Click here to switch to the map view.

The map label for this gene is 197103622

Identifier: 197103622

GI number: 197103622

Start: 145331

End: 146095

Strand: Reverse

Name: 197103622

Synonym: PHZ_c0156

Alternate gene names: NA

Gene position: 146095-145331 (Counterclockwise)

Preceding gene: 197103628

Following gene: 197103620

Centisome position: 3.66

GC content: 73.73

Gene sequence:

>765_bases
ATGAGCCGCCTTCTCGTCCGGCTGACGCCCTACGACGACCTCGCCGGCTGGCTGCGCGGCCTGGCGGTGACCGTGGCCTT
CGCCCTCTTCATGACCCTGACGGGCGCCTTCGACACCGGGGACGCGCCGCTGGCGCGCCGCGGCGCCTATTGGCTGGGAG
TGATGTTCCTGGGCTACCTCTGGGGCGGCTTCGTCGCGCGCCGCGTCTTCCGCGCCCCGCGCGCGGGGCCCAGGCCCTGG
TGGATCGTGGGGCCGGCGGTGTCGGCGGTCATGGCCGCCCCGTTCACGCTGATCGTCTGGGGCGGAACCCGGCTCGTCCT
GGGATCGAAGCTGCCGGCCGCGGCGCTGCCGGTCCTGTTCCTCTACGTCTTCGTCGTCGCCCTGGCGATCACCGCCCTCT
TCAGCCTGATCGAGGCCCGCCGCGGGGCCGACCCCGCCGCTCCTGCGGCGCCGCCGAAGTTCCTGGACCGCCTGCCCCTG
AAGCTCCGCGGCGCCGAGGTCTGGGCCGTCGAGGCCGAGGACCATTACCTCAGGCTCCACACCTCCAGGGGTCAGGACCT
GATCCTGATGCGGCTGGCCGACGCCGTGGCCGAACTGGAGGGGCTCGAGGGCCTGCAGGTGCACCGCTCGTGGTGGGTCG
CCCGGGACGCCATCGTGGACGCCAAGCGCGGCGACGGCCGGGCCACCCTGACCCTGAAGGACGGCGCCCAGGTTCCCGTC
AGCCGCACCTACGCCGGCCAGCTGCGGGACCGGGGCTGGATCTAG

Upstream 100 bases:

>100_bases
ATGGCGGGGTGGCCTTGAGGGCGCGACAGCGGATGCGTCGGGGGACGGCCGGGCTTCGCGAACAGCCGCGGTCCGCCGTT
CACGCTTCGCGAGCGGCGGC

Downstream 100 bases:

>100_bases
CGCCGGATCCGGCGTTGGGCGCGGCGGGCCATCCAGTCCTCCCGGCTCTGGCCCCAGACGTCGACGGCCACGTTCATCGG
CGGCGGCAGCACGGCCTGGC

Product: response regulator of the LytR/AlgR family

Products: NA

Alternate protein names: Transcriptional Regulator LytR/AlgR Family; LytR/AlgR-Family Transcriptional Regulator; Sensory Transduction Protein LytT; LytR/AlgR Family Transcriptional Regulator; AlgR/AgrA/LytR Family Transcriptional Regulator; Response Regulator LytR/AlgR Family; Response Regulator Of LytR/AlgR Family

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MSRLLVRLTPYDDLAGWLRGLAVTVAFALFMTLTGAFDTGDAPLARRGAYWLGVMFLGYLWGGFVARRVFRAPRAGPRPW
WIVGPAVSAVMAAPFTLIVWGGTRLVLGSKLPAAALPVLFLYVFVVALAITALFSLIEARRGADPAAPAAPPKFLDRLPL
KLRGAEVWAVEAEDHYLRLHTSRGQDLILMRLADAVAELEGLEGLQVHRSWWVARDAIVDAKRGDGRATLTLKDGAQVPV
SRTYAGQLRDRGWI

Sequences:

>Translated_254_residues
MSRLLVRLTPYDDLAGWLRGLAVTVAFALFMTLTGAFDTGDAPLARRGAYWLGVMFLGYLWGGFVARRVFRAPRAGPRPW
WIVGPAVSAVMAAPFTLIVWGGTRLVLGSKLPAAALPVLFLYVFVVALAITALFSLIEARRGADPAAPAAPPKFLDRLPL
KLRGAEVWAVEAEDHYLRLHTSRGQDLILMRLADAVAELEGLEGLQVHRSWWVARDAIVDAKRGDGRATLTLKDGAQVPV
SRTYAGQLRDRGWI
>Mature_253_residues
SRLLVRLTPYDDLAGWLRGLAVTVAFALFMTLTGAFDTGDAPLARRGAYWLGVMFLGYLWGGFVARRVFRAPRAGPRPWW
IVGPAVSAVMAAPFTLIVWGGTRLVLGSKLPAAALPVLFLYVFVVALAITALFSLIEARRGADPAAPAAPPKFLDRLPLK
LRGAEVWAVEAEDHYLRLHTSRGQDLILMRLADAVAELEGLEGLQVHRSWWVARDAIVDAKRGDGRATLTLKDGAQVPVS
RTYAGQLRDRGWI

Specific function: Unknown

COG id: COG3279

COG function: function code KT; Response regulator of the LytR/AlgR family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27799; Mature: 27668

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: PS50930 HTH_LYTTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLLVRLTPYDDLAGWLRGLAVTVAFALFMTLTGAFDTGDAPLARRGAYWLGVMFLGYL
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
WGGFVARRVFRAPRAGPRPWWIVGPAVSAVMAAPFTLIVWGGTRLVLGSKLPAAALPVLF
HHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHCCEEEEEECCEEEEECCCCCHHHHHHHH
LYVFVVALAITALFSLIEARRGADPAAPAAPPKFLDRLPLKLRGAEVWAVEAEDHYLRLH
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCEEECCEEEEEECCCCEEEEE
TSRGQDLILMRLADAVAELEGLEGLQVHRSWWVARDAIVDAKRGDGRATLTLKDGAQVPV
CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCC
SRTYAGQLRDRGWI
CHHHHHHHHCCCCC
>Mature Secondary Structure 
SRLLVRLTPYDDLAGWLRGLAVTVAFALFMTLTGAFDTGDAPLARRGAYWLGVMFLGYL
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
WGGFVARRVFRAPRAGPRPWWIVGPAVSAVMAAPFTLIVWGGTRLVLGSKLPAAALPVLF
HHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHCCEEEEEECCEEEEECCCCCHHHHHHHH
LYVFVVALAITALFSLIEARRGADPAAPAAPPKFLDRLPLKLRGAEVWAVEAEDHYLRLH
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCEEECCEEEEEECCCCEEEEE
TSRGQDLILMRLADAVAELEGLEGLQVHRSWWVARDAIVDAKRGDGRATLTLKDGAQVPV
CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCC
SRTYAGQLRDRGWI
CHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA