Click here to switch to the map view.

The map label for this gene is rhtA [H]

Identifier: 197103728

GI number: 197103728

Start: 260261

End: 261166

Strand: Direct

Name: rhtA [H]

Synonym: PHZ_c0262

Alternate gene names: 197103728

Gene position: 260261-261166 (Clockwise)

Preceding gene: 197103715

Following gene: 197103729

Centisome position: 6.51

GC content: 75.72

Gene sequence:

>906_bases
ATGGCGCGAAACGCGGCCTGGCCCATGGGCGTCGTGGCGCCGCTGCTGGCGGTGACCGCCGCCATGGCCGCCTTCCAGGT
CGGCGCGGCCTTCGCCAAGCAGCTCTTTCCAGCGGTGGGACCGCAAGGGGCGGCGGCCCTCCGCATCGTCCTGGGCGCGC
TGATGCTGCTTGCCGTGGGGCGGCCCTGGCGCGCCTGGCCGGGCCGCGGGTCCATCGTCCCGCTGATCGGGCTCGGGATC
TCGGTCGCCGGCGTCATCCTGTTCTTCTACCTGGCCATCGACCGCCTGCCCCTCGGCGTGGCCATCGCGCTGCAGTTCCT
GGGGCCGCTGAGCGTGGCGGTGTTCGGGTCGCGCCGGGCCAGCGACCTGGTCTGGGCCGCCACGGCCGCGGCCGGCGTCT
GGCTGCTGGTGGGCGTGGGCCGGCAGACCGGCGCCCTGGACCTGCTGGGGATCGGCTGGGCGCTGGCGGCGGCCGCCTGC
TGGGCGGGTTACATCCTGGTGGGGCGGCGGGTGAGCCAGGGCTACGGGGTGGCGGTGGCGAGTCTTTCGATCGGCGTTGC
GGCGCTGGTCGTTCTGCCGGTGGGGCTGGCGCACGCCGGCCCGGCGCTGTTCGCGCCGGCGATCCTGCCGTTGGCGCTGC
TGGTGGCGTTGATGTCGACGGCCGTGCCCTTCGCCCTGGAGTTCTTCGCCATGCCGCGGATGCCGGCGCGCACCTTCGCC
GTGTTCACCAGCCTGGAGCCGGCGTTCGGGGTGCTGTCGGGCCTGTTCCTGCTGCACGAGCGTCTCAGCCCGGCGCAGGT
GGGCGGCGTCGCCATGGTCGTGGCGGCGGCGGCGGCGGCGGCCTGGTCCAGCGCCGCGGGCGCCCCGGCGGCCCATCCGG
ACCTCGCCGACGCCGCCCCCAACTGA

Upstream 100 bases:

>100_bases
CGCCCGCAAGCTTGGCCGTGGCCAGTGTGTGGCGGGCCGGCCCTTTCGCGGCGCGCCGGGCGGTCCTACTCAGGACGTCT
GGCAAGGGGGAGGGGGCGCC

Downstream 100 bases:

>100_bases
GCGGGCGGCGTCGGCGAGGGCGCGCGGGGGAACCCGCCGGCGGCCAAGCTCGTTCGGCACGGCATGACCAGGGCTGAACT
CTATCTCCAGGAAGCCGCCG

Product: conserved predicted permease, DMT superfamily

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MARNAAWPMGVVAPLLAVTAAMAAFQVGAAFAKQLFPAVGPQGAAALRIVLGALMLLAVGRPWRAWPGRGSIVPLIGLGI
SVAGVILFFYLAIDRLPLGVAIALQFLGPLSVAVFGSRRASDLVWAATAAAGVWLLVGVGRQTGALDLLGIGWALAAAAC
WAGYILVGRRVSQGYGVAVASLSIGVAALVVLPVGLAHAGPALFAPAILPLALLVALMSTAVPFALEFFAMPRMPARTFA
VFTSLEPAFGVLSGLFLLHERLSPAQVGGVAMVVAAAAAAAWSSAAGAPAAHPDLADAAPN

Sequences:

>Translated_301_residues
MARNAAWPMGVVAPLLAVTAAMAAFQVGAAFAKQLFPAVGPQGAAALRIVLGALMLLAVGRPWRAWPGRGSIVPLIGLGI
SVAGVILFFYLAIDRLPLGVAIALQFLGPLSVAVFGSRRASDLVWAATAAAGVWLLVGVGRQTGALDLLGIGWALAAAAC
WAGYILVGRRVSQGYGVAVASLSIGVAALVVLPVGLAHAGPALFAPAILPLALLVALMSTAVPFALEFFAMPRMPARTFA
VFTSLEPAFGVLSGLFLLHERLSPAQVGGVAMVVAAAAAAAWSSAAGAPAAHPDLADAAPN
>Mature_300_residues
ARNAAWPMGVVAPLLAVTAAMAAFQVGAAFAKQLFPAVGPQGAAALRIVLGALMLLAVGRPWRAWPGRGSIVPLIGLGIS
VAGVILFFYLAIDRLPLGVAIALQFLGPLSVAVFGSRRASDLVWAATAAAGVWLLVGVGRQTGALDLLGIGWALAAAACW
AGYILVGRRVSQGYGVAVASLSIGVAALVVLPVGLAHAGPALFAPAILPLALLVALMSTAVPFALEFFAMPRMPARTFAV
FTSLEPAFGVLSGLFLLHERLSPAQVGGVAMVVAAAAAAAWSSAAGAPAAHPDLADAAPN

Specific function: Unknown

COG id: COG5006

COG function: function code R; Predicted permease, DMT superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1787033, Length=287, Percent_Identity=41.1149825783972, Blast_Score=214, Evalue=5e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 30291; Mature: 30160

Theoretical pI: Translated: 11.50; Mature: 11.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARNAAWPMGVVAPLLAVTAAMAAFQVGAAFAKQLFPAVGPQGAAALRIVLGALMLLAVG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
RPWRAWPGRGSIVPLIGLGISVAGVILFFYLAIDRLPLGVAIALQFLGPLSVAVFGSRRA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCH
SDLVWAATAAAGVWLLVGVGRQTGALDLLGIGWALAAAACWAGYILVGRRVSQGYGVAVA
HHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
SLSIGVAALVVLPVGLAHAGPALFAPAILPLALLVALMSTAVPFALEFFAMPRMPARTFA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
VFTSLEPAFGVLSGLFLLHERLSPAQVGGVAMVVAAAAAAAWSSAAGAPAAHPDLADAAP
HHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
N
C
>Mature Secondary Structure 
ARNAAWPMGVVAPLLAVTAAMAAFQVGAAFAKQLFPAVGPQGAAALRIVLGALMLLAVG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
RPWRAWPGRGSIVPLIGLGISVAGVILFFYLAIDRLPLGVAIALQFLGPLSVAVFGSRRA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCH
SDLVWAATAAAGVWLLVGVGRQTGALDLLGIGWALAAAACWAGYILVGRRVSQGYGVAVA
HHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
SLSIGVAALVVLPVGLAHAGPALFAPAILPLALLVALMSTAVPFALEFFAMPRMPARTFA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
VFTSLEPAFGVLSGLFLLHERLSPAQVGGVAMVVAAAAAAAWSSAAGAPAAHPDLADAAP
HHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
N
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]