Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

Click here to switch to the map view.

The map label for this gene is 197103620

Identifier: 197103620

GI number: 197103620

Start: 143428

End: 144660

Strand: Reverse

Name: 197103620

Synonym: PHZ_c0154

Alternate gene names: NA

Gene position: 144660-143428 (Counterclockwise)

Preceding gene: 197103622

Following gene: 197103619

Centisome position: 3.62

GC content: 75.26

Gene sequence:

>1233_bases
ATGGCGCACGACCAGTTCGAAGATCACGGCCAGACCACCCGCCGGGGCGGGCGCCTCGTCCTGGCCGGCGTGGTCGGCGC
CTGCGCGCTGGGCGCGGGCCTGGGGCTGTGGGCGAGGCCCTCGGACGGGGAACGCCTGGCCGAGACCGCGCCGCCGCCCG
AGGCCGAGCCCGCCGGTTCCATGCGCAGCCTGCAGATCGTCGTCGACGATGCGCTTCCGCCGGTGGAGTCGCTGCTGGAG
GTCATGCCGCCGGACATGGGCGAGGGCGTGCGGCCCTACGCGCCCCGTCCTCCCATGGGCCCTCCCCTCGGGCCGCCCGC
CGGGCTGATGAAGGCCACCGCCCCGGTCGCAGCCCCGGTCACCGTCCTGCCGCCGCCGACCCCCGCCATCCAGCCCGCGC
CCCCGCCGAAAGCAGAGCCCGAGCCGAAGACCGAGGTGAAGGCGGAGCCGGCGTCCCCTGCCGCCAAGGCGAAGGCCGCC
GCCCGAAAGCCCCCGAAGCCGGAACCCAAGGCCGCGGCGAAGGCGGACAAGCCCGCGAAGACGGCCGAGAAGGCCCCGTC
GAAGAAGAAGGCCACGGTCGAAAAGAAGGCGGCGGACAAGAAGACGGAGAAGAAGGCCGAGAAGAAGAAGGCCGAAAACA
GGAAGGCGGGCGAGGTCGCCGGGGGCAAGCCGTCCAAGTCGTCCGCGGCCGCCGGGAAGTCCCCGCAGACGACGAAAACC
AAGGCCGTCAAGCCCAAGTCCAGGCCCGAGCCTGCGAAGGCCAAGGCCGCCGACGACAAGCGCAGACGCGAGGCCAAGCT
CGCCAAGGCCAAGGCCGCGGAAAAGCCCGCCAAGACCAAGCCGAAAACGCCCGCCCGAGCGGCGGCGGCGCCCAAAACGA
AGCCCGCGTCGAAGCCTGCGGCCCCGGCGGCCACGCCGAAGAAGACGGCGCCCAGCCCGCGCGGCGAGGGGCCGATGCGG
CTCGCCAAGGCCGCGCCCTGCGCCTCCCCCGATCCGGGCGAGGCCCTGGTCTGCGCCGACCCCCGGCTCGGCCAGCGCGA
CCGCCAGCTGCAGCGGGCGTTCCGCGACGCCGAGGCGGCGGGCGTGCCGGCGGCGGCCCTGCGCCGGCAGCAGGAGCGCT
GGCGTCAGGCCCGGGCGGCCGCGGCGCGCGACGGCTCCTGGGCGGTGGAGGACGTCTACGTCGCCCGGATCGCCGAGCTG
AACGACCTGGCCCGCGACGCCCGCGACTACTGA

Upstream 100 bases:

>100_bases
CTGGACTGGGAGAGCGTTCGGGTGGGGCGAACCTCGGGCGGCCGCGCCCGAGTCCCCTTCCGCCTGCGCATCGAGGGACC
CGTACCACGAGGGGTCGCCG

Downstream 100 bases:

>100_bases
GCCGGCCCGGGAACGACCTTCGCATTTGCAACCCTCCGGCGGGCTGCGGCTTTCGGAGCGCGAGGGACCGAGACGTAAGA
GATCGAGATTCATGGCGACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MAHDQFEDHGQTTRRGGRLVLAGVVGACALGAGLGLWARPSDGERLAETAPPPEAEPAGSMRSLQIVVDDALPPVESLLE
VMPPDMGEGVRPYAPRPPMGPPLGPPAGLMKATAPVAAPVTVLPPPTPAIQPAPPPKAEPEPKTEVKAEPASPAAKAKAA
ARKPPKPEPKAAAKADKPAKTAEKAPSKKKATVEKKAADKKTEKKAEKKKAENRKAGEVAGGKPSKSSAAAGKSPQTTKT
KAVKPKSRPEPAKAKAADDKRRREAKLAKAKAAEKPAKTKPKTPARAAAAPKTKPASKPAAPAATPKKTAPSPRGEGPMR
LAKAAPCASPDPGEALVCADPRLGQRDRQLQRAFRDAEAAGVPAAALRRQQERWRQARAAAARDGSWAVEDVYVARIAEL
NDLARDARDY

Sequences:

>Translated_410_residues
MAHDQFEDHGQTTRRGGRLVLAGVVGACALGAGLGLWARPSDGERLAETAPPPEAEPAGSMRSLQIVVDDALPPVESLLE
VMPPDMGEGVRPYAPRPPMGPPLGPPAGLMKATAPVAAPVTVLPPPTPAIQPAPPPKAEPEPKTEVKAEPASPAAKAKAA
ARKPPKPEPKAAAKADKPAKTAEKAPSKKKATVEKKAADKKTEKKAEKKKAENRKAGEVAGGKPSKSSAAAGKSPQTTKT
KAVKPKSRPEPAKAKAADDKRRREAKLAKAKAAEKPAKTKPKTPARAAAAPKTKPASKPAAPAATPKKTAPSPRGEGPMR
LAKAAPCASPDPGEALVCADPRLGQRDRQLQRAFRDAEAAGVPAAALRRQQERWRQARAAAARDGSWAVEDVYVARIAEL
NDLARDARDY
>Mature_409_residues
AHDQFEDHGQTTRRGGRLVLAGVVGACALGAGLGLWARPSDGERLAETAPPPEAEPAGSMRSLQIVVDDALPPVESLLEV
MPPDMGEGVRPYAPRPPMGPPLGPPAGLMKATAPVAAPVTVLPPPTPAIQPAPPPKAEPEPKTEVKAEPASPAAKAKAAA
RKPPKPEPKAAAKADKPAKTAEKAPSKKKATVEKKAADKKTEKKAEKKKAENRKAGEVAGGKPSKSSAAAGKSPQTTKTK
AVKPKSRPEPAKAKAADDKRRREAKLAKAKAAEKPAKTKPKTPARAAAAPKTKPASKPAAPAATPKKTAPSPRGEGPMRL
AKAAPCASPDPGEALVCADPRLGQRDRQLQRAFRDAEAAGVPAAALRRQQERWRQARAAAARDGSWAVEDVYVARIAELN
DLARDARDY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42705; Mature: 42574

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHDQFEDHGQTTRRGGRLVLAGVVGACALGAGLGLWARPSDGERLAETAPPPEAEPAGS
CCCCCCHHCCHHHHCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCC
MRSLQIVVDDALPPVESLLEVMPPDMGEGVRPYAPRPPMGPPLGPPAGLMKATAPVAAPV
CEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCE
TVLPPPTPAIQPAPPPKAEPEPKTEVKAEPASPAAKAKAAARKPPKPEPKAAAKADKPAK
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCHH
TAEKAPSKKKATVEKKAADKKTEKKAEKKKAENRKAGEVAGGKPSKSSAAAGKSPQTTKT
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH
KAVKPKSRPEPAKAKAADDKRRREAKLAKAKAAEKPAKTKPKTPARAAAAPKTKPASKPA
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCC
APAATPKKTAPSPRGEGPMRLAKAAPCASPDPGEALVCADPRLGQRDRQLQRAFRDAEAA
CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHC
GVPAAALRRQQERWRQARAAAARDGSWAVEDVYVARIAELNDLARDARDY
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AHDQFEDHGQTTRRGGRLVLAGVVGACALGAGLGLWARPSDGERLAETAPPPEAEPAGS
CCCCCHHCCHHHHCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCC
MRSLQIVVDDALPPVESLLEVMPPDMGEGVRPYAPRPPMGPPLGPPAGLMKATAPVAAPV
CEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCE
TVLPPPTPAIQPAPPPKAEPEPKTEVKAEPASPAAKAKAAARKPPKPEPKAAAKADKPAK
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCHH
TAEKAPSKKKATVEKKAADKKTEKKAEKKKAENRKAGEVAGGKPSKSSAAAGKSPQTTKT
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH
KAVKPKSRPEPAKAKAADDKRRREAKLAKAKAAEKPAKTKPKTPARAAAAPKTKPASKPA
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCC
APAATPKKTAPSPRGEGPMRLAKAAPCASPDPGEALVCADPRLGQRDRQLQRAFRDAEAA
CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHC
GVPAAALRRQQERWRQARAAAARDGSWAVEDVYVARIAELNDLARDARDY
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA