Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is 197103534

Identifier: 197103534

GI number: 197103534

Start: 63910

End: 65196

Strand: Direct

Name: 197103534

Synonym: PHZ_c0068

Alternate gene names: NA

Gene position: 63910-65196 (Clockwise)

Preceding gene: 197103529

Following gene: 197103535

Centisome position: 1.6

GC content: 69.15

Gene sequence:

>1287_bases
ATGGAAACGCCCGTCCCCGTCATCGCCATCCTCGGCGCCGGTCTCGGTGGGACCATCGCCGCCTACGAAATCAAGGCCGC
CGTCGGCGGCCGCGCCGAAGTCACGGTCGTCAACCAGGGCGACACGTTCCACTTCGTGCCGTCCAATCCCTGGGTGGCCG
TCCGATGGCGCAAGCGCGACGCCATCGAGGTCAGGCTGCCCGAGGTGATGAAGCGCAAGGGCATCGGCTTCACCGGCGTG
GGAGCCCGCCGGGTCCACCCGGCCGAGAACCGCATCGAGCTGAACGACGGCCAAAGCCTCGCCTACGACTATCTGGTGAT
CGCCACCGGCCCCGAGCTCGCCTTCGACGAGATCCCGGGGCTGGGGCCGCACGGCGGCTTCACCCAGTCGATCTGCCACG
TCGACCACGCCGAGCGCGCGGCGGCCGCCTTCGACGCCTTCGTGAAGGATCCGGGCCCGATCGTGGTCGGGGCCGTGCAG
GGGGCCTCGTGCTTCGGCCCGGCCTACGAGTTCGCGATGATCCTCGACACCGAGCTGCGCCGGCGGAAGCTGCGCGACCG
CGTGCCGATGACCTTCGTCACCTCCGAACCCTACATCGGGCACCTGGGCCTCGACGGCGTGGGCGACACCAAGGGCCTGC
TCGAGAGCGAGATGCGCAACCGCCACATCAAGTGGATCACCAACGCCAAGGTGGAGAAGGTGGAGGCGGGGGTCATGGAC
GTGGAGGAGGTCGCCGACGACGGCGCCGTGAAGGCCCGGCACGAGCTCCCCTTCGCCTTCTCCATGCTGCTGCCGGCGTT
CCGGGGCGTTCCGGCGATCCATGGGATCGAGGGTCTGACCAATCCCCGCGGCTTCGTGGTGGTCGACAAGAACCAGCGCA
ATCCCGCCTTCCCGAACGTCTTCGGGCTGGGCGTGGCCGTGGCCATCGCCCCGACCGGCAAGACGCCGGTGCCGGTCGGC
GTGCCGAAGACCGGCTTCATGATCGAGAGCATGGTCACCGCCATCGCCAAGAACCTGTCGGCCCTGGTGGACGGCGGGTC
GGCGAGCGCCGAGGCGACCTGGAACGCCATCTGCCTGGCCGACTTCGGGGACAGCGGGGTGGCCTTCATCGCCCAGCCGC
AGATCCCGCCGCGCAACGTCAACTGGTCGGCCGAGGGCCGCTGGGTGCACCTGGCGAAGGTGGGCTTCGAAAAGTACTTC
ATCGGCAAGGTGAAGCGCGGCGAGGCCGAGCCCTTCTACGAGAAGCTGGCGCTCGACCTCATGGGCGCCCGCAAGCTCAA
GGCCTGA

Upstream 100 bases:

>100_bases
ATATCAAGCCCGATCAAGGGCAGCTTCATTAGGCTCGCCGCGGCCGGAAAGCGTTGACTTCGCTCAAGGCGGACGGCGCG
GACTCCCGCAAGGTATGCTC

Downstream 100 bases:

>100_bases
CGCCCATGCGACAGCTCGTCTGCCACGCGTGCAACGCGGTGAACCGGATGCCGCTCGGCAAGGACCCGCTGGAGGCCAAG
TGCGGCCGCTGCGGGGACCG

Product: sulfide-quinone reductase

Products: NA

Alternate protein names: FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; SulfideQuinone Oxidoreductase; Sulfide Quinone Reductase; Pyridine Nucleotide-Disulphide Oxidoreductase; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; NAD(FAD)-Dependent Dehydrogenase; Quinone Reductase; FAD Dependent Oxidoreductase; Sulfide-Quinone Oxidoreductase

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
METPVPVIAILGAGLGGTIAAYEIKAAVGGRAEVTVVNQGDTFHFVPSNPWVAVRWRKRDAIEVRLPEVMKRKGIGFTGV
GARRVHPAENRIELNDGQSLAYDYLVIATGPELAFDEIPGLGPHGGFTQSICHVDHAERAAAAFDAFVKDPGPIVVGAVQ
GASCFGPAYEFAMILDTELRRRKLRDRVPMTFVTSEPYIGHLGLDGVGDTKGLLESEMRNRHIKWITNAKVEKVEAGVMD
VEEVADDGAVKARHELPFAFSMLLPAFRGVPAIHGIEGLTNPRGFVVVDKNQRNPAFPNVFGLGVAVAIAPTGKTPVPVG
VPKTGFMIESMVTAIAKNLSALVDGGSASAEATWNAICLADFGDSGVAFIAQPQIPPRNVNWSAEGRWVHLAKVGFEKYF
IGKVKRGEAEPFYEKLALDLMGARKLKA

Sequences:

>Translated_428_residues
METPVPVIAILGAGLGGTIAAYEIKAAVGGRAEVTVVNQGDTFHFVPSNPWVAVRWRKRDAIEVRLPEVMKRKGIGFTGV
GARRVHPAENRIELNDGQSLAYDYLVIATGPELAFDEIPGLGPHGGFTQSICHVDHAERAAAAFDAFVKDPGPIVVGAVQ
GASCFGPAYEFAMILDTELRRRKLRDRVPMTFVTSEPYIGHLGLDGVGDTKGLLESEMRNRHIKWITNAKVEKVEAGVMD
VEEVADDGAVKARHELPFAFSMLLPAFRGVPAIHGIEGLTNPRGFVVVDKNQRNPAFPNVFGLGVAVAIAPTGKTPVPVG
VPKTGFMIESMVTAIAKNLSALVDGGSASAEATWNAICLADFGDSGVAFIAQPQIPPRNVNWSAEGRWVHLAKVGFEKYF
IGKVKRGEAEPFYEKLALDLMGARKLKA
>Mature_428_residues
METPVPVIAILGAGLGGTIAAYEIKAAVGGRAEVTVVNQGDTFHFVPSNPWVAVRWRKRDAIEVRLPEVMKRKGIGFTGV
GARRVHPAENRIELNDGQSLAYDYLVIATGPELAFDEIPGLGPHGGFTQSICHVDHAERAAAAFDAFVKDPGPIVVGAVQ
GASCFGPAYEFAMILDTELRRRKLRDRVPMTFVTSEPYIGHLGLDGVGDTKGLLESEMRNRHIKWITNAKVEKVEAGVMD
VEEVADDGAVKARHELPFAFSMLLPAFRGVPAIHGIEGLTNPRGFVVVDKNQRNPAFPNVFGLGVAVAIAPTGKTPVPVG
VPKTGFMIESMVTAIAKNLSALVDGGSASAEATWNAICLADFGDSGVAFIAQPQIPPRNVNWSAEGRWVHLAKVGFEKYF
IGKVKRGEAEPFYEKLALDLMGARKLKA

Specific function: Unknown

COG id: COG0446

COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45981; Mature: 45981

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METPVPVIAILGAGLGGTIAAYEIKAAVGGRAEVTVVNQGDTFHFVPSNPWVAVRWRKRD
CCCCCCEEEEECCCCCCEEEEEEEEEECCCCEEEEEEECCCEEEECCCCCEEEEEEECCC
AIEVRLPEVMKRKGIGFTGVGARRVHPAENRIELNDGQSLAYDYLVIATGPELAFDEIPG
CEEEECHHHHHHCCCCEECCCCCEECCCCCEEEECCCCEEEEEEEEEECCCCCHHHHCCC
LGPHGGFTQSICHVDHAERAAAAFDAFVKDPGPIVVGAVQGASCFGPAYEFAMILDTELR
CCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHEEHHHHHHHH
RRKLRDRVPMTFVTSEPYIGHLGLDGVGDTKGLLESEMRNRHIKWITNAKVEKVEAGVMD
HHHHHHCCCEEEEECCCCEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHCCCCC
VEEVADDGAVKARHELPFAFSMLLPAFRGVPAIHGIEGLTNPRGFVVVDKNQRNPAFPNV
HHHHCCCCCEEEHHCCCHHHHHHHHHHCCCCCHHCCCCCCCCCEEEEEECCCCCCCCCCH
FGLGVAVAIAPTGKTPVPVGVPKTGFMIESMVTAIAKNLSALVDGGSASAEATWNAICLA
HHCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE
DFGDSGVAFIAQPQIPPRNVNWSAEGRWVHLAKVGFEKYFIGKVKRGEAEPFYEKLALDL
ECCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCHHHEECEECCCCCCHHHHHHHHHH
MGARKLKA
HCHHHCCC
>Mature Secondary Structure
METPVPVIAILGAGLGGTIAAYEIKAAVGGRAEVTVVNQGDTFHFVPSNPWVAVRWRKRD
CCCCCCEEEEECCCCCCEEEEEEEEEECCCCEEEEEEECCCEEEECCCCCEEEEEEECCC
AIEVRLPEVMKRKGIGFTGVGARRVHPAENRIELNDGQSLAYDYLVIATGPELAFDEIPG
CEEEECHHHHHHCCCCEECCCCCEECCCCCEEEECCCCEEEEEEEEEECCCCCHHHHCCC
LGPHGGFTQSICHVDHAERAAAAFDAFVKDPGPIVVGAVQGASCFGPAYEFAMILDTELR
CCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHEEHHHHHHHH
RRKLRDRVPMTFVTSEPYIGHLGLDGVGDTKGLLESEMRNRHIKWITNAKVEKVEAGVMD
HHHHHHCCCEEEEECCCCEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHCCCCC
VEEVADDGAVKARHELPFAFSMLLPAFRGVPAIHGIEGLTNPRGFVVVDKNQRNPAFPNV
HHHHCCCCCEEEHHCCCHHHHHHHHHHCCCCCHHCCCCCCCCCEEEEEECCCCCCCCCCH
FGLGVAVAIAPTGKTPVPVGVPKTGFMIESMVTAIAKNLSALVDGGSASAEATWNAICLA
HHCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE
DFGDSGVAFIAQPQIPPRNVNWSAEGRWVHLAKVGFEKYFIGKVKRGEAEPFYEKLALDL
ECCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCHHHEECEECCCCCCHHHHHHHHHH
MGARKLKA
HCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA