGHPGAEYDAWL ITIGEGDQFGSGFVEVNPNSKIPALMDRSGPEPVRVFESGSILLYLAEKFGAFLPKDHKGRTEALNWLFWQMGSAPYLGG GFGHFYAYAPVKIEYAIDRFAMEVKRQLDVLDRHLAEHEYMAGQEYSIADMAIWPWYGALVKGLVYDAAEFLSADEYRNV QRWTDQVAARPAVKRGRMVNRTWGEPASQLPERHEASDFETKTGDKTGAAAS
Sequences:
>Translated_292_residues MADDAAYVPPKVWTWNKANGGRFANINRPVAGPTHDKELPVGRHPLQLYSLATPNGVKVTVMLEELLAAGHPGAEYDAWL ITIGEGDQFGSGFVEVNPNSKIPALMDRSGPEPVRVFESGSILLYLAEKFGAFLPKDHKGRTEALNWLFWQMGSAPYLGG GFGHFYAYAPVKIEYAIDRFAMEVKRQLDVLDRHLAEHEYMAGQEYSIADMAIWPWYGALVKGLVYDAAEFLSADEYRNV QRWTDQVAARPAVKRGRMVNRTWGEPASQLPERHEASDFETKTGDKTGAAAS >Mature_291_residues ADDAAYVPPKVWTWNKANGGRFANINRPVAGPTHDKELPVGRHPLQLYSLATPNGVKVTVMLEELLAAGHPGAEYDAWLI TIGEGDQFGSGFVEVNPNSKIPALMDRSGPEPVRVFESGSILLYLAEKFGAFLPKDHKGRTEALNWLFWQMGSAPYLGGG FGHFYAYAPVKIEYAIDRFAMEVKRQLDVLDRHLAEHEYMAGQEYSIADMAIWPWYGALVKGLVYDAAEFLSADEYRNVQ RWTDQVAARPAVKRGRMVNRTWGEPASQLPERHEASDFETKTGDKTGAAAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI87082195, Length=283, Percent_Identity=72.791519434629, Blast_Score=429, Evalue=1e-121, Organism=Escherichia coli, GI1788640, Length=213, Percent_Identity=41.3145539906103, Blast_Score=153, Evalue=2e-38, Organism=Escherichia coli, GI87081789, Length=186, Percent_Identity=29.0322580645161, Blast_Score=64, Evalue=9e-12, Organism=Saccharomyces cerevisiae, GI6324100, Length=256, Percent_Identity=29.296875, Blast_Score=93, Evalue=6e-20, Organism=Drosophila melanogaster, GI28571670, Length=178, Percent_Identity=28.6516853932584, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI17864592, Length=204, Percent_Identity=28.4313725490196, Blast_Score=72, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 32446; Mature: 32315
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADDAAYVPPKVWTWNKANGGRFANINRPVAGPTHDKELPVGRHPLQLYSLATPNGVKVT CCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEE VMLEELLAAGHPGAEYDAWLITIGEGDQFGSGFVEVNPNSKIPALMDRSGPEPVRVFESG EEHHHHHHCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCHHHCCCCCCCEEEEECC SILLYLAEKFGAFLPKDHKGRTEALNWLFWQMGSAPYLGGGFGHFYAYAPVKIEYAIDRF CEEEEEEHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHEEEECCEEEEHHHHHH AMEVKRQLDVLDRHLAEHEYMAGQEYSIADMAIWPWYGALVKGLVYDAAEFLSADEYRNV HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHCCHHHHHH QRWTDQVAARPAVKRGRMVNRTWGEPASQLPERHEASDFETKTGDKTGAAAS HHHHHHHHHCHHHHHCCEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ADDAAYVPPKVWTWNKANGGRFANINRPVAGPTHDKELPVGRHPLQLYSLATPNGVKVT CCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEE VMLEELLAAGHPGAEYDAWLITIGEGDQFGSGFVEVNPNSKIPALMDRSGPEPVRVFESG EEHHHHHHCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCHHHCCCCCCCEEEEECC SILLYLAEKFGAFLPKDHKGRTEALNWLFWQMGSAPYLGGGFGHFYAYAPVKIEYAIDRF CEEEEEEHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHEEEECCEEEEHHHHHH AMEVKRQLDVLDRHLAEHEYMAGQEYSIADMAIWPWYGALVKGLVYDAAEFLSADEYRNV HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHCCHHHHHH QRWTDQVAARPAVKRGRMVNRTWGEPASQLPERHEASDFETKTGDKTGAAAS HHHHHHHHHCHHHHHCCEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]