| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197103772
Identifier: 197103772
GI number: 197103772
Start: 299998
End: 300864
Strand: Direct
Name: 197103772
Synonym: PHZ_c0306
Alternate gene names: NA
Gene position: 299998-300864 (Clockwise)
Preceding gene: 197103769
Following gene: 197103773
Centisome position: 7.51
GC content: 74.74
Gene sequence:
>867_bases ATGACGGCGATCCGCCGCGTCGAGGTCATCGTCAACGTCGCCTCGGGCAGCGTCGACGCGGACGCCCCTCAGGAGGCCGA GAAGATCCTCGCCGACGCCGGCGTGAGCGCGAACGTCTGCGCGCCCGCGACGGACGAGCTGGGCGACTGCCTGCGCCGCG CCGTCGACTCCGCGCCCGACCTGCTGGTCGTGCTCGCCGGCGACGGCACGGCCCGCGCCGCGGCCGAAATGTGCGGGCCC GAGGGGCCGGTCCTCGCGCCCCTGCCGGGCGGGACGATGAACATGCTGCCGCATGCGGTCTACGGCGCCCGGCCGTGGCA GGACGCCCTGACCATCGCCCTCGCCCAGGGCGAGCCGCGGCTGATCGGCGGCGGAGTGGTCGAGGACCACAAGTTCATGG TGGCGGCGATCCTCGGCTCGCCGGCCCTGTGGGCCCCGGCCCGCGAGGCCGCGCGCTACGGCCGGAAGAAACTGGCCTGG GTCCGCGCCAAGCGGGCCTTCCGCAGGGCGTTCACCGGCCGGCTCCGCTACGCCCTCGACCAGGGCCCGCGCGAGAAGGC CGAGGCGCTGATCTTCATGTGCCCGACCACGTCGCGGGCGCTGGCCGACGAGGAGCAGGCGCTGGAAGCGGCCGCGGTCA ACGTCAACAACGCCGCCCAGGTCTTCCGCCTGGGGATCAACGCTCTCGTCCGCGACTGGCGCGACGACCCCGCGGTCGAG AGCCGGCGCTGCCGCCTGGCGCGGATCTGGTCGGCCCAGGGCGTCCCGGCGGTGCTCGACGGGGAGTCCGTGCGGCTGAA GGCGGTCACCGAGGTCCGCTACGAGCCGGCGGTCGCCCGCATCCTCGCGATTCCGAAGGACGTCTGA
Upstream 100 bases:
>100_bases GACGCGGCCTCGGACGCCAGCCGGGCGATCAGCGAGGTGACCGACCCCGATGGAGGCCAGGCGCCTGCCGATCCCCGCTG ACGCGGCCGCGAGGGGGCCG
Downstream 100 bases:
>100_bases GCCGTGACCATCCGGTTGGCGCACCTCTCGGACATCCATTTCGGAGGCGAGAACCCCGAGGCCGTCGCCGCGGCGGCCGA CATGCTGCGCGGCGAGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Diacylglycerol Kinase Catalytic Domain Protein
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MTAIRRVEVIVNVASGSVDADAPQEAEKILADAGVSANVCAPATDELGDCLRRAVDSAPDLLVVLAGDGTARAAAEMCGP EGPVLAPLPGGTMNMLPHAVYGARPWQDALTIALAQGEPRLIGGGVVEDHKFMVAAILGSPALWAPAREAARYGRKKLAW VRAKRAFRRAFTGRLRYALDQGPREKAEALIFMCPTTSRALADEEQALEAAAVNVNNAAQVFRLGINALVRDWRDDPAVE SRRCRLARIWSAQGVPAVLDGESVRLKAVTEVRYEPAVARILAIPKDV
Sequences:
>Translated_288_residues MTAIRRVEVIVNVASGSVDADAPQEAEKILADAGVSANVCAPATDELGDCLRRAVDSAPDLLVVLAGDGTARAAAEMCGP EGPVLAPLPGGTMNMLPHAVYGARPWQDALTIALAQGEPRLIGGGVVEDHKFMVAAILGSPALWAPAREAARYGRKKLAW VRAKRAFRRAFTGRLRYALDQGPREKAEALIFMCPTTSRALADEEQALEAAAVNVNNAAQVFRLGINALVRDWRDDPAVE SRRCRLARIWSAQGVPAVLDGESVRLKAVTEVRYEPAVARILAIPKDV >Mature_287_residues TAIRRVEVIVNVASGSVDADAPQEAEKILADAGVSANVCAPATDELGDCLRRAVDSAPDLLVVLAGDGTARAAAEMCGPE GPVLAPLPGGTMNMLPHAVYGARPWQDALTIALAQGEPRLIGGGVVEDHKFMVAAILGSPALWAPAREAARYGRKKLAWV RAKRAFRRAFTGRLRYALDQGPREKAEALIFMCPTTSRALADEEQALEAAAVNVNNAAQVFRLGINALVRDWRDDPAVES RRCRLARIWSAQGVPAVLDGESVRLKAVTEVRYEPAVARILAIPKDV
Specific function: Unknown
COG id: COG1597
COG function: function code IR; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30731; Mature: 30599
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAIRRVEVIVNVASGSVDADAPQEAEKILADAGVSANVCAPATDELGDCLRRAVDSAPD CCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCC LLVVLAGDGTARAAAEMCGPEGPVLAPLPGGTMNMLPHAVYGARPWQDALTIALAQGEPR EEEEEECCCCHHHHHHHCCCCCCEEEECCCCHHHHCCHHHHCCCCCCHHEEEEEECCCCE LIGGGVVEDHKFMVAAILGSPALWAPAREAARYGRKKLAWVRAKRAFRRAFTGRLRYALD EEECCEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC QGPREKAEALIFMCPTTSRALADEEQALEAAAVNVNNAAQVFRLGINALVRDWRDDPAVE CCCCHHHCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHH SRRCRLARIWSAQGVPAVLDGESVRLKAVTEVRYEPAVARILAIPKDV HHHHHHHEECCCCCCCEEECCCCEEEEEHHHHHHCHHHHHHHHCCCCC >Mature Secondary Structure TAIRRVEVIVNVASGSVDADAPQEAEKILADAGVSANVCAPATDELGDCLRRAVDSAPD CCCEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCC LLVVLAGDGTARAAAEMCGPEGPVLAPLPGGTMNMLPHAVYGARPWQDALTIALAQGEPR EEEEEECCCCHHHHHHHCCCCCCEEEECCCCHHHHCCHHHHCCCCCCHHEEEEEECCCCE LIGGGVVEDHKFMVAAILGSPALWAPAREAARYGRKKLAWVRAKRAFRRAFTGRLRYALD EEECCEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC QGPREKAEALIFMCPTTSRALADEEQALEAAAVNVNNAAQVFRLGINALVRDWRDDPAVE CCCCHHHCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHH SRRCRLARIWSAQGVPAVLDGESVRLKAVTEVRYEPAVARILAIPKDV HHHHHHHEECCCCCCCEEECCCCEEEEEHHHHHHCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA