| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197103620
Identifier: 197103620
GI number: 197103620
Start: 143428
End: 144660
Strand: Reverse
Name: 197103620
Synonym: PHZ_c0154
Alternate gene names: NA
Gene position: 144660-143428 (Counterclockwise)
Preceding gene: 197103622
Following gene: 197103619
Centisome position: 3.62
GC content: 75.26
Gene sequence:
>1233_bases ATGGCGCACGACCAGTTCGAAGATCACGGCCAGACCACCCGCCGGGGCGGGCGCCTCGTCCTGGCCGGCGTGGTCGGCGC CTGCGCGCTGGGCGCGGGCCTGGGGCTGTGGGCGAGGCCCTCGGACGGGGAACGCCTGGCCGAGACCGCGCCGCCGCCCG AGGCCGAGCCCGCCGGTTCCATGCGCAGCCTGCAGATCGTCGTCGACGATGCGCTTCCGCCGGTGGAGTCGCTGCTGGAG GTCATGCCGCCGGACATGGGCGAGGGCGTGCGGCCCTACGCGCCCCGTCCTCCCATGGGCCCTCCCCTCGGGCCGCCCGC CGGGCTGATGAAGGCCACCGCCCCGGTCGCAGCCCCGGTCACCGTCCTGCCGCCGCCGACCCCCGCCATCCAGCCCGCGC CCCCGCCGAAAGCAGAGCCCGAGCCGAAGACCGAGGTGAAGGCGGAGCCGGCGTCCCCTGCCGCCAAGGCGAAGGCCGCC GCCCGAAAGCCCCCGAAGCCGGAACCCAAGGCCGCGGCGAAGGCGGACAAGCCCGCGAAGACGGCCGAGAAGGCCCCGTC GAAGAAGAAGGCCACGGTCGAAAAGAAGGCGGCGGACAAGAAGACGGAGAAGAAGGCCGAGAAGAAGAAGGCCGAAAACA GGAAGGCGGGCGAGGTCGCCGGGGGCAAGCCGTCCAAGTCGTCCGCGGCCGCCGGGAAGTCCCCGCAGACGACGAAAACC AAGGCCGTCAAGCCCAAGTCCAGGCCCGAGCCTGCGAAGGCCAAGGCCGCCGACGACAAGCGCAGACGCGAGGCCAAGCT CGCCAAGGCCAAGGCCGCGGAAAAGCCCGCCAAGACCAAGCCGAAAACGCCCGCCCGAGCGGCGGCGGCGCCCAAAACGA AGCCCGCGTCGAAGCCTGCGGCCCCGGCGGCCACGCCGAAGAAGACGGCGCCCAGCCCGCGCGGCGAGGGGCCGATGCGG CTCGCCAAGGCCGCGCCCTGCGCCTCCCCCGATCCGGGCGAGGCCCTGGTCTGCGCCGACCCCCGGCTCGGCCAGCGCGA CCGCCAGCTGCAGCGGGCGTTCCGCGACGCCGAGGCGGCGGGCGTGCCGGCGGCGGCCCTGCGCCGGCAGCAGGAGCGCT GGCGTCAGGCCCGGGCGGCCGCGGCGCGCGACGGCTCCTGGGCGGTGGAGGACGTCTACGTCGCCCGGATCGCCGAGCTG AACGACCTGGCCCGCGACGCCCGCGACTACTGA
Upstream 100 bases:
>100_bases CTGGACTGGGAGAGCGTTCGGGTGGGGCGAACCTCGGGCGGCCGCGCCCGAGTCCCCTTCCGCCTGCGCATCGAGGGACC CGTACCACGAGGGGTCGCCG
Downstream 100 bases:
>100_bases GCCGGCCCGGGAACGACCTTCGCATTTGCAACCCTCCGGCGGGCTGCGGCTTTCGGAGCGCGAGGGACCGAGACGTAAGA GATCGAGATTCATGGCGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MAHDQFEDHGQTTRRGGRLVLAGVVGACALGAGLGLWARPSDGERLAETAPPPEAEPAGSMRSLQIVVDDALPPVESLLE VMPPDMGEGVRPYAPRPPMGPPLGPPAGLMKATAPVAAPVTVLPPPTPAIQPAPPPKAEPEPKTEVKAEPASPAAKAKAA ARKPPKPEPKAAAKADKPAKTAEKAPSKKKATVEKKAADKKTEKKAEKKKAENRKAGEVAGGKPSKSSAAAGKSPQTTKT KAVKPKSRPEPAKAKAADDKRRREAKLAKAKAAEKPAKTKPKTPARAAAAPKTKPASKPAAPAATPKKTAPSPRGEGPMR LAKAAPCASPDPGEALVCADPRLGQRDRQLQRAFRDAEAAGVPAAALRRQQERWRQARAAAARDGSWAVEDVYVARIAEL NDLARDARDY
Sequences:
>Translated_410_residues MAHDQFEDHGQTTRRGGRLVLAGVVGACALGAGLGLWARPSDGERLAETAPPPEAEPAGSMRSLQIVVDDALPPVESLLE VMPPDMGEGVRPYAPRPPMGPPLGPPAGLMKATAPVAAPVTVLPPPTPAIQPAPPPKAEPEPKTEVKAEPASPAAKAKAA ARKPPKPEPKAAAKADKPAKTAEKAPSKKKATVEKKAADKKTEKKAEKKKAENRKAGEVAGGKPSKSSAAAGKSPQTTKT KAVKPKSRPEPAKAKAADDKRRREAKLAKAKAAEKPAKTKPKTPARAAAAPKTKPASKPAAPAATPKKTAPSPRGEGPMR LAKAAPCASPDPGEALVCADPRLGQRDRQLQRAFRDAEAAGVPAAALRRQQERWRQARAAAARDGSWAVEDVYVARIAEL NDLARDARDY >Mature_409_residues AHDQFEDHGQTTRRGGRLVLAGVVGACALGAGLGLWARPSDGERLAETAPPPEAEPAGSMRSLQIVVDDALPPVESLLEV MPPDMGEGVRPYAPRPPMGPPLGPPAGLMKATAPVAAPVTVLPPPTPAIQPAPPPKAEPEPKTEVKAEPASPAAKAKAAA RKPPKPEPKAAAKADKPAKTAEKAPSKKKATVEKKAADKKTEKKAEKKKAENRKAGEVAGGKPSKSSAAAGKSPQTTKTK AVKPKSRPEPAKAKAADDKRRREAKLAKAKAAEKPAKTKPKTPARAAAAPKTKPASKPAAPAATPKKTAPSPRGEGPMRL AKAAPCASPDPGEALVCADPRLGQRDRQLQRAFRDAEAAGVPAAALRRQQERWRQARAAAARDGSWAVEDVYVARIAELN DLARDARDY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42705; Mature: 42574
Theoretical pI: Translated: 10.85; Mature: 10.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHDQFEDHGQTTRRGGRLVLAGVVGACALGAGLGLWARPSDGERLAETAPPPEAEPAGS CCCCCCHHCCHHHHCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCC MRSLQIVVDDALPPVESLLEVMPPDMGEGVRPYAPRPPMGPPLGPPAGLMKATAPVAAPV CEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCE TVLPPPTPAIQPAPPPKAEPEPKTEVKAEPASPAAKAKAAARKPPKPEPKAAAKADKPAK EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCHH TAEKAPSKKKATVEKKAADKKTEKKAEKKKAENRKAGEVAGGKPSKSSAAAGKSPQTTKT HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH KAVKPKSRPEPAKAKAADDKRRREAKLAKAKAAEKPAKTKPKTPARAAAAPKTKPASKPA HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCC APAATPKKTAPSPRGEGPMRLAKAAPCASPDPGEALVCADPRLGQRDRQLQRAFRDAEAA CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHC GVPAAALRRQQERWRQARAAAARDGSWAVEDVYVARIAELNDLARDARDY CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AHDQFEDHGQTTRRGGRLVLAGVVGACALGAGLGLWARPSDGERLAETAPPPEAEPAGS CCCCCHHCCHHHHCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCC MRSLQIVVDDALPPVESLLEVMPPDMGEGVRPYAPRPPMGPPLGPPAGLMKATAPVAAPV CEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCE TVLPPPTPAIQPAPPPKAEPEPKTEVKAEPASPAAKAKAAARKPPKPEPKAAAKADKPAK EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCHH TAEKAPSKKKATVEKKAADKKTEKKAEKKKAENRKAGEVAGGKPSKSSAAAGKSPQTTKT HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH KAVKPKSRPEPAKAKAADDKRRREAKLAKAKAAEKPAKTKPKTPARAAAAPKTKPASKPA HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCC APAATPKKTAPSPRGEGPMRLAKAAPCASPDPGEALVCADPRLGQRDRQLQRAFRDAEAA CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHC GVPAAALRRQQERWRQARAAAARDGSWAVEDVYVARIAELNDLARDARDY CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA