| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197103782
Identifier: 197103782
GI number: 197103782
Start: 307677
End: 309479
Strand: Direct
Name: 197103782
Synonym: PHZ_c0316
Alternate gene names: NA
Gene position: 307677-309479 (Clockwise)
Preceding gene: 197103781
Following gene: 197103784
Centisome position: 7.7
GC content: 67.72
Gene sequence:
>1803_bases ATGAAATCCATGCTTATGGCCGCCGCCGCGGCGGCCGTGCTCGTGGCCGCCGGACCTTCGGCCGCCCAGACGGCGAAGCC GACGGCGGCCGAGGCCAAGGCCTTCGTCGAGAACGCCGAGGCCCAGATCGAGAAGGCCAACGCCTTCGCCGCCCGCGCCG CCTGGGTGCGGGCCAACTTCATCACCGAAGACACCCAGTGGCTCGAGGCCAAGGCGTCGGCCGAGCAGAACGAACTGGCG ACCCGCTTCGCCATGGAGGCCGCCCGCTTCGACGGCGTGCCGGTGGACGCGGTCACCGCCCGCAAGCTGAAGCTGCTGAA GCTCTATCTGGTCTCGCCGGCCCCCAACCGCCCCGGCGCGGCCGAGGAGCTGGCGAACCTGCTGACCAAGCTCGATTCCA CCTATTCGACCGGCAAGTTCGAGTTCAAGGGCAAGCAGATCACCCTGAACGACGCCGAGGACGTGCTGCGCTCCAGCCGC GATCCGGCCGAGCTGAAGGCGGTCTGGGAGGGCTGGCGCACCGTCTCGCCGCAGATGCGCGCCGACTACGCCACCTTCGC GGGGCTCTCCAACGAGGGCGCCAAGAGCCTGGGCTTCAAGGACACCGGCGCGCTGTGGCGGTCCAACTACGACATGGATC CCGACGCCTTCGCCGCCGAGACCGACCGGCTGTGGAAGCAGGTGGAGCCGTTCTACCGCAACCTGCACTGCTACGTGCGG GCCCGGCTCAACGACCAGTACGGCGACGCCGTCCAGCCGCGCACCGGCCCGATCCGCGCCGACCTCCTGGGCAACATGTG GGCCCAGCAGTGGGGCAACATCTACGACATCGTCCAGCCGAAGGGCGTGACCTCCAGCTACGACCTCAACAAGCTGCTGG TCGAGAAGGGCTACGACCCGGTCAAGATGGTGAAGACCGGCGAGAACTTCTATTCCTCGCTCGGCTTCGCGCCGCTGCCG GAGACGTTCTGGAACCGCTCGCTGATCACCCGTCCGCGCGACCGAGAGGTCGTCTGCCACGCCTCGGCCTGGAACCTCGA CGACAAGGACGACATCCGCATCAAGATGTGCACCAAGGTGAACGCGGAGGACTTCTCCACCGTCCACCACGAGCTCGGCC ACAACTACTACCAGCGGGCCTACAAGGATCAGCCGGTGCTGTTCCGGAACGGGGCCAATGACGGCTTCCACGAGGCCATC GGCGACTTCGCGGCCCTGTCGGCCTCGACGCCGACCTACCTCAACCAGATCGGCCTGCTGGAGAAGGTCCCCGGCGCGGA CGAGGACATCCCGTTCCTGCTCAAGATGGCGCTCGACAAGATCGCCTTCCTGCCCTTCGGCCTGCTGGTCGACCGCTGGC GCTGGCAGGTGTTCTCGGGCGAGACCACGCCCGAGGAGTACAACGCCGACTGGTGGAAGCTGCGCCTGCAGTACCAGGGC CTGATGCCGCCGGCGCAGCGGCCGGCCGACGCCTTCGATCCCGGCGCCAAGTACCACGTGCCCGGCAACACGCCGTACAC CCGCTACTTCCTGGCCCACATCTACCAGTTCCAGTTCCACCGGGCCGCCTGCCAGCAGGCCGGCTGGAAGGGCCCGCTGC ACCGCTGCTCCGTCTACGGACAGAAGGAGATGGGCGAGCGGTTCAACCGGATGATGGAGCTGGGCCAGTCGCAGCCGTGG CCGCAGACGCTGAAGGTCTTCACCGGCGAGACCCGCACCGACGCGAGCGCCGTGGCCGACTACTTCAAGCCCCTGAACAC CTGGCTCGTCCAGCAGAACAAGGGCGAGAACTGCGGGTGGTAG
Upstream 100 bases:
>100_bases GCCTGGCCTGAGCTCCGCCGCGCGCTTGACGGGCGGGGCGGGGGCGGCTTGTGTCGCCCCCAACGGCGGGAACGCCGATG AAAACGCTCAGGAACCGTCC
Downstream 100 bases:
>100_bases ATTCGCGATCCTTCTCCCCATGTGGGAGAAGGTGTCGGCCACAGGCTGACGAATGAGGGGTCGGACCGCGGGCGCGGCCC CTTCGTCATTTGTCGGGGGC
Product: zinc-dependent metallopeptidase
Products: NA
Alternate protein names: Zinc-Dependent Metallopeptidase; Angiotensin-Converting; Dipeptidyl Carboxypeptidase; Angiotensin-Converting Family Protein; Dipeptidyl Carboxydipeptidase Family; Zinc Metallopeptidase Family Protein; Angiotensin-Converting Peptidyl Dipeptidase Protein; Peptidyl-Dipeptidase Dcp; Dipeptidyl Carboxydipeptidase Family Protein
Number of amino acids: Translated: 600; Mature: 600
Protein sequence:
>600_residues MKSMLMAAAAAAVLVAAGPSAAQTAKPTAAEAKAFVENAEAQIEKANAFAARAAWVRANFITEDTQWLEAKASAEQNELA TRFAMEAARFDGVPVDAVTARKLKLLKLYLVSPAPNRPGAAEELANLLTKLDSTYSTGKFEFKGKQITLNDAEDVLRSSR DPAELKAVWEGWRTVSPQMRADYATFAGLSNEGAKSLGFKDTGALWRSNYDMDPDAFAAETDRLWKQVEPFYRNLHCYVR ARLNDQYGDAVQPRTGPIRADLLGNMWAQQWGNIYDIVQPKGVTSSYDLNKLLVEKGYDPVKMVKTGENFYSSLGFAPLP ETFWNRSLITRPRDREVVCHASAWNLDDKDDIRIKMCTKVNAEDFSTVHHELGHNYYQRAYKDQPVLFRNGANDGFHEAI GDFAALSASTPTYLNQIGLLEKVPGADEDIPFLLKMALDKIAFLPFGLLVDRWRWQVFSGETTPEEYNADWWKLRLQYQG LMPPAQRPADAFDPGAKYHVPGNTPYTRYFLAHIYQFQFHRAACQQAGWKGPLHRCSVYGQKEMGERFNRMMELGQSQPW PQTLKVFTGETRTDASAVADYFKPLNTWLVQQNKGENCGW
Sequences:
>Translated_600_residues MKSMLMAAAAAAVLVAAGPSAAQTAKPTAAEAKAFVENAEAQIEKANAFAARAAWVRANFITEDTQWLEAKASAEQNELA TRFAMEAARFDGVPVDAVTARKLKLLKLYLVSPAPNRPGAAEELANLLTKLDSTYSTGKFEFKGKQITLNDAEDVLRSSR DPAELKAVWEGWRTVSPQMRADYATFAGLSNEGAKSLGFKDTGALWRSNYDMDPDAFAAETDRLWKQVEPFYRNLHCYVR ARLNDQYGDAVQPRTGPIRADLLGNMWAQQWGNIYDIVQPKGVTSSYDLNKLLVEKGYDPVKMVKTGENFYSSLGFAPLP ETFWNRSLITRPRDREVVCHASAWNLDDKDDIRIKMCTKVNAEDFSTVHHELGHNYYQRAYKDQPVLFRNGANDGFHEAI GDFAALSASTPTYLNQIGLLEKVPGADEDIPFLLKMALDKIAFLPFGLLVDRWRWQVFSGETTPEEYNADWWKLRLQYQG LMPPAQRPADAFDPGAKYHVPGNTPYTRYFLAHIYQFQFHRAACQQAGWKGPLHRCSVYGQKEMGERFNRMMELGQSQPW PQTLKVFTGETRTDASAVADYFKPLNTWLVQQNKGENCGW >Mature_600_residues MKSMLMAAAAAAVLVAAGPSAAQTAKPTAAEAKAFVENAEAQIEKANAFAARAAWVRANFITEDTQWLEAKASAEQNELA TRFAMEAARFDGVPVDAVTARKLKLLKLYLVSPAPNRPGAAEELANLLTKLDSTYSTGKFEFKGKQITLNDAEDVLRSSR DPAELKAVWEGWRTVSPQMRADYATFAGLSNEGAKSLGFKDTGALWRSNYDMDPDAFAAETDRLWKQVEPFYRNLHCYVR ARLNDQYGDAVQPRTGPIRADLLGNMWAQQWGNIYDIVQPKGVTSSYDLNKLLVEKGYDPVKMVKTGENFYSSLGFAPLP ETFWNRSLITRPRDREVVCHASAWNLDDKDDIRIKMCTKVNAEDFSTVHHELGHNYYQRAYKDQPVLFRNGANDGFHEAI GDFAALSASTPTYLNQIGLLEKVPGADEDIPFLLKMALDKIAFLPFGLLVDRWRWQVFSGETTPEEYNADWWKLRLQYQG LMPPAQRPADAFDPGAKYHVPGNTPYTRYFLAHIYQFQFHRAACQQAGWKGPLHRCSVYGQKEMGERFNRMMELGQSQPW PQTLKVFTGETRTDASAVADYFKPLNTWLVQQNKGENCGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI23238214, Length=578, Percent_Identity=43.2525951557093, Blast_Score=479, Evalue=1e-135, Organism=Homo sapiens, GI4503273, Length=578, Percent_Identity=43.2525951557093, Blast_Score=477, Evalue=1e-134, Organism=Homo sapiens, GI295844837, Length=578, Percent_Identity=39.2733564013841, Blast_Score=405, Evalue=1e-113, Organism=Homo sapiens, GI11225609, Length=609, Percent_Identity=34.1543513957307, Blast_Score=355, Evalue=8e-98, Organism=Caenorhabditis elegans, GI71985287, Length=469, Percent_Identity=29.4243070362473, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI24584232, Length=587, Percent_Identity=37.3083475298126, Blast_Score=402, Evalue=1e-112, Organism=Drosophila melanogaster, GI17137008, Length=587, Percent_Identity=37.3083475298126, Blast_Score=402, Evalue=1e-112, Organism=Drosophila melanogaster, GI17137262, Length=618, Percent_Identity=36.4077669902913, Blast_Score=382, Evalue=1e-106, Organism=Drosophila melanogaster, GI85724942, Length=458, Percent_Identity=38.646288209607, Blast_Score=357, Evalue=2e-98, Organism=Drosophila melanogaster, GI22026846, Length=461, Percent_Identity=27.765726681128, Blast_Score=178, Evalue=9e-45, Organism=Drosophila melanogaster, GI24762773, Length=455, Percent_Identity=26.5934065934066, Blast_Score=167, Evalue=1e-41, Organism=Drosophila melanogaster, GI28574153, Length=469, Percent_Identity=24.7334754797441, Blast_Score=150, Evalue=3e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67545; Mature: 67545
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSMLMAAAAAAVLVAAGPSAAQTAKPTAAEAKAFVENAEAQIEKANAFAARAAWVRANF CCHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITEDTQWLEAKASAEQNELATRFAMEAARFDGVPVDAVTARKLKLLKLYLVSPAPNRPGA CCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEEEEECCCCCCCCH AEELANLLTKLDSTYSTGKFEFKGKQITLNDAEDVLRSSRDPAELKAVWEGWRTVSPQMR HHHHHHHHHHHCCCCCCCEEEECCCEEEECCHHHHHHCCCCHHHHHHHHHHHHCCCCHHH ADYATFAGLSNEGAKSLGFKDTGALWRSNYDMDPDAFAAETDRLWKQVEPFYRNLHCYVR HHHHHHCCCCCCCCHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEE ARLNDQYGDAVQPRTGPIRADLLGNMWAQQWGNIYDIVQPKGVTSSYDLNKLLVEKGYDP EECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHCCCCH VKMVKTGENFYSSLGFAPLPETFWNRSLITRPRDREVVCHASAWNLDDKDDIRIKMCTKV HHHHCCCHHHHHHCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECC NAEDFSTVHHELGHNYYQRAYKDQPVLFRNGANDGFHEAIGDFAALSASTPTYLNQIGLL CHHHHHHHHHHHCHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHCHH EKVPGADEDIPFLLKMALDKIAFLPFGLLVDRWRWQVFSGETTPEEYNADWWKLRLQYQG HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHCCCEEEEEEEECC LMPPAQRPADAFDPGAKYHVPGNTPYTRYFLAHIYQFQFHRAACQQAGWKGPLHRCSVYG CCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCC QKEMGERFNRMMELGQSQPWPQTLKVFTGETRTDASAVADYFKPLNTWLVQQNKGENCGW CHHHHHHHHHHHHHCCCCCCCHHHHEECCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCC >Mature Secondary Structure MKSMLMAAAAAAVLVAAGPSAAQTAKPTAAEAKAFVENAEAQIEKANAFAARAAWVRANF CCHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITEDTQWLEAKASAEQNELATRFAMEAARFDGVPVDAVTARKLKLLKLYLVSPAPNRPGA CCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEEEEECCCCCCCCH AEELANLLTKLDSTYSTGKFEFKGKQITLNDAEDVLRSSRDPAELKAVWEGWRTVSPQMR HHHHHHHHHHHCCCCCCCEEEECCCEEEECCHHHHHHCCCCHHHHHHHHHHHHCCCCHHH ADYATFAGLSNEGAKSLGFKDTGALWRSNYDMDPDAFAAETDRLWKQVEPFYRNLHCYVR HHHHHHCCCCCCCCHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEE ARLNDQYGDAVQPRTGPIRADLLGNMWAQQWGNIYDIVQPKGVTSSYDLNKLLVEKGYDP EECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHCCCCH VKMVKTGENFYSSLGFAPLPETFWNRSLITRPRDREVVCHASAWNLDDKDDIRIKMCTKV HHHHCCCHHHHHHCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECC NAEDFSTVHHELGHNYYQRAYKDQPVLFRNGANDGFHEAIGDFAALSASTPTYLNQIGLL CHHHHHHHHHHHCHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHCHH EKVPGADEDIPFLLKMALDKIAFLPFGLLVDRWRWQVFSGETTPEEYNADWWKLRLQYQG HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHCCCEEEEEEEECC LMPPAQRPADAFDPGAKYHVPGNTPYTRYFLAHIYQFQFHRAACQQAGWKGPLHRCSVYG CCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCC QKEMGERFNRMMELGQSQPWPQTLKVFTGETRTDASAVADYFKPLNTWLVQQNKGENCGW CHHHHHHHHHHHHHCCCCCCCHHHHEECCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA