| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is phnA [H]
Identifier: 197103729
GI number: 197103729
Start: 261524
End: 261826
Strand: Direct
Name: phnA [H]
Synonym: PHZ_c0263
Alternate gene names: 197103729
Gene position: 261524-261826 (Clockwise)
Preceding gene: 197103728
Following gene: 197103730
Centisome position: 6.54
GC content: 69.64
Gene sequence:
>303_bases GTGAGCGGCGAAGATTTCGTCTACGACGAGGCGACCGGCGAGTGGATCAGCGCCGCCGAGGCGGCGGAAAAGTCGGCGAG CGCCGGCCAGGTCGAGGTCCGCGATTCCGCGGGGAACCTGCTGGCGGACGGCGACGCGGTGGTGCTGGTCAAGGACCTCG AGGTGAAGGGCGCCGGCCAGACGCTGAAGCGCGGCACGAAGATCCGCTCGATCCGCCTGACCGGCGATCCCCAGGAGATC GACTGCCGCTACGAGGGCATCAAGGGCCTGGTCCTGCGCGCCGAGTTCGTGCGCAAGGCCTGA
Upstream 100 bases:
>100_bases GGCCTAGAGCCCAGGCCTAAAGCCCAGGCCTAATCCTTTGCTTGACCCCGAGCGGCGCGGCTTGCTTGAAGTCGCGCCTC ATCGAGTGGGGGAAGCGGGC
Downstream 100 bases:
>100_bases GGGCCGCCGGAACGGAACGGCGAGGGGGCGCGCTTTCCCCGCGGGGCGGAACGGGTCCGCCCGCGAGGAGGAGCTTCCCA CATGATCCGCAAGGCGAACG
Product: alkylphosphonate uptake protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 100; Mature: 99
Protein sequence:
>100_residues MSGEDFVYDEATGEWISAAEAAEKSASAGQVEVRDSAGNLLADGDAVVLVKDLEVKGAGQTLKRGTKIRSIRLTGDPQEI DCRYEGIKGLVLRAEFVRKA
Sequences:
>Translated_100_residues MSGEDFVYDEATGEWISAAEAAEKSASAGQVEVRDSAGNLLADGDAVVLVKDLEVKGAGQTLKRGTKIRSIRLTGDPQEI DCRYEGIKGLVLRAEFVRKA >Mature_99_residues SGEDFVYDEATGEWISAAEAAEKSASAGQVEVRDSAGNLLADGDAVVLVKDLEVKGAGQTLKRGTKIRSIRLTGDPQEID CRYEGIKGLVLRAEFVRKA
Specific function: Unknown
COG id: COG2824
COG function: function code P; Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790547, Length=94, Percent_Identity=42.5531914893617, Blast_Score=83, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004624 - InterPro: IPR013988 - InterPro: IPR013987 [H]
Pfam domain/function: PF03831 PhnA; PF08274 PhnA_Zn_Ribbon [H]
EC number: NA
Molecular weight: Translated: 10699; Mature: 10568
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGEDFVYDEATGEWISAAEAAEKSASAGQVEVRDSAGNLLADGDAVVLVKDLEVKGAGQ CCCCCEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCEEECCCEEEEEEECEECCCCC TLKRGTKIRSIRLTGDPQEIDCRYEGIKGLVLRAEFVRKA HHHCCCEEEEEEECCCCCEEEEEECCCCEEEEEEHHHHCC >Mature Secondary Structure SGEDFVYDEATGEWISAAEAAEKSASAGQVEVRDSAGNLLADGDAVVLVKDLEVKGAGQ CCCCEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCEEECCCEEEEEEECEECCCCC TLKRGTKIRSIRLTGDPQEIDCRYEGIKGLVLRAEFVRKA HHHCCCEEEEEEECCCCCEEEEEECCCCEEEEEEHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]