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The map label for this gene is flmB [H]

Identifier: 197103547

GI number: 197103547

Start: 76467

End: 77624

Strand: Direct

Name: flmB [H]

Synonym: PHZ_c0081

Alternate gene names: 197103547

Gene position: 76467-77624 (Clockwise)

Preceding gene: 197103546

Following gene: 197103549

Centisome position: 1.91

GC content: 73.83

Gene sequence:

>1158_bases
GTGGCGGTGCTTCCCTACGGCCGGCAGACGATCGAGGACGACGACATCGCCGCCGTCGCCGAGGCCCTGCGCGGCGACTT
CCTGACCACCGGCCCGACCGTCGAGGCGTTCGAGCGGGCGTTCGCCGAGGTGGTGGGGGCAAGGCACGCCGTCGCCTGCG
CCAACGGCACGGCGGCGCTGCACCTGGCCATGCTGGCGCTGGACGTTCGCCCCGGCGAGGCGGTGATCGCGCCTGCCATC
ACCTTCCTGGCGACGGCCAATTGCGCCCGGTATGTCGGCGCCGAGGTGGTGTTCGCCGACGTCGATCCCGACACCGGCCT
GATGACGCCGCAGACCCTGGCCGAGGCGCTGGGCCGGCTGGACGGGCGCCGGCTGCGGGCCGTCCTGCCCGTCCACCTGC
GCGGCGACGCGGCCGAGCTGCCGGCCCTGGCGGACCTGGCCCGCAGCGCCGGCGCGGTGCTCGTCGAAGACGCGCCGCAC
GCCCTCGGAACGACGATGCGCTTCAGCGATAGGGCGGAACGGGTCGGCGATGTGCGCCACTCCGCCATGGCGACGTTCTC
GTTCCACCCGGTGAAGACCATCGCCACCGGCGAGGGCGGCATGGTCACGACGAACGATCCCGAGCTCGCCACGCGCCTGC
GGACCTTCCGCAGCCACGGCATGGTCCGGCCCGAGGGCTGCGAGCCCTGGTGGTACGAGATGCCCGAGCTGGGCTTCAAC
TACCGCCTGCCCGACGTGCTGTGCGCCCTGGGCCTCTCGCAGCTGAAGAAGCTGCCCAGGTTCGCGGCGCGGCGACGGGC
CCTGGCCGGCCTCTACGCCGAGGCGCTCGCGCCGCTAGCGCCGGTGGTGCGTCCCGCGGCCCGCCCCGCCTGGAGCGATC
CGGTGCTGCACCTGATGACCGTGCTGATCGATTTCGAGGCGGCCGGCCGCACGCGCCTTGAGGTCGTGGAGGCCCTGAAG
GCGCGCGGGATCGGCAGCCAGGTGCACTACATCCCGGTCCACCGCCAGCCGTACTACCGGGACCGGTACGGCGCCCTGGA
GCTGCCCGGGGCCGAGGCCTGGTACGCGCGCTGCCTGTCCCTGCCGCTCTATCCGGGGATGGCGGATGGCGACGTGGCGA
AGGTGGCGGGCGCGCTCGAGGAGGCGCTGGGCCTCTAG

Upstream 100 bases:

>100_bases
GCCTCGGACACCAACGACGACTGGCTGGGCGCCGAGGCCTTCCTCGCCATGCTGGGCGAAGACGCCCCCGAGCGCCGCCG
CCGGCGCGCGACCGACTGAG

Downstream 100 bases:

>100_bases
GCCGCCAGGCCCGCCTGCTGGATCAGCTCGCGCATGCTGTCGACCTGGTCCGGGGTCTGGGACAGCTCGATGCGGATGTC
GTCGTGGCGGGCGAGCTTCA

Product: flagellin modification protein FlmB

Products: NA

Alternate protein names: UDP-(beta-L-threo-pentapyranosyl-4''-ulose diphosphate) aminotransferase; UDP-Ara4O aminotransferase; UDP-4-amino-4-deoxy-L-arabinose aminotransferase [H]

Number of amino acids: Translated: 385; Mature: 384

Protein sequence:

>385_residues
MAVLPYGRQTIEDDDIAAVAEALRGDFLTTGPTVEAFERAFAEVVGARHAVACANGTAALHLAMLALDVRPGEAVIAPAI
TFLATANCARYVGAEVVFADVDPDTGLMTPQTLAEALGRLDGRRLRAVLPVHLRGDAAELPALADLARSAGAVLVEDAPH
ALGTTMRFSDRAERVGDVRHSAMATFSFHPVKTIATGEGGMVTTNDPELATRLRTFRSHGMVRPEGCEPWWYEMPELGFN
YRLPDVLCALGLSQLKKLPRFAARRRALAGLYAEALAPLAPVVRPAARPAWSDPVLHLMTVLIDFEAAGRTRLEVVEALK
ARGIGSQVHYIPVHRQPYYRDRYGALELPGAEAWYARCLSLPLYPGMADGDVAKVAGALEEALGL

Sequences:

>Translated_385_residues
MAVLPYGRQTIEDDDIAAVAEALRGDFLTTGPTVEAFERAFAEVVGARHAVACANGTAALHLAMLALDVRPGEAVIAPAI
TFLATANCARYVGAEVVFADVDPDTGLMTPQTLAEALGRLDGRRLRAVLPVHLRGDAAELPALADLARSAGAVLVEDAPH
ALGTTMRFSDRAERVGDVRHSAMATFSFHPVKTIATGEGGMVTTNDPELATRLRTFRSHGMVRPEGCEPWWYEMPELGFN
YRLPDVLCALGLSQLKKLPRFAARRRALAGLYAEALAPLAPVVRPAARPAWSDPVLHLMTVLIDFEAAGRTRLEVVEALK
ARGIGSQVHYIPVHRQPYYRDRYGALELPGAEAWYARCLSLPLYPGMADGDVAKVAGALEEALGL
>Mature_384_residues
AVLPYGRQTIEDDDIAAVAEALRGDFLTTGPTVEAFERAFAEVVGARHAVACANGTAALHLAMLALDVRPGEAVIAPAIT
FLATANCARYVGAEVVFADVDPDTGLMTPQTLAEALGRLDGRRLRAVLPVHLRGDAAELPALADLARSAGAVLVEDAPHA
LGTTMRFSDRAERVGDVRHSAMATFSFHPVKTIATGEGGMVTTNDPELATRLRTFRSHGMVRPEGCEPWWYEMPELGFNY
RLPDVLCALGLSQLKKLPRFAARRRALAGLYAEALAPLAPVVRPAARPAWSDPVLHLMTVLIDFEAAGRTRLEVVEALKA
RGIGSQVHYIPVHRQPYYRDRYGALELPGAEAWYARCLSLPLYPGMADGDVAKVAGALEEALGL

Specific function: Catalyzes the conversion of UDP-4-keto-arabinose (UDP- Ara4O) to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family. ArnB subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=387, Percent_Identity=35.6589147286822, Blast_Score=231, Evalue=9e-62,
Organism=Escherichia coli, GI2367285, Length=322, Percent_Identity=32.9192546583851, Blast_Score=124, Evalue=9e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022850
- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: =2.6.1.87 [H]

Molecular weight: Translated: 41391; Mature: 41260

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVLPYGRQTIEDDDIAAVAEALRGDFLTTGPTVEAFERAFAEVVGARHAVACANGTAAL
CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHEEECCCHHHH
HLAMLALDVRPGEAVIAPAITFLATANCARYVGAEVVFADVDPDTGLMTPQTLAEALGRL
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHCC
DGRRLRAVLPVHLRGDAAELPALADLARSAGAVLVEDAPHALGTTMRFSDRAERVGDVRH
CCCEEEEEEEEEECCCHHHCHHHHHHHHHCCEEEEECCCHHHCCCHHHHHHHHHHHHHHH
SAMATFSFHPVKTIATGEGGMVTTNDPELATRLRTFRSHGMVRPEGCEPWWYEMPELGFN
HHHHEEECCCEEEEECCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCC
YRLPDVLCALGLSQLKKLPRFAARRRALAGLYAEALAPLAPVVRPAARPAWSDPVLHLMT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
VLIDFEAAGRTRLEVVEALKARGIGSQVHYIPVHRQPYYRDRYGALELPGAEAWYARCLS
HHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCEECCCHHHHHHHHHH
LPLYPGMADGDVAKVAGALEEALGL
CCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AVLPYGRQTIEDDDIAAVAEALRGDFLTTGPTVEAFERAFAEVVGARHAVACANGTAAL
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHEEECCCHHHH
HLAMLALDVRPGEAVIAPAITFLATANCARYVGAEVVFADVDPDTGLMTPQTLAEALGRL
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHCC
DGRRLRAVLPVHLRGDAAELPALADLARSAGAVLVEDAPHALGTTMRFSDRAERVGDVRH
CCCEEEEEEEEEECCCHHHCHHHHHHHHHCCEEEEECCCHHHCCCHHHHHHHHHHHHHHH
SAMATFSFHPVKTIATGEGGMVTTNDPELATRLRTFRSHGMVRPEGCEPWWYEMPELGFN
HHHHEEECCCEEEEECCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCC
YRLPDVLCALGLSQLKKLPRFAARRRALAGLYAEALAPLAPVVRPAARPAWSDPVLHLMT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
VLIDFEAAGRTRLEVVEALKARGIGSQVHYIPVHRQPYYRDRYGALELPGAEAWYARCLS
HHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCEECCCHHHHHHHHHH
LPLYPGMADGDVAKVAGALEEALGL
CCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA