| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197103796
Identifier: 197103796
GI number: 197103796
Start: 326382
End: 327008
Strand: Direct
Name: 197103796
Synonym: PHZ_c0330
Alternate gene names: NA
Gene position: 326382-327008 (Clockwise)
Preceding gene: 197103795
Following gene: 197103797
Centisome position: 8.17
GC content: 70.49
Gene sequence:
>627_bases ATGCCCGGAATCCTCGACCGCCGAACCGTCCTGGCCTTCGCCGCCGCCGCGGCGCTCGCGGCGCCCGCCGTCGCGGCCCC GGTCCTCGGCCAGCCGGCCCCCGCCTTCAGCGTCAAGGACGCCGACGGCAAGACGCGCTCCCTGGCCGAGTTCAAGGGCA GGACCGTCGTGCTGGAATGGACCAACGAGGGCTGCCCGTATGTGAAGAAGCACTACGACTCCGGCAACATGCAGCGCCTG CAGTCGCAGGCGGTGAAGGACGGCGCCGTCTGGCTGACGGTCATCTCCTCGGCCCCGGACTTCCAGGGCTACAAGACCGC CGCCGAGGCCAAGGCCTGGAAGGCCAAGGCGGGTGCGGCCTCCACCGCCGTCCTGCTCGATACCACCGGAGTCGTCGGCC GGGCCTACGAGGCCAAGACCACCCCGCACATGTACGTCGTCGATAAGGCGGGCAAGCTCGTCTACATGGGCGGCATCGAC GACAAGGCCTCGGCCGACCCGGCCAGCCTGAAGGGCGCCAAGAACTACGTCGCCGCCGCCCTCGCCGACGTGAAGGCCGG CCGCGCCGTCGCCCAGGCTGCAACCCAACCCTACGGCTGCAGCGTTAAGTACGCCTCGGCCGACTAG
Upstream 100 bases:
>100_bases TCCTTCCAGCCCTCCTGACCGAAGGCCTCGTCGTGCGCGCCATCGACGCCGCCGCGAAGCCGAGCTGACCCCAAGAAGAA ACCTGAAGGGAGCCCTGCCG
Downstream 100 bases:
>100_bases CTTTGCTGCTGAAGGGGGATGCTTGACCGACACCGACGCCGCCGCGTCCTGGCGGGCGCTTGACGCGGCCGGGGAGGCCG CCGCCCAGCGTTCGATCGCG
Product: thiol-disulfide isomerase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MPGILDRRTVLAFAAAAALAAPAVAAPVLGQPAPAFSVKDADGKTRSLAEFKGRTVVLEWTNEGCPYVKKHYDSGNMQRL QSQAVKDGAVWLTVISSAPDFQGYKTAAEAKAWKAKAGAASTAVLLDTTGVVGRAYEAKTTPHMYVVDKAGKLVYMGGID DKASADPASLKGAKNYVAAALADVKAGRAVAQAATQPYGCSVKYASAD
Sequences:
>Translated_208_residues MPGILDRRTVLAFAAAAALAAPAVAAPVLGQPAPAFSVKDADGKTRSLAEFKGRTVVLEWTNEGCPYVKKHYDSGNMQRL QSQAVKDGAVWLTVISSAPDFQGYKTAAEAKAWKAKAGAASTAVLLDTTGVVGRAYEAKTTPHMYVVDKAGKLVYMGGID DKASADPASLKGAKNYVAAALADVKAGRAVAQAATQPYGCSVKYASAD >Mature_207_residues PGILDRRTVLAFAAAAALAAPAVAAPVLGQPAPAFSVKDADGKTRSLAEFKGRTVVLEWTNEGCPYVKKHYDSGNMQRLQ SQAVKDGAVWLTVISSAPDFQGYKTAAEAKAWKAKAGAASTAVLLDTTGVVGRAYEAKTTPHMYVVDKAGKLVYMGGIDD KASADPASLKGAKNYVAAALADVKAGRAVAQAATQPYGCSVKYASAD
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21525; Mature: 21393
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGILDRRTVLAFAAAAALAAPAVAAPVLGQPAPAFSVKDADGKTRSLAEFKGRTVVLEW CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHCCCEEEEEE TNEGCPYVKKHYDSGNMQRLQSQAVKDGAVWLTVISSAPDFQGYKTAAEAKAWKAKAGAA CCCCCCHHHHHCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCC STAVLLDTTGVVGRAYEAKTTPHMYVVDKAGKLVYMGGIDDKASADPASLKGAKNYVAAA CEEEEEECCCCCCCCEECCCCCEEEEEECCCCEEEECCCCCCCCCCCHHHCCHHHHHHHH LADVKAGRAVAQAATQPYGCSVKYASAD HHHHHHHHHHHHHCCCCCCCEEEECCCC >Mature Secondary Structure PGILDRRTVLAFAAAAALAAPAVAAPVLGQPAPAFSVKDADGKTRSLAEFKGRTVVLEW CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHCCCEEEEEE TNEGCPYVKKHYDSGNMQRLQSQAVKDGAVWLTVISSAPDFQGYKTAAEAKAWKAKAGAA CCCCCCHHHHHCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCC STAVLLDTTGVVGRAYEAKTTPHMYVVDKAGKLVYMGGIDDKASADPASLKGAKNYVAAA CEEEEEECCCCCCCCEECCCCCEEEEEECCCCEEEECCCCCCCCCCCHHHCCHHHHHHHH LADVKAGRAVAQAATQPYGCSVKYASAD HHHHHHHHHHHHHCCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA