| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197103671
Identifier: 197103671
GI number: 197103671
Start: 201696
End: 202403
Strand: Reverse
Name: 197103671
Synonym: PHZ_c0205
Alternate gene names: NA
Gene position: 202403-201696 (Counterclockwise)
Preceding gene: 197103675
Following gene: 197103670
Centisome position: 5.06
GC content: 73.87
Gene sequence:
>708_bases ATGGCCGACGCGATCGCCCCGCTCCCCGGCCGCGCGGCCCTGGAGCACGTCTCCGAGCTGCTGTCGGTGCAGGTGGCGGC CAGCGGACTCGACCGCGTGCCCGCGCAGGGCCGGGCGATCGTGGTCTGCAACCACCCCACCGGCATCGCCGACGGCGTGG CCGTCTACGACGCGCTGAAGGCCCTGCGCCCCGACATCTGCTTCTACGCCAACGCCGACGCCCACCGGGTCTGCCCCGGC TTCGAGGAGGTGCTGATCCCCGTGGAATGGGTCGAGGGCAAGCGCACCCGCGAGCGCACGCGCCTGACCCTGCAGCTGAC CCGCGAGGCGATGGAGGCCGAGCGGTGCCTGGTGATCTTCCCAGCCGGCCGGCTGGCGCGCCGGCAGCCCGACGGGGGGC TCGCCGATCCGCCCTGGGCGCCGTCGGCGGTCTCGCTGGCCCGGAAGTACGAGGCGCCCGTCGTGCCGGTCCACGTGGCG GGCCCCTGGTCGACGCTGTTCCACTTCTTCCACGGGCTCTCGCAGGAGCTGCGCGACATCACCCTCTTCCACGAGCTGCT GAACAAGCGCGGGCGCCGCTTCGACCTGACGGTCGGCCATCCCGTCGCGCCCGAACGCCTGGCCGGGGATCCCGCCGAGG CGACGCTGGCGCTCAAGGCGCACGTCGAGGGGATCCTTCCCGCCGATCCGGACCGGGCCTTCGCATGA
Upstream 100 bases:
>100_bases CCTGATCGCCGAGCGCGCGCCGAAGCTGTCGGGCTCGGCCGCCTGGCCCGTGCTGCGCCCGCTGCTCTACGCCCTGCTGG ACTACGGCAAGGCGCGGCGG
Downstream 100 bases:
>100_bases TCCTCGCGGCCGAGGGCGAGTTCCGCCTCGACGACGAGGCGGCCACGGCGCGGCTGGGCGCGGCGATCGCGGCCGGGCTG AAGCCGGGCGAGGCGGTCTG
Product: acyltransferase family protein
Products: NA
Alternate protein names: Hemolysin; Acyltransferase Family Protein; Acyltransferase Domain Protein; Acyltransferase Domain-Containing Protein; Acyltransferase; Phosphate Acyltransferase Family Protein; Acyltransferase Protein; DNA Polymerase III Subunit Alpha; Acetyltransferase; Phospholipid/Glycerol Acyltransferase Hemolysin; Sulfolipid Biosynthesis Protein SqdA
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MADAIAPLPGRAALEHVSELLSVQVAASGLDRVPAQGRAIVVCNHPTGIADGVAVYDALKALRPDICFYANADAHRVCPG FEEVLIPVEWVEGKRTRERTRLTLQLTREAMEAERCLVIFPAGRLARRQPDGGLADPPWAPSAVSLARKYEAPVVPVHVA GPWSTLFHFFHGLSQELRDITLFHELLNKRGRRFDLTVGHPVAPERLAGDPAEATLALKAHVEGILPADPDRAFA
Sequences:
>Translated_235_residues MADAIAPLPGRAALEHVSELLSVQVAASGLDRVPAQGRAIVVCNHPTGIADGVAVYDALKALRPDICFYANADAHRVCPG FEEVLIPVEWVEGKRTRERTRLTLQLTREAMEAERCLVIFPAGRLARRQPDGGLADPPWAPSAVSLARKYEAPVVPVHVA GPWSTLFHFFHGLSQELRDITLFHELLNKRGRRFDLTVGHPVAPERLAGDPAEATLALKAHVEGILPADPDRAFA >Mature_234_residues ADAIAPLPGRAALEHVSELLSVQVAASGLDRVPAQGRAIVVCNHPTGIADGVAVYDALKALRPDICFYANADAHRVCPGF EEVLIPVEWVEGKRTRERTRLTLQLTREAMEAERCLVIFPAGRLARRQPDGGLADPPWAPSAVSLARKYEAPVVPVHVAG PWSTLFHFFHGLSQELRDITLFHELLNKRGRRFDLTVGHPVAPERLAGDPAEATLALKAHVEGILPADPDRAFA
Specific function: Unknown
COG id: COG3176
COG function: function code R; Putative hemolysin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25558; Mature: 25426
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADAIAPLPGRAALEHVSELLSVQVAASGLDRVPAQGRAIVVCNHPTGIADGVAVYDALK CCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHCCCCCCCEEEEECCCCCCHHHHHHHHHHH ALRPDICFYANADAHRVCPGFEEVLIPVEWVEGKRTRERTRLTLQLTREAMEAERCLVIF HHCCCEEEEECCCCCCCCCCHHHHEEEHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEE PAGRLARRQPDGGLADPPWAPSAVSLARKYEAPVVPVHVAGPWSTLFHFFHGLSQELRDI CCCHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH TLFHELLNKRGRRFDLTVGHPVAPERLAGDPAEATLALKAHVEGILPADPDRAFA HHHHHHHHHCCCEEEEEECCCCCHHHHCCCCHHHEEEEEEHHCCCCCCCCCCCCC >Mature Secondary Structure ADAIAPLPGRAALEHVSELLSVQVAASGLDRVPAQGRAIVVCNHPTGIADGVAVYDALK CCCCCCCCCHHHHHHHHHHHHHHHHHHCHHCCCCCCCEEEEECCCCCCHHHHHHHHHHH ALRPDICFYANADAHRVCPGFEEVLIPVEWVEGKRTRERTRLTLQLTREAMEAERCLVIF HHCCCEEEEECCCCCCCCCCHHHHEEEHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEE PAGRLARRQPDGGLADPPWAPSAVSLARKYEAPVVPVHVAGPWSTLFHFFHGLSQELRDI CCCHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH TLFHELLNKRGRRFDLTVGHPVAPERLAGDPAEATLALKAHVEGILPADPDRAFA HHHHHHHHHCCCEEEEEECCCCCHHHHCCCCHHHEEEEEEHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA