| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is amn [H]
Identifier: 197103819
GI number: 197103819
Start: 357951
End: 359399
Strand: Direct
Name: amn [H]
Synonym: PHZ_c0353
Alternate gene names: 197103819
Gene position: 357951-359399 (Clockwise)
Preceding gene: 197103817
Following gene: 197103820
Centisome position: 8.96
GC content: 71.5
Gene sequence:
>1449_bases ATGAAGACGGACGCAGCCGGCATCGTCGATCGGCTGGAAAACGAATATCGCGCGAGCGTCGGCTCGCTCCGCACCGCCCT CAAATCGTTCCTGGCCGGCGGTCCGCCCCCGGACCCGGTCGCCCGGCGCGCCGGCGCCTACGTCTATCCCGAGCTGCGGC TGCGCTGGCCGGAGGGCCGCCCGTATCCCAGGATCAGCCGCGCGTTCGCGCGAATCGGCCTGCCCGGCCGCTATGCGGTG ACGGTGACGCGGCCGGACCTGTTCCGCGGCTACCTGACCGAGCAGCTCACCCTGCTGCAGCAGGACTTCGACGTGGAGCT GGACGTTGGCCGCTCGGCCCAGGAGATCCCGTTCCCCTACGTGCTGGACGGCGCCCGCGACATCGCCCTGGCCGACGTGG GCGCGGCCGAGATCGCCCGGCACTTCCCCTCGACCGAGCTTGCCCACATCGGCGACGAGATCGCCGACGGCGCCTGGCTG ACCCCCGAGGACAGCCCGCGGCCGCTGGCGCTGTTCGACGGTCTGCGCACCGACTTCTCGCTGGCCCGGCTGGCCCACTA CACCGGCACGCCCGCCGAGCACGTGCAGCACTATGTGCTGTTCACCAACTACCATCGCTACGTGGACGAGTTCGTCCGCT GGGGCTGCGAGCAACTGCGGCGGCCGGACAGCCCCTACACGGCGCTGTCGGCGGCGGGCCACGTGATGGTCACCCGCGAG ACGCCCGACCCCGAGGAGACGATCGCCGCCGGGCCGTGGCGCAGGCACCAGATGCCCGCCTACCACCTGATGGCCGAGGG CCGGACGGGGGTGACGCTGGTGAACATCGGCGTCGGCCCGTCGAACGCCAAGACGATCTGCGACCACCTGGCGGTGCTGC GGCCGCAGGCCTGGCTGATGATCGGCCACTGCGGCGGCCTGCGCGGCAGCCAGACGATCGGCGACTACGTTCTGGCCCAC GCCTACCTGCGCGACGATCACGTGCTGGACCGCGTGCTGCCGCGGGAGATCCCGATCCCGCCGATTGCGGAGGTGCAGGT GGCCTTCTTCCGCGCCGCCGAGGCGGTGACCGGCGAATCGGGGGAGGTGCTGAAGCGCCGCCTGCGGACCGGCACGGTGG TGACCACCGACGACCGCAACTGGGAGCTCCGCTACTCGTCCAGCGCCATCCAGTTCAACCAGAGCCGGGCGGTGGCCATC GACATGGAGAGCGCCACCATCGCCGCCCAGGGCTACCGCTTCCGGGTGCCGTACGGGACGCTGCTGTGCGTCTCGGACAA GCCGCTGCACGGCGAGATCAAGCTGCCCGGCCAGGCCAACGCCTTCTACGAGCGGGCCATCGGCCAGCACCTGCAGATCG GCCTGGCGACCGTGGACCTGCTGCGCCAGGAGGGCACGCGCCTGCACTCGCGCAAGCTGCGCAGCTTCGACGAGCCGCCG TTCCGGTAG
Upstream 100 bases:
>100_bases CCGGGCATTTTCGAGAGGCGCCTTTGTCGCGAAGAACCGCCCCACAGTCCAGCGCGGCGGATTCGCAAGCGTCACGGAGG GCGTCTATAAGGCGGCGATG
Downstream 100 bases:
>100_bases GAGGCGGCCGTGCCGGCCGTCTCGATTCCGCCACCGGGTCGGGGTAGAGGCTGGAGCCATGACGCGCAGGATCCCTTTCG AAGGCATCGAGAACTTCCGC
Product: AMP nucleosidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 482; Mature: 482
Protein sequence:
>482_residues MKTDAAGIVDRLENEYRASVGSLRTALKSFLAGGPPPDPVARRAGAYVYPELRLRWPEGRPYPRISRAFARIGLPGRYAV TVTRPDLFRGYLTEQLTLLQQDFDVELDVGRSAQEIPFPYVLDGARDIALADVGAAEIARHFPSTELAHIGDEIADGAWL TPEDSPRPLALFDGLRTDFSLARLAHYTGTPAEHVQHYVLFTNYHRYVDEFVRWGCEQLRRPDSPYTALSAAGHVMVTRE TPDPEETIAAGPWRRHQMPAYHLMAEGRTGVTLVNIGVGPSNAKTICDHLAVLRPQAWLMIGHCGGLRGSQTIGDYVLAH AYLRDDHVLDRVLPREIPIPPIAEVQVAFFRAAEAVTGESGEVLKRRLRTGTVVTTDDRNWELRYSSSAIQFNQSRAVAI DMESATIAAQGYRFRVPYGTLLCVSDKPLHGEIKLPGQANAFYERAIGQHLQIGLATVDLLRQEGTRLHSRKLRSFDEPP FR
Sequences:
>Translated_482_residues MKTDAAGIVDRLENEYRASVGSLRTALKSFLAGGPPPDPVARRAGAYVYPELRLRWPEGRPYPRISRAFARIGLPGRYAV TVTRPDLFRGYLTEQLTLLQQDFDVELDVGRSAQEIPFPYVLDGARDIALADVGAAEIARHFPSTELAHIGDEIADGAWL TPEDSPRPLALFDGLRTDFSLARLAHYTGTPAEHVQHYVLFTNYHRYVDEFVRWGCEQLRRPDSPYTALSAAGHVMVTRE TPDPEETIAAGPWRRHQMPAYHLMAEGRTGVTLVNIGVGPSNAKTICDHLAVLRPQAWLMIGHCGGLRGSQTIGDYVLAH AYLRDDHVLDRVLPREIPIPPIAEVQVAFFRAAEAVTGESGEVLKRRLRTGTVVTTDDRNWELRYSSSAIQFNQSRAVAI DMESATIAAQGYRFRVPYGTLLCVSDKPLHGEIKLPGQANAFYERAIGQHLQIGLATVDLLRQEGTRLHSRKLRSFDEPP FR >Mature_482_residues MKTDAAGIVDRLENEYRASVGSLRTALKSFLAGGPPPDPVARRAGAYVYPELRLRWPEGRPYPRISRAFARIGLPGRYAV TVTRPDLFRGYLTEQLTLLQQDFDVELDVGRSAQEIPFPYVLDGARDIALADVGAAEIARHFPSTELAHIGDEIADGAWL TPEDSPRPLALFDGLRTDFSLARLAHYTGTPAEHVQHYVLFTNYHRYVDEFVRWGCEQLRRPDSPYTALSAAGHVMVTRE TPDPEETIAAGPWRRHQMPAYHLMAEGRTGVTLVNIGVGPSNAKTICDHLAVLRPQAWLMIGHCGGLRGSQTIGDYVLAH AYLRDDHVLDRVLPREIPIPPIAEVQVAFFRAAEAVTGESGEVLKRRLRTGTVVTTDDRNWELRYSSSAIQFNQSRAVAI DMESATIAAQGYRFRVPYGTLLCVSDKPLHGEIKLPGQANAFYERAIGQHLQIGLATVDLLRQEGTRLHSRKLRSFDEPP FR
Specific function: Involved in regulation of AMP concentrations [H]
COG id: COG0775
COG function: function code F; Nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788293, Length=477, Percent_Identity=65.1991614255765, Blast_Score=624, Evalue=1e-180,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011271 - InterPro: IPR018953 - InterPro: IPR018017 - InterPro: IPR000845 [H]
Pfam domain/function: PF10423 AMNp_N; PF01048 PNP_UDP_1 [H]
EC number: =3.2.2.4 [H]
Molecular weight: Translated: 53705; Mature: 53705
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTDAAGIVDRLENEYRASVGSLRTALKSFLAGGPPPDPVARRAGAYVYPELRLRWPEGR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCEEECEEEEECCCCC PYPRISRAFARIGLPGRYAVTVTRPDLFRGYLTEQLTLLQQDFDVELDVGRSAQEIPFPY CCHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCE VLDGARDIALADVGAAEIARHFPSTELAHIGDEIADGAWLTPEDSPRPLALFDGLRTDFS EECCCCCEEEECCCHHHHHHHCCCCHHHHHCHHHCCCCEECCCCCCCCCHHHCCCCCCHH LARLAHYTGTPAEHVQHYVLFTNYHRYVDEFVRWGCEQLRRPDSPYTALSAAGHVMVTRE HHHHHHHCCCCHHHHEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEEEECC TPDPEETIAAGPWRRHQMPAYHLMAEGRTGVTLVNIGVGPSNAKTICDHLAVLRPQAWLM CCCHHHHHCCCCCHHCCCCCEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEE IGHCGGLRGSQTIGDYVLAHAYLRDDHVLDRVLPREIPIPPIAEVQVAFFRAAEAVTGES EEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCC GEVLKRRLRTGTVVTTDDRNWELRYSSSAIQFNQSRAVAIDMESATIAAQGYRFRVPYGT HHHHHHHHHCCCEEEECCCCEEEEECCCEEEECCCCEEEEEECCCEEEECCEEEECCCCE LLCVSDKPLHGEIKLPGQANAFYERAIGQHLQIGLATVDLLRQEGTRLHSRKLRSFDEPP EEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCC FR CC >Mature Secondary Structure MKTDAAGIVDRLENEYRASVGSLRTALKSFLAGGPPPDPVARRAGAYVYPELRLRWPEGR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCEEECEEEEECCCCC PYPRISRAFARIGLPGRYAVTVTRPDLFRGYLTEQLTLLQQDFDVELDVGRSAQEIPFPY CCHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCE VLDGARDIALADVGAAEIARHFPSTELAHIGDEIADGAWLTPEDSPRPLALFDGLRTDFS EECCCCCEEEECCCHHHHHHHCCCCHHHHHCHHHCCCCEECCCCCCCCCHHHCCCCCCHH LARLAHYTGTPAEHVQHYVLFTNYHRYVDEFVRWGCEQLRRPDSPYTALSAAGHVMVTRE HHHHHHHCCCCHHHHEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEEEECC TPDPEETIAAGPWRRHQMPAYHLMAEGRTGVTLVNIGVGPSNAKTICDHLAVLRPQAWLM CCCHHHHHCCCCCHHCCCCCEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEE IGHCGGLRGSQTIGDYVLAHAYLRDDHVLDRVLPREIPIPPIAEVQVAFFRAAEAVTGES EEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCC GEVLKRRLRTGTVVTTDDRNWELRYSSSAIQFNQSRAVAIDMESATIAAQGYRFRVPYGT HHHHHHHHHCCCEEEECCCCEEEEECCCEEEECCCCEEEEEECCCEEEECCEEEECCCCE LLCVSDKPLHGEIKLPGQANAFYERAIGQHLQIGLATVDLLRQEGTRLHSRKLRSFDEPP EEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCC FR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]