| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197103623
Identifier: 197103623
GI number: 197103623
Start: 146244
End: 146789
Strand: Direct
Name: 197103623
Synonym: PHZ_c0157
Alternate gene names: NA
Gene position: 146244-146789 (Clockwise)
Preceding gene: 197103621
Following gene: 197103624
Centisome position: 3.66
GC content: 68.86
Gene sequence:
>546_bases ATGTCGCAAGCCTTCGAAAAGCCCGCCCGCAAGTTCGGCTTCGGGACCTACTTCGCCCTGGCCATGGTTGCGGTGGCCGC GATCCTGACCCTGGCGCTCGGGCCGTTCTGGCTGGGCGTCTTCCGGATGGCCGGGGAGGCGCGGCCGCACGCCCCGAACC TTTCGCTGTTCGCCGGACTTTCGACGCCCATCAAGATCCACCTCGTCACCGCCCTGGCGGCGCTGGCGCTGGGCGGGGTG CTGATGGCCGCGCGCAAGGGGCGGACCTTCCACCGCCTCGCCGGCTGGACCTGGGTGGGACTGGTGTCGGTCAGCGCGGG CGTCACGGTCTTCATCACCAGCCTGAACAACGGGAGCTGGTCCTGGATCCACCTGTTCACCGGCTGGACCCTGCTGGTCC TGCCGCTGGCCGTCCTCGCGGCCAAGCGCCACGACGTCGCCCGGCACCGGCGGCGGATGATGGGCCTGTTCTACGGCGCC TTCGCGATCAACTTCTTCATCGCCTTCATTCCGGGTCGGGTGATGTGGGCGATGGTGTTCGGCTGA
Upstream 100 bases:
>100_bases CCGGCCGTCCCCCGACGCATCCGCTGTCGCGCCCTCAAGGCCACCCCGCCATCACCCGGTCCGACCGGCGCCGACGCGCC GCCTGGACCGGAGATAGAGC
Downstream 100 bases:
>100_bases GGCGCCGGCGGAGCCTTGCTCACGCTGGGGAAGCACCGTGAAGGATAACGCGGTTCAAGGGGGCCCGCGCGGTTGTCATC GAGGGGCGCGGCGCCTATAA
Product: conserved predicted membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MSQAFEKPARKFGFGTYFALAMVAVAAILTLALGPFWLGVFRMAGEARPHAPNLSLFAGLSTPIKIHLVTALAALALGGV LMAARKGRTFHRLAGWTWVGLVSVSAGVTVFITSLNNGSWSWIHLFTGWTLLVLPLAVLAAKRHDVARHRRRMMGLFYGA FAINFFIAFIPGRVMWAMVFG
Sequences:
>Translated_181_residues MSQAFEKPARKFGFGTYFALAMVAVAAILTLALGPFWLGVFRMAGEARPHAPNLSLFAGLSTPIKIHLVTALAALALGGV LMAARKGRTFHRLAGWTWVGLVSVSAGVTVFITSLNNGSWSWIHLFTGWTLLVLPLAVLAAKRHDVARHRRRMMGLFYGA FAINFFIAFIPGRVMWAMVFG >Mature_180_residues SQAFEKPARKFGFGTYFALAMVAVAAILTLALGPFWLGVFRMAGEARPHAPNLSLFAGLSTPIKIHLVTALAALALGGVL MAARKGRTFHRLAGWTWVGLVSVSAGVTVFITSLNNGSWSWIHLFTGWTLLVLPLAVLAAKRHDVARHRRRMMGLFYGAF AINFFIAFIPGRVMWAMVFG
Specific function: Unknown
COG id: COG5395
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19748; Mature: 19617
Theoretical pI: Translated: 12.51; Mature: 12.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQAFEKPARKFGFGTYFALAMVAVAAILTLALGPFWLGVFRMAGEARPHAPNLSLFAGL CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECC STPIKIHLVTALAALALGGVLMAARKGRTFHRLAGWTWVGLVSVSAGVTVFITSLNNGSW CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCE SWIHLFTGWTLLVLPLAVLAAKRHDVARHRRRMMGLFYGAFAINFFIAFIPGRVMWAMVF EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC G C >Mature Secondary Structure SQAFEKPARKFGFGTYFALAMVAVAAILTLALGPFWLGVFRMAGEARPHAPNLSLFAGL CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECC STPIKIHLVTALAALALGGVLMAARKGRTFHRLAGWTWVGLVSVSAGVTVFITSLNNGSW CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCE SWIHLFTGWTLLVLPLAVLAAKRHDVARHRRRMMGLFYGAFAINFFIAFIPGRVMWAMVF EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA