| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197103820
Identifier: 197103820
GI number: 197103820
Start: 359458
End: 360231
Strand: Direct
Name: 197103820
Synonym: PHZ_c0354
Alternate gene names: NA
Gene position: 359458-360231 (Clockwise)
Preceding gene: 197103819
Following gene: 197103821
Centisome position: 8.99
GC content: 70.41
Gene sequence:
>774_bases ATGACGCGCAGGATCCCTTTCGAAGGCATCGAGAACTTCCGCGACTTCGGCGACTACGCCGCGGGCGGGCGGCGGCTGAG GCGGGGGATGCTCTACCGCTCGGCGCACCAGGCCGAGGCGACGGACGCGGATCTCCGGAGGCTGGCCGAGCTGGGCCTGG CGGTGATCGTCGACCTGCGGCGCAGCAACGAGCGGCAGAGCCAGCCCTCGCGCCGGTGGGAGGGCTTCGCCGCCCAGGTG ATCGAGAACGACATCGGCCAGGAACACGCCGACGAGTGGCATACGTTCATCGAGAGCTCGGACCTGACCGCGGCCTCGTT CCACGCCTACATGATCGACTACTACCAGGGCGCGCCGCTCGCCCGGCGGCACATCGACCTCTACAGCCGCTACTTCCACA CCCTGGCCGAAACCGAGGGCGCGGTGCTGGTGCACTGCGCGGCGGGGAAGGACCGGACCGGAATCCTCTGCGCGCTGACC CACCACCTGGCCGGGGTGCACGACGACGACATCGTGGAGGACTACCTGCTGACCAACGATCCGGTGCGGATGGAGAAGCG GCTGCCGACGATCCGCGCGCGCATCGCCGAGGCCACCGGCCGGACGCCGGACGATGCGGCCCTGATGACGGCGATGCGGG TCGAGGCCGAGTACCTGGAGACCGCCTTCGCGGCCATGCGCGACCGCTACGGTTCGCTGGACGGCTATCTGGAGCAGGAG CTGGGGCTGACGGGCGCGCTGCGCGAGCGGCTGCACGACCGCCTGCTGGGGTGA
Upstream 100 bases:
>100_bases TCGCGCAAGCTGCGCAGCTTCGACGAGCCGCCGTTCCGGTAGGAGGCGGCCGTGCCGGCCGTCTCGATTCCGCCACCGGG TCGGGGTAGAGGCTGGAGCC
Downstream 100 bases:
>100_bases TCCCGGAGTCCCTAAGCGGAGTCCCTAACGCCCGCCGCAGCCTCCGCAAACCGCGACGGGCGCCTCAGGGACAGACCTCA AGAGAAGCCTGAGACGACTG
Product: protein tyrosine/serine phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MTRRIPFEGIENFRDFGDYAAGGRRLRRGMLYRSAHQAEATDADLRRLAELGLAVIVDLRRSNERQSQPSRRWEGFAAQV IENDIGQEHADEWHTFIESSDLTAASFHAYMIDYYQGAPLARRHIDLYSRYFHTLAETEGAVLVHCAAGKDRTGILCALT HHLAGVHDDDIVEDYLLTNDPVRMEKRLPTIRARIAEATGRTPDDAALMTAMRVEAEYLETAFAAMRDRYGSLDGYLEQE LGLTGALRERLHDRLLG
Sequences:
>Translated_257_residues MTRRIPFEGIENFRDFGDYAAGGRRLRRGMLYRSAHQAEATDADLRRLAELGLAVIVDLRRSNERQSQPSRRWEGFAAQV IENDIGQEHADEWHTFIESSDLTAASFHAYMIDYYQGAPLARRHIDLYSRYFHTLAETEGAVLVHCAAGKDRTGILCALT HHLAGVHDDDIVEDYLLTNDPVRMEKRLPTIRARIAEATGRTPDDAALMTAMRVEAEYLETAFAAMRDRYGSLDGYLEQE LGLTGALRERLHDRLLG >Mature_256_residues TRRIPFEGIENFRDFGDYAAGGRRLRRGMLYRSAHQAEATDADLRRLAELGLAVIVDLRRSNERQSQPSRRWEGFAAQVI ENDIGQEHADEWHTFIESSDLTAASFHAYMIDYYQGAPLARRHIDLYSRYFHTLAETEGAVLVHCAAGKDRTGILCALTH HLAGVHDDDIVEDYLLTNDPVRMEKRLPTIRARIAEATGRTPDDAALMTAMRVEAEYLETAFAAMRDRYGSLDGYLEQEL GLTGALRERLHDRLLG
Specific function: Unknown
COG id: COG2365
COG function: function code T; Protein tyrosine/serine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the protein-tyrosine phosphatase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000387 - InterPro: IPR016130 [H]
Pfam domain/function: NA
EC number: =3.1.3.48 [H]
Molecular weight: Translated: 29151; Mature: 29020
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: PS00383 TYR_PHOSPHATASE_1 ; PS50056 TYR_PHOSPHATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRIPFEGIENFRDFGDYAAGGRRLRRGMLYRSAHQAEATDADLRRLAELGLAVIVDLR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH RSNERQSQPSRRWEGFAAQVIENDIGQEHADEWHTFIESSDLTAASFHAYMIDYYQGAPL HCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCH ARRHIDLYSRYFHTLAETEGAVLVHCAAGKDRTGILCALTHHLAGVHDDDIVEDYLLTND HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCC PVRMEKRLPTIRARIAEATGRTPDDAALMTAMRVEAEYLETAFAAMRDRYGSLDGYLEQE CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH LGLTGALRERLHDRLLG HCCHHHHHHHHHHHHCC >Mature Secondary Structure TRRIPFEGIENFRDFGDYAAGGRRLRRGMLYRSAHQAEATDADLRRLAELGLAVIVDLR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH RSNERQSQPSRRWEGFAAQVIENDIGQEHADEWHTFIESSDLTAASFHAYMIDYYQGAPL HCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCH ARRHIDLYSRYFHTLAETEGAVLVHCAAGKDRTGILCALTHHLAGVHDDDIVEDYLLTND HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCC PVRMEKRLPTIRARIAEATGRTPDDAALMTAMRVEAEYLETAFAAMRDRYGSLDGYLEQE CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH LGLTGALRERLHDRLLG HCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8405966 [H]