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The map label for this gene is phyR [H]

Identifier: 197103769

GI number: 197103769

Start: 296717

End: 297517

Strand: Direct

Name: phyR [H]

Synonym: PHZ_c0303

Alternate gene names: 197103769

Gene position: 296717-297517 (Clockwise)

Preceding gene: 197103764

Following gene: 197103772

Centisome position: 7.42

GC content: 70.41

Gene sequence:

>801_bases
TTGAGTCTTCTAGCCCGACTGGCGCCGCATCTGCCCTACGTGCGCCGTTACGCCCGCGCGCTGACGGGGGATCAGGCCAC
CGGCGACCATTATGTGCGGGTCGCCCTCGAGGCGCTCGCCGCGGGCGAGCGGGTCCTGGAATCCAGCATGACCCCGCGCG
TGGCGCTGTACCACGTGTTCCACGCCATCTGGTGCACCTCGGGCGCCCAGCTCGAGGGGCCGCAGGAAGAGGACGTGTCG
GCCGACGACACCACGCGGCGGCTGATGCGCATCGCCCCGCGCTCGCGCCAGGCCTTCCTGCTCACCGCCCTCGAGGGCTT
CACCCCGTCCGAGGCCGCCCAGATCCTGGGCGCCGAGTTCCCCGAGGTCGAGAAGCTGATCGCCGAGGCCCAGGCCGAGA
TCGACGCCGAGCTGGCCACCGACGTCCTGATCATCGAGGACGAGCCGGTGATCGCCGCCGACATCGAGGCGCTGGTCAAG
GAGCTGGGCCACACGGTGGTGGACATCGCCGCCACCCGCACCGAGGCGGTGGACGCCGTCGCCCGCAAGACGCCGGGTCT
GGTGCTGGCCGACATCCAGCTCGCCGACGGCTCGTCGGGCATCGACGCGGTGAAGGACATCCTCGCCCGCTACGACGTGC
CGGTGATCTTCATCACCGCGTTCCCCGAGCGCCTGCTGACAGGGGAGCGGCCCGAGCCGACCTTCCTGATCACCAAGCCG
TTCCAGCCCGAGACGGTGAAGGCGGCCATCGGCCAGGCGCTGTTCTTCCATCCGCGCAAGGCGAACAAACAGGCCGCCTG
A

Upstream 100 bases:

>100_bases
GTTCCATCGGCTGGCGTTTTCGGATCATCATGTGCGCCAGGCGGGGGGCCAGCCCTCCGTTCGGGCTGCCGTTTTCTCCG
AGATACGGGAGGGGTCACCT

Downstream 100 bases:

>100_bases
TCCCGCGGACGGAACGCTAAGGAAAAAAGAGGGCCCCGCTCCTGGCTGGAGCGGGGCCCTTCTTCTTGGCTGTCCCTCTG
GGACCTCGCCGATCAGGAGG

Product: two-component response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MSLLARLAPHLPYVRRYARALTGDQATGDHYVRVALEALAAGERVLESSMTPRVALYHVFHAIWCTSGAQLEGPQEEDVS
ADDTTRRLMRIAPRSRQAFLLTALEGFTPSEAAQILGAEFPEVEKLIAEAQAEIDAELATDVLIIEDEPVIAADIEALVK
ELGHTVVDIAATRTEAVDAVARKTPGLVLADIQLADGSSGIDAVKDILARYDVPVIFITAFPERLLTGERPEPTFLITKP
FQPETVKAAIGQALFFHPRKANKQAA

Sequences:

>Translated_266_residues
MSLLARLAPHLPYVRRYARALTGDQATGDHYVRVALEALAAGERVLESSMTPRVALYHVFHAIWCTSGAQLEGPQEEDVS
ADDTTRRLMRIAPRSRQAFLLTALEGFTPSEAAQILGAEFPEVEKLIAEAQAEIDAELATDVLIIEDEPVIAADIEALVK
ELGHTVVDIAATRTEAVDAVARKTPGLVLADIQLADGSSGIDAVKDILARYDVPVIFITAFPERLLTGERPEPTFLITKP
FQPETVKAAIGQALFFHPRKANKQAA
>Mature_265_residues
SLLARLAPHLPYVRRYARALTGDQATGDHYVRVALEALAAGERVLESSMTPRVALYHVFHAIWCTSGAQLEGPQEEDVSA
DDTTRRLMRIAPRSRQAFLLTALEGFTPSEAAQILGAEFPEVEKLIAEAQAEIDAELATDVLIIEDEPVIAADIEALVKE
LGHTVVDIAATRTEAVDAVARKTPGLVLADIQLADGSSGIDAVKDILARYDVPVIFITAFPERLLTGERPEPTFLITKPF
QPETVKAAIGQALFFHPRKANKQAA

Specific function: Key regulator for adaptation to epiphytic life (leaf colonizing) of the bacterium. Positively regulates several genes including katE, sodA, hsp20, dps and gloA. However it is not known whether this regulation is direct or indirect. Also induces several de

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR014605
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 28885; Mature: 28754

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLARLAPHLPYVRRYARALTGDQATGDHYVRVALEALAAGERVLESSMTPRVALYHVF
CCHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
HAIWCTSGAQLEGPQEEDVSADDTTRRLMRIAPRSRQAFLLTALEGFTPSEAAQILGAEF
HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEHHHCCCHHHHHHHHCCCC
PEVEKLIAEAQAEIDAELATDVLIIEDEPVIAADIEALVKELGHTVVDIAATRTEAVDAV
HHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
ARKTPGLVLADIQLADGSSGIDAVKDILARYDVPVIFITAFPERLLTGERPEPTFLITKP
HHCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHCCCCCCCCEEEECC
FQPETVKAAIGQALFFHPRKANKQAA
CCCHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SLLARLAPHLPYVRRYARALTGDQATGDHYVRVALEALAAGERVLESSMTPRVALYHVF
CHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
HAIWCTSGAQLEGPQEEDVSADDTTRRLMRIAPRSRQAFLLTALEGFTPSEAAQILGAEF
HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEHHHCCCHHHHHHHHCCCC
PEVEKLIAEAQAEIDAELATDVLIIEDEPVIAADIEALVKELGHTVVDIAATRTEAVDAV
HHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
ARKTPGLVLADIQLADGSSGIDAVKDILARYDVPVIFITAFPERLLTGERPEPTFLITKP
HHCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHCCCCCCCCEEEECC
FQPETVKAAIGQALFFHPRKANKQAA
CCCHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA