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The map label for this gene is pys [H]

Identifier: 197103529

GI number: 197103529

Start: 57173

End: 58762

Strand: Direct

Name: pys [H]

Synonym: PHZ_c0063

Alternate gene names: 197103529

Gene position: 57173-58762 (Clockwise)

Preceding gene: 197103528

Following gene: 197103534

Centisome position: 1.43

GC content: 72.33

Gene sequence:

>1590_bases
GTGACGGACGCCATCGTGATCGGGGCCGGCCACAACGGCCTGACCTGCGCGGCCTACCTGGCCGCCGCCGGACTGAAGGT
GACCGTCCTGGAGCGCCGCGGCGTCGTCGGCGGCGCGGCGGTGACCGAGGAATTCCATCCCGGCTTCCGCAACTCGGTCG
CCAGCTACACCGTCAGCCTGCTGAACCCGAAGGTCATCCGCGACCTGGAGCTCGCCCGCCACGGCCTGCGCGTGGTCGAA
CGGAAGATGTCGAACTTCCTGCCTTTGGACGGCGACTCGCTGTCGGTGGGCGATGGACGCACGAAGGCCGAGGTGGCCCG
CTTCTCGCCGCGCGACGCCGAGCGGCTCGACGCCTATGGCGAGCGCCTGGAACGGATCGCCGACGTGCTGCGCGAGCTGG
TGCTGCAGACCCCGCCCAACCTCGTCGAGGGCGGCCTCGCCCAGGCGCTGCCCGAGCTCATCAGGAGCGCCAGCCTGGGA
CGGCGGCTTTCGAAGCTGGACCTCACCGCCAAGCGCGACCTCTTGGCGCTGTTCTCGCAGTCGGCGGGCGACTGGCTGGA
CGGCTGGTTCGAGAGCGAGCCGATCAAGGCGGTGCTGGGCTTCGACGGCGTGGTGGGCAACTACGCCAGCCCGTACACGC
CGGGCTCGGCCTATGTGCTGCTGCACCACGTCTTCGGCGAGGTGAACGGGAAGAAGGGCGCCTGGGGCCACGCGGTCGGC
GGCATGGGCGCGATCACCGCCGCGATGGCCGCCTGCTGCCGCGAGCGCGGGGTGGAGATCCGCACCGGGACCGGCGTCGC
CGAGGTGCTGACGCAGAAGGGCCGCGCCGTCGGCGTGGTCACCGAGGCGGGGGAGGCCCTGAAGGCGCGGCTGGTGGTCT
CGAACCTGCACCCGCAGCTGCTGTTCTCGAAGGTGGATGCGGGCGCCGTGCCGGCGGATTTCGCCGAGCGGATCGGCCGC
TACCGCTCGGGGTCGGGCACCTTCCGGATGAACGTGGCCCTGTCCGAACTGCCCAGCTTCACGGTCAAGCCGGGGGCGGG
CGACCACCTGACCGCCGGGATCATCATCGCCCCCAGCCTGGCCTACATGGACCGGGCCTACATGGACGCGCGCCGGGACG
GCTGGTCGCGCGAGCCGATCGTCGAGATGTTGATCCCCTCGACCCTGGACGAGACCCTGGCGCCGGCCGGCCGGCACGTG
GCCAGCCTGTTCTGCCAGCACGTGGCGCCGCAGTTGCCGGACGGCCGCTCGTGGGACGACCATCGCGACGAGGTCGCCGA
CCTGATGATCGCGACGGTGGACCGCCACGCGCCGGGCTTCGCCAGGTCCGTGATCGGCCGACAGGTGCTCTCGCCGCTGG
ACCTGGAGCGCACCTTCGGCCTGGTGGCCGGCGACATCATGCACGGGCGCCTGAGCCTGGATCAGCTGTTCTCGGCCCGG
CCGGTGCTGGGGGCGGGCGACTACCGCACGCCGGTCCCGGGCCTCTACCAGTGCGGTTCGGGAACCCACCCGGGCGGCGG
GGTCACCGGCGCGCCGGGCCACAACGCCGCCGCCGAGATCCTGCGCGACGTGCGCCGGCGGAAGGTCTAG

Upstream 100 bases:

>100_bases
CCAAGCGCGCCGCTGACGTGCGGTCGCCGAACGGGGGGTTGCGGCCGAGGCCCGCCCCGTCCATTGCAGCTTCGACAGCG
GTCGGACGGGGAGGCTGCGC

Downstream 100 bases:

>100_bases
CCGGCCGGCTTGCCGCGGTAGATCTCGCAGAGGGTGTCGATCACCCGGGCCGCGGCGGGGTCCTCGAGGCGGTAGTAGAT
CGTCTGGCCGTCCCGGCGGG

Product: phytoene dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 529; Mature: 528

Protein sequence:

>529_residues
MTDAIVIGAGHNGLTCAAYLAAAGLKVTVLERRGVVGGAAVTEEFHPGFRNSVASYTVSLLNPKVIRDLELARHGLRVVE
RKMSNFLPLDGDSLSVGDGRTKAEVARFSPRDAERLDAYGERLERIADVLRELVLQTPPNLVEGGLAQALPELIRSASLG
RRLSKLDLTAKRDLLALFSQSAGDWLDGWFESEPIKAVLGFDGVVGNYASPYTPGSAYVLLHHVFGEVNGKKGAWGHAVG
GMGAITAAMAACCRERGVEIRTGTGVAEVLTQKGRAVGVVTEAGEALKARLVVSNLHPQLLFSKVDAGAVPADFAERIGR
YRSGSGTFRMNVALSELPSFTVKPGAGDHLTAGIIIAPSLAYMDRAYMDARRDGWSREPIVEMLIPSTLDETLAPAGRHV
ASLFCQHVAPQLPDGRSWDDHRDEVADLMIATVDRHAPGFARSVIGRQVLSPLDLERTFGLVAGDIMHGRLSLDQLFSAR
PVLGAGDYRTPVPGLYQCGSGTHPGGGVTGAPGHNAAAEILRDVRRRKV

Sequences:

>Translated_529_residues
MTDAIVIGAGHNGLTCAAYLAAAGLKVTVLERRGVVGGAAVTEEFHPGFRNSVASYTVSLLNPKVIRDLELARHGLRVVE
RKMSNFLPLDGDSLSVGDGRTKAEVARFSPRDAERLDAYGERLERIADVLRELVLQTPPNLVEGGLAQALPELIRSASLG
RRLSKLDLTAKRDLLALFSQSAGDWLDGWFESEPIKAVLGFDGVVGNYASPYTPGSAYVLLHHVFGEVNGKKGAWGHAVG
GMGAITAAMAACCRERGVEIRTGTGVAEVLTQKGRAVGVVTEAGEALKARLVVSNLHPQLLFSKVDAGAVPADFAERIGR
YRSGSGTFRMNVALSELPSFTVKPGAGDHLTAGIIIAPSLAYMDRAYMDARRDGWSREPIVEMLIPSTLDETLAPAGRHV
ASLFCQHVAPQLPDGRSWDDHRDEVADLMIATVDRHAPGFARSVIGRQVLSPLDLERTFGLVAGDIMHGRLSLDQLFSAR
PVLGAGDYRTPVPGLYQCGSGTHPGGGVTGAPGHNAAAEILRDVRRRKV
>Mature_528_residues
TDAIVIGAGHNGLTCAAYLAAAGLKVTVLERRGVVGGAAVTEEFHPGFRNSVASYTVSLLNPKVIRDLELARHGLRVVER
KMSNFLPLDGDSLSVGDGRTKAEVARFSPRDAERLDAYGERLERIADVLRELVLQTPPNLVEGGLAQALPELIRSASLGR
RLSKLDLTAKRDLLALFSQSAGDWLDGWFESEPIKAVLGFDGVVGNYASPYTPGSAYVLLHHVFGEVNGKKGAWGHAVGG
MGAITAAMAACCRERGVEIRTGTGVAEVLTQKGRAVGVVTEAGEALKARLVVSNLHPQLLFSKVDAGAVPADFAERIGRY
RSGSGTFRMNVALSELPSFTVKPGAGDHLTAGIIIAPSLAYMDRAYMDARRDGWSREPIVEMLIPSTLDETLAPAGRHVA
SLFCQHVAPQLPDGRSWDDHRDEVADLMIATVDRHAPGFARSVIGRQVLSPLDLERTFGLVAGDIMHGRLSLDQLFSARP
VLGAGDYRTPVPGLYQCGSGTHPGGGVTGAPGHNAAAEILRDVRRRKV

Specific function: Unknown

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI229577391, Length=548, Percent_Identity=41.970802919708, Blast_Score=390, Evalue=1e-108,
Organism=Caenorhabditis elegans, GI17540238, Length=531, Percent_Identity=41.6195856873823, Blast_Score=392, Evalue=1e-109,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56420; Mature: 56289

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDAIVIGAGHNGLTCAAYLAAAGLKVTVLERRGVVGGAAVTEEFHPGFRNSVASYTVSL
CCCEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHHH
LNPKVIRDLELARHGLRVVERKMSNFLPLDGDSLSVGDGRTKAEVARFSPRDAERLDAYG
HCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHH
ERLERIADVLRELVLQTPPNLVEGGLAQALPELIRSASLGRRLSKLDLTAKRDLLALFSQ
HHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAGDWLDGWFESEPIKAVLGFDGVVGNYASPYTPGSAYVLLHHVFGEVNGKKGAWGHAVG
CCCCHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHC
GMGAITAAMAACCRERGVEIRTGTGVAEVLTQKGRAVGVVTEAGEALKARLVVSNLHPQL
CHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCHHH
LFSKVDAGAVPADFAERIGRYRSGSGTFRMNVALSELPSFTVKPGAGDHLTAGIIIAPSL
HHHHCCCCCCCHHHHHHHCCCCCCCCEEEEEEEHHHCCCEEECCCCCCCCEECEEECCHH
AYMDRAYMDARRDGWSREPIVEMLIPSTLDETLAPAGRHVASLFCQHVAPQLPDGRSWDD
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCH
HRDEVADLMIATVDRHAPGFARSVIGRQVLSPLDLERTFGLVAGDIMHGRLSLDQLFSAR
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHCCC
PVLGAGDYRTPVPGLYQCGSGTHPGGGVTGAPGHNAAAEILRDVRRRKV
CCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TDAIVIGAGHNGLTCAAYLAAAGLKVTVLERRGVVGGAAVTEEFHPGFRNSVASYTVSL
CCEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHHH
LNPKVIRDLELARHGLRVVERKMSNFLPLDGDSLSVGDGRTKAEVARFSPRDAERLDAYG
HCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHH
ERLERIADVLRELVLQTPPNLVEGGLAQALPELIRSASLGRRLSKLDLTAKRDLLALFSQ
HHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAGDWLDGWFESEPIKAVLGFDGVVGNYASPYTPGSAYVLLHHVFGEVNGKKGAWGHAVG
CCCCHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHC
GMGAITAAMAACCRERGVEIRTGTGVAEVLTQKGRAVGVVTEAGEALKARLVVSNLHPQL
CHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCHHH
LFSKVDAGAVPADFAERIGRYRSGSGTFRMNVALSELPSFTVKPGAGDHLTAGIIIAPSL
HHHHCCCCCCCHHHHHHHCCCCCCCCEEEEEEEHHHCCCEEECCCCCCCCEECEEECCHH
AYMDRAYMDARRDGWSREPIVEMLIPSTLDETLAPAGRHVASLFCQHVAPQLPDGRSWDD
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCH
HRDEVADLMIATVDRHAPGFARSVIGRQVLSPLDLERTFGLVAGDIMHGRLSLDQLFSAR
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHCCC
PVLGAGDYRTPVPGLYQCGSGTHPGGGVTGAPGHNAAAEILRDVRRRKV
CCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3453116 [H]