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The map label for this gene is algE3 [H]

Identifier: 197103699

GI number: 197103699

Start: 235305

End: 236945

Strand: Reverse

Name: algE3 [H]

Synonym: PHZ_c0233

Alternate gene names: 197103699

Gene position: 236945-235305 (Counterclockwise)

Preceding gene: 197103707

Following gene: 197103697

Centisome position: 5.93

GC content: 75.2

Gene sequence:

>1641_bases
ATGGCCGGCGCCGTTCCCAGCATCAACCTTCCCGTCCCGCCCGGCGGACACCTGTTCGTCAGCGAGGCGGGCCTGCCTGA
GGGCACGAACCCCGGCGGGGCGAGCACCCAGAGCAGCTGGACCTTCACGGTCAGTTCGCCCGACGGAATCGAGAACCTCA
CCGTCGGCGGCTACGCGGCGATCCGCGGCGGCGTCTTCACCCCGGGCTCGGTCGACCTCGGCTTCGCCGTCCTGTCGGTC
ACCGGCTTCGAGCCCGGCAACGGCTCGGTGAGCGTGAACTACCGCCTGACGGGGCCCATCGACAGCGGCGGCGGCTCGCA
GACCCGCTACGGCACGATCCTCGGCTACGAGGTGGTCCTCGAGGATCCCGACGGCGACCGCGCCGAGGCCGACCTCGTGG
TCCAGATCCGCGACGACGAGGCCGTGGCCCTGTCGCCCGACGCGGCCGCCGCCGCGGCTGGCGGGACCGCGTCCGGCAAC
CTCGTCGCGGACGGGACGGCCGACAGCTTCACGGCCGACGGCTTCGGCGGGATCACCCGCATCGGCGACGCCAGCGGCGG
AGCCTGGGACGCCACGCCCGACGCCTCGGGCCGGCTGGTGTTCGAAGGGGCCTACGGGACCCTGAGCGTGAACGCGGCCG
GCGACTACAGCTATGCCGCGCGCGCGGACGCGCCCGCGGGCGCGGTCGACCGCCTCACCTACTGGGCCCAGGACGGCGAC
GGCGACGAGCGGATGTCCTGGCTGGAGGTCACGATCCGGGAGGGCGGGGGGTCCGCGCCCACCGGCGGCGAGGGCCAGGC
GATCGCGGCCGACGGCCCCTACGCCACCCTCTCCGGCGGGGCCGGGAACGACACCCTGACCGCCAGCGCCGGCGGCGACA
CCATCACGGCCGGCGACGGGGCCGACGTCATCGTCCTGCCGAGCGAGCCCTGGGCGCCGCACGTCGTCGCCGACTTCGCC
CTCGGGACCGACCGGCTGGACTTCCCGGCGCTGGAGGCGGCCTACGGCGGCGCCGATCCGGTGGCGGACGGCTTCGTCTG
GTTCCTGGACGACGGCGCGGGCGGGACGAAGCTGCTGTTCGACCGCGACGGCGCGGCCGACGGCCAGGAATGGCCGAACT
ACGTCCTGCACCTGCAGGGGGTCTCGGCCGACGGCCTGACCTGGGACGCGCTGGCGGGCGGCGGCGGCTCGGCGCCTGCC
GAGCCCGATCCGGGTCCCGATCCCGAACCGCCGGCCGCCGGGGGCGAGCTGATCGTCTCGCCGGGGCCCGGCTCGACCCT
GACCGGCGGGGCGGGGAACGACACCCTGGTCTCCAGCCGCGGCGAGGACGTGCTTTCGGGCGGGGCGGGCGCCGACCGGT
TCGTGTTCGAGGCCGAGAACTGGGCCCCGGCGCGCATCGCCGACTTCGAGCCCGGCGCCGACGTCATCGACCTGCGCGGC
ATGCTGGACGCCATCGGCTACGCCGGGACCGATCCGTTCGCCGACGGCCACCTGCGGCTGATCGAGGACGGCGCGGGCGG
GACCAAGGTGCTGTTCGACCGCGACGCCGAGGGTCCCGACCCCGTCTGGGCCAACTACGTCTTCCAGGTGGAGCACGTCG
CGCCCGCGGCGCTCGGCGCCTCGGCCTGGATCTTCCAGTAG

Upstream 100 bases:

>100_bases
CTCGATGTTCGTCGATCGCCCCTTCAGCGACCGCGGCCGGCCGGCCCGGGCGCATTTCACCCTGCCCATCACTGTCCACG
CGCACGGGGAGGCCTGAGCC

Downstream 100 bases:

>100_bases
GCGCAAGAAAAAGGCCCGCCGGCGAGCCGGCGGGCCAGTCTGCAACAGAGCTCGACTAGAGAGCTGCTGGGAGTGCTTAC
TGCTTGGCCAGCTGGGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Mannuronan epimerase 3 [H]

Number of amino acids: Translated: 546; Mature: 545

Protein sequence:

>546_residues
MAGAVPSINLPVPPGGHLFVSEAGLPEGTNPGGASTQSSWTFTVSSPDGIENLTVGGYAAIRGGVFTPGSVDLGFAVLSV
TGFEPGNGSVSVNYRLTGPIDSGGGSQTRYGTILGYEVVLEDPDGDRAEADLVVQIRDDEAVALSPDAAAAAAGGTASGN
LVADGTADSFTADGFGGITRIGDASGGAWDATPDASGRLVFEGAYGTLSVNAAGDYSYAARADAPAGAVDRLTYWAQDGD
GDERMSWLEVTIREGGGSAPTGGEGQAIAADGPYATLSGGAGNDTLTASAGGDTITAGDGADVIVLPSEPWAPHVVADFA
LGTDRLDFPALEAAYGGADPVADGFVWFLDDGAGGTKLLFDRDGAADGQEWPNYVLHLQGVSADGLTWDALAGGGGSAPA
EPDPGPDPEPPAAGGELIVSPGPGSTLTGGAGNDTLVSSRGEDVLSGGAGADRFVFEAENWAPARIADFEPGADVIDLRG
MLDAIGYAGTDPFADGHLRLIEDGAGGTKVLFDRDAEGPDPVWANYVFQVEHVAPAALGASAWIFQ

Sequences:

>Translated_546_residues
MAGAVPSINLPVPPGGHLFVSEAGLPEGTNPGGASTQSSWTFTVSSPDGIENLTVGGYAAIRGGVFTPGSVDLGFAVLSV
TGFEPGNGSVSVNYRLTGPIDSGGGSQTRYGTILGYEVVLEDPDGDRAEADLVVQIRDDEAVALSPDAAAAAAGGTASGN
LVADGTADSFTADGFGGITRIGDASGGAWDATPDASGRLVFEGAYGTLSVNAAGDYSYAARADAPAGAVDRLTYWAQDGD
GDERMSWLEVTIREGGGSAPTGGEGQAIAADGPYATLSGGAGNDTLTASAGGDTITAGDGADVIVLPSEPWAPHVVADFA
LGTDRLDFPALEAAYGGADPVADGFVWFLDDGAGGTKLLFDRDGAADGQEWPNYVLHLQGVSADGLTWDALAGGGGSAPA
EPDPGPDPEPPAAGGELIVSPGPGSTLTGGAGNDTLVSSRGEDVLSGGAGADRFVFEAENWAPARIADFEPGADVIDLRG
MLDAIGYAGTDPFADGHLRLIEDGAGGTKVLFDRDAEGPDPVWANYVFQVEHVAPAALGASAWIFQ
>Mature_545_residues
AGAVPSINLPVPPGGHLFVSEAGLPEGTNPGGASTQSSWTFTVSSPDGIENLTVGGYAAIRGGVFTPGSVDLGFAVLSVT
GFEPGNGSVSVNYRLTGPIDSGGGSQTRYGTILGYEVVLEDPDGDRAEADLVVQIRDDEAVALSPDAAAAAAGGTASGNL
VADGTADSFTADGFGGITRIGDASGGAWDATPDASGRLVFEGAYGTLSVNAAGDYSYAARADAPAGAVDRLTYWAQDGDG
DERMSWLEVTIREGGGSAPTGGEGQAIAADGPYATLSGGAGNDTLTASAGGDTITAGDGADVIVLPSEPWAPHVVADFAL
GTDRLDFPALEAAYGGADPVADGFVWFLDDGAGGTKLLFDRDGAADGQEWPNYVLHLQGVSADGLTWDALAGGGGSAPAE
PDPGPDPEPPAAGGELIVSPGPGSTLTGGAGNDTLVSSRGEDVLSGGAGADRFVFEAENWAPARIADFEPGADVIDLRGM
LDAIGYAGTDPFADGHLRLIEDGAGGTKVLFDRDAEGPDPVWANYVFQVEHVAPAALGASAWIFQ

Specific function: Converts beta-D-mannuronic acid (M) to alpha-L-guluronic acid (G), producing a polymer with gel-forming capacity, required for the formation of the cyst coat [H]

COG id: COG2931

COG function: function code Q; RTX toxins and related Ca2+-binding proteins

Gene ontology:

Cell location: Secreted, extracellular space. Note=Probably exported via the hemolysin-type secretion pathway [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 16 PbH1 repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006633
- InterPro:   IPR018511
- InterPro:   IPR001343
- InterPro:   IPR022441
- InterPro:   IPR006626
- InterPro:   IPR012334
- InterPro:   IPR011050
- InterPro:   IPR011049 [H]

Pfam domain/function: PF00353 HemolysinCabind [H]

EC number: NA

Molecular weight: Translated: 54624; Mature: 54493

Theoretical pI: Translated: 3.66; Mature: 3.66

Prosite motif: PS00330 HEMOLYSIN_CALCIUM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGAVPSINLPVPPGGHLFVSEAGLPEGTNPGGASTQSSWTFTVSSPDGIENLTVGGYAA
CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCE
IRGGVFTPGSVDLGFAVLSVTGFEPGNGSVSVNYRLTGPIDSGGGSQTRYGTILGYEVVL
ECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEEEE
EDPDGDRAEADLVVQIRDDEAVALSPDAAAAAAGGTASGNLVADGTADSFTADGFGGITR
ECCCCCCCCEEEEEEECCCCEEEECCCHHHHHCCCCCCCCEEECCCCCCCCCCCCCCEEE
IGDASGGAWDATPDASGRLVFEGAYGTLSVNAAGDYSYAARADAPAGAVDRLTYWAQDGD
ECCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCEEECCCCCCCCHHHEEEEECCCC
GDERMSWLEVTIREGGGSAPTGGEGQAIAADGPYATLSGGAGNDTLTASAGGDTITAGDG
CHHCEEEEEEEEECCCCCCCCCCCCCEEECCCCEEEECCCCCCCEEEECCCCCEEECCCC
ADVIVLPSEPWAPHVVADFALGTDRLDFPALEAAYGGADPVADGFVWFLDDGAGGTKLLF
CCEEEECCCCCCCCEEEEEECCCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCCCEEEEE
DRDGAADGQEWPNYVLHLQGVSADGLTWDALAGGGGSAPAEPDPGPDPEPPAAGGELIVS
ECCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEC
PGPGSTLTGGAGNDTLVSSRGEDVLSGGAGADRFVFEAENWAPARIADFEPGADVIDLRG
CCCCCCCCCCCCCCCEECCCCCHHHCCCCCCCEEEEECCCCCCCEEECCCCCCCEEHHHH
MLDAIGYAGTDPFADGHLRLIEDGAGGTKVLFDRDAEGPDPVWANYVFQVEHVAPAALGA
HHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCEEEEEEEEECCCCHHCCC
SAWIFQ
EEEEEC
>Mature Secondary Structure 
AGAVPSINLPVPPGGHLFVSEAGLPEGTNPGGASTQSSWTFTVSSPDGIENLTVGGYAA
CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCE
IRGGVFTPGSVDLGFAVLSVTGFEPGNGSVSVNYRLTGPIDSGGGSQTRYGTILGYEVVL
ECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEEEE
EDPDGDRAEADLVVQIRDDEAVALSPDAAAAAAGGTASGNLVADGTADSFTADGFGGITR
ECCCCCCCCEEEEEEECCCCEEEECCCHHHHHCCCCCCCCEEECCCCCCCCCCCCCCEEE
IGDASGGAWDATPDASGRLVFEGAYGTLSVNAAGDYSYAARADAPAGAVDRLTYWAQDGD
ECCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCEEECCCCCCCCHHHEEEEECCCC
GDERMSWLEVTIREGGGSAPTGGEGQAIAADGPYATLSGGAGNDTLTASAGGDTITAGDG
CHHCEEEEEEEEECCCCCCCCCCCCCEEECCCCEEEECCCCCCCEEEECCCCCEEECCCC
ADVIVLPSEPWAPHVVADFALGTDRLDFPALEAAYGGADPVADGFVWFLDDGAGGTKLLF
CCEEEECCCCCCCCEEEEEECCCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCCCEEEEE
DRDGAADGQEWPNYVLHLQGVSADGLTWDALAGGGGSAPAEPDPGPDPEPPAAGGELIVS
ECCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEC
PGPGSTLTGGAGNDTLVSSRGEDVLSGGAGADRFVFEAENWAPARIADFEPGADVIDLRG
CCCCCCCCCCCCCCCEECCCCCHHHCCCCCCCEEEEECCCCCCCEEECCCCCCCEEHHHH
MLDAIGYAGTDPFADGHLRLIEDGAGGTKVLFDRDAEGPDPVWANYVFQVEHVAPAALGA
HHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCEEEEEEEEECCCCHHCCC
SAWIFQ
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7476166; 10937941 [H]