| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is flmA [H]
Identifier: 197103546
GI number: 197103546
Start: 75413
End: 76465
Strand: Direct
Name: flmA [H]
Synonym: PHZ_c0080
Alternate gene names: 197103546
Gene position: 75413-76465 (Clockwise)
Preceding gene: 197103544
Following gene: 197103547
Centisome position: 1.89
GC content: 69.23
Gene sequence:
>1053_bases TTGGGACGATTTGCGCCGACCGCCCTGGACCTCGACGGCAAGGTCATCCTCGTGACCGGCGGCACCGGCTCGTTCGGGCG CCGCTTCATCGAGACCGTCCTGCAGCGCTCGACGCCCCGCAAGCTGATCGTCTACTCGCGCGACGAGCTGAAGCAGAGCG AGATGCAGATCGACCTCGCCGAGCGGTTCGGGCGCGAGAAGCTGGCGCACATGCGCTTCTTCCTGGGCGACGTGCGGGAC CGCGAGCGGCTGAGCCTGGCGTTCCGCGGCGTCGACGTGGTGATCCACGCCGCCGCCCTGAAGCAGGTGCCCGCGGCCGA GTACAATCCCTCGGAGTGCATCCACACGAACGTGCTGGGCGCCGAGAACGTGGTCCGCGCCTGCCTCGCCAACCGGGTGC AGAAGGTGGTGGCGCTCTCCACCGACAAGGCCTGCAATCCGATCAACCTCTACGGGGCCACCAAGCTCGCCTCGGACAAG ACCTTCGTGGCGGCCAACAACCTGTCGGGCGACATCGGCACGCGGTTCTCGGTGGTGCGCTACGGCAACGTGGTCGGCTC GCGCGGCTCGGTGGCGCCGCTGTTCCAGCGCCTGATCGCCCGCGGCGCGGCCGAGCTGCCGATCACCGACCCGCGCATGA CCCGGTTCCTGATCACCCTGGACGAGGGCGTGGACTTCGTCCTCTCGTCGCTGCAGCTCATGCGCGGCGGCGAGATCTTC GTGCCCAAGATCCCTTCGATGAAGGTCGTGGACATCGCCGCCGCCATGGCGCCGAAGCTGCCCACCAAGGTGATCGGCAT CCGCCCGGGCGAGAAGCTGCACGAGATGATGATCTCGTCGGACGATGCGCGCACCACGCTGGACCTCGGCGACCGCTACG TCATCGAGCCGGCCTTCGCCGAGTACACCCGCGAGCCGCTGGAAGGCGGCGAGGTCGCGGAAGGCTTCTCCTACGCCTCG GACACCAACGACGACTGGCTGGGCGCCGAGGCCTTCCTCGCCATGCTGGGCGAAGACGCCCCCGAGCGCCGCCGCCGGCG CGCGACCGACTGA
Upstream 100 bases:
>100_bases CGGTCCATGGGGCGATGATGGCCCCGCGCATGGTTAGCGGTCTCTTTACGCGGCGGGCCGGACAGTCGGCTCCGATACGA ATCGCTGCCGGGAGCCCCGC
Downstream 100 bases:
>100_bases GGTGGCGGTGCTTCCCTACGGCCGGCAGACGATCGAGGACGACGACATCGCCGCCGTCGCCGAGGCCCTGCGCGGCGACT TCCTGACCACCGGCCCGACC
Product: flagellin modification protein FlmA
Products: NA
Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MGRFAPTALDLDGKVILVTGGTGSFGRRFIETVLQRSTPRKLIVYSRDELKQSEMQIDLAERFGREKLAHMRFFLGDVRD RERLSLAFRGVDVVIHAAALKQVPAAEYNPSECIHTNVLGAENVVRACLANRVQKVVALSTDKACNPINLYGATKLASDK TFVAANNLSGDIGTRFSVVRYGNVVGSRGSVAPLFQRLIARGAAELPITDPRMTRFLITLDEGVDFVLSSLQLMRGGEIF VPKIPSMKVVDIAAAMAPKLPTKVIGIRPGEKLHEMMISSDDARTTLDLGDRYVIEPAFAEYTREPLEGGEVAEGFSYAS DTNDDWLGAEAFLAMLGEDAPERRRRRATD
Sequences:
>Translated_350_residues MGRFAPTALDLDGKVILVTGGTGSFGRRFIETVLQRSTPRKLIVYSRDELKQSEMQIDLAERFGREKLAHMRFFLGDVRD RERLSLAFRGVDVVIHAAALKQVPAAEYNPSECIHTNVLGAENVVRACLANRVQKVVALSTDKACNPINLYGATKLASDK TFVAANNLSGDIGTRFSVVRYGNVVGSRGSVAPLFQRLIARGAAELPITDPRMTRFLITLDEGVDFVLSSLQLMRGGEIF VPKIPSMKVVDIAAAMAPKLPTKVIGIRPGEKLHEMMISSDDARTTLDLGDRYVIEPAFAEYTREPLEGGEVAEGFSYAS DTNDDWLGAEAFLAMLGEDAPERRRRRATD >Mature_349_residues GRFAPTALDLDGKVILVTGGTGSFGRRFIETVLQRSTPRKLIVYSRDELKQSEMQIDLAERFGREKLAHMRFFLGDVRDR ERLSLAFRGVDVVIHAAALKQVPAAEYNPSECIHTNVLGAENVVRACLANRVQKVVALSTDKACNPINLYGATKLASDKT FVAANNLSGDIGTRFSVVRYGNVVGSRGSVAPLFQRLIARGAAELPITDPRMTRFLITLDEGVDFVLSSLQLMRGGEIFV PKIPSMKVVDIAAAMAPKLPTKVIGIRPGEKLHEMMISSDDARTTLDLGDRYVIEPAFAEYTREPLEGGEVAEGFSYASD TNDDWLGAEAFLAMLGEDAPERRRRRATD
Specific function: Epimerizes UDP-galactose to UDP-glucose [H]
COG id: COG1086
COG function: function code MG; Predicted nucleoside-diphosphate sugar epimerases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polysaccharide synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR003869 - InterPro: IPR013692 [H]
Pfam domain/function: PF08485 Polysacc_syn_2C; PF02719 Polysacc_synt_2 [H]
EC number: =5.1.3.2 [H]
Molecular weight: Translated: 38435; Mature: 38303
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRFAPTALDLDGKVILVTGGTGSFGRRFIETVLQRSTPRKLIVYSRDELKQSEMQIDLA CCCCCCCEECCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHH ERFGREKLAHMRFFLGDVRDRERLSLAFRGVDVVIHAAALKQVPAAEYNPSECIHTNVLG HHCCHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCC AENVVRACLANRVQKVVALSTDKACNPINLYGATKLASDKTFVAANNLSGDIGTRFSVVR HHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCEECCCCEEEEECCCCCCCCCCEEEEE YGNVVGSRGSVAPLFQRLIARGAAELPITDPRMTRFLITLDEGVDFVLSSLQLMRGGEIF ECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCEE VPKIPSMKVVDIAAAMAPKLPTKVIGIRPGEKLHEMMISSDDARTTLDLGDRYVIEPAFA ECCCCCCHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCCCCCEEEECCCEEEECCHHH EYTREPLEGGEVAEGFSYASDTNDDWLGAEAFLAMLGEDAPERRRRRATD HHHCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHCCCC >Mature Secondary Structure GRFAPTALDLDGKVILVTGGTGSFGRRFIETVLQRSTPRKLIVYSRDELKQSEMQIDLA CCCCCCEECCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHH ERFGREKLAHMRFFLGDVRDRERLSLAFRGVDVVIHAAALKQVPAAEYNPSECIHTNVLG HHCCHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCC AENVVRACLANRVQKVVALSTDKACNPINLYGATKLASDKTFVAANNLSGDIGTRFSVVR HHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCEECCCCEEEEECCCCCCCCCCEEEEE YGNVVGSRGSVAPLFQRLIARGAAELPITDPRMTRFLITLDEGVDFVLSSLQLMRGGEIF ECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCEE VPKIPSMKVVDIAAAMAPKLPTKVIGIRPGEKLHEMMISSDDARTTLDLGDRYVIEPAFA ECCCCCCHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCCCCCEEEECCCEEEECCHHH EYTREPLEGGEVAEGFSYASDTNDDWLGAEAFLAMLGEDAPERRRRRATD HHHCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA