| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197103534
Identifier: 197103534
GI number: 197103534
Start: 63910
End: 65196
Strand: Direct
Name: 197103534
Synonym: PHZ_c0068
Alternate gene names: NA
Gene position: 63910-65196 (Clockwise)
Preceding gene: 197103529
Following gene: 197103535
Centisome position: 1.6
GC content: 69.15
Gene sequence:
>1287_bases ATGGAAACGCCCGTCCCCGTCATCGCCATCCTCGGCGCCGGTCTCGGTGGGACCATCGCCGCCTACGAAATCAAGGCCGC CGTCGGCGGCCGCGCCGAAGTCACGGTCGTCAACCAGGGCGACACGTTCCACTTCGTGCCGTCCAATCCCTGGGTGGCCG TCCGATGGCGCAAGCGCGACGCCATCGAGGTCAGGCTGCCCGAGGTGATGAAGCGCAAGGGCATCGGCTTCACCGGCGTG GGAGCCCGCCGGGTCCACCCGGCCGAGAACCGCATCGAGCTGAACGACGGCCAAAGCCTCGCCTACGACTATCTGGTGAT CGCCACCGGCCCCGAGCTCGCCTTCGACGAGATCCCGGGGCTGGGGCCGCACGGCGGCTTCACCCAGTCGATCTGCCACG TCGACCACGCCGAGCGCGCGGCGGCCGCCTTCGACGCCTTCGTGAAGGATCCGGGCCCGATCGTGGTCGGGGCCGTGCAG GGGGCCTCGTGCTTCGGCCCGGCCTACGAGTTCGCGATGATCCTCGACACCGAGCTGCGCCGGCGGAAGCTGCGCGACCG CGTGCCGATGACCTTCGTCACCTCCGAACCCTACATCGGGCACCTGGGCCTCGACGGCGTGGGCGACACCAAGGGCCTGC TCGAGAGCGAGATGCGCAACCGCCACATCAAGTGGATCACCAACGCCAAGGTGGAGAAGGTGGAGGCGGGGGTCATGGAC GTGGAGGAGGTCGCCGACGACGGCGCCGTGAAGGCCCGGCACGAGCTCCCCTTCGCCTTCTCCATGCTGCTGCCGGCGTT CCGGGGCGTTCCGGCGATCCATGGGATCGAGGGTCTGACCAATCCCCGCGGCTTCGTGGTGGTCGACAAGAACCAGCGCA ATCCCGCCTTCCCGAACGTCTTCGGGCTGGGCGTGGCCGTGGCCATCGCCCCGACCGGCAAGACGCCGGTGCCGGTCGGC GTGCCGAAGACCGGCTTCATGATCGAGAGCATGGTCACCGCCATCGCCAAGAACCTGTCGGCCCTGGTGGACGGCGGGTC GGCGAGCGCCGAGGCGACCTGGAACGCCATCTGCCTGGCCGACTTCGGGGACAGCGGGGTGGCCTTCATCGCCCAGCCGC AGATCCCGCCGCGCAACGTCAACTGGTCGGCCGAGGGCCGCTGGGTGCACCTGGCGAAGGTGGGCTTCGAAAAGTACTTC ATCGGCAAGGTGAAGCGCGGCGAGGCCGAGCCCTTCTACGAGAAGCTGGCGCTCGACCTCATGGGCGCCCGCAAGCTCAA GGCCTGA
Upstream 100 bases:
>100_bases ATATCAAGCCCGATCAAGGGCAGCTTCATTAGGCTCGCCGCGGCCGGAAAGCGTTGACTTCGCTCAAGGCGGACGGCGCG GACTCCCGCAAGGTATGCTC
Downstream 100 bases:
>100_bases CGCCCATGCGACAGCTCGTCTGCCACGCGTGCAACGCGGTGAACCGGATGCCGCTCGGCAAGGACCCGCTGGAGGCCAAG TGCGGCCGCTGCGGGGACCG
Product: sulfide-quinone reductase
Products: NA
Alternate protein names: FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; SulfideQuinone Oxidoreductase; Sulfide Quinone Reductase; Pyridine Nucleotide-Disulphide Oxidoreductase; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; NAD(FAD)-Dependent Dehydrogenase; Quinone Reductase; FAD Dependent Oxidoreductase; Sulfide-Quinone Oxidoreductase
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues METPVPVIAILGAGLGGTIAAYEIKAAVGGRAEVTVVNQGDTFHFVPSNPWVAVRWRKRDAIEVRLPEVMKRKGIGFTGV GARRVHPAENRIELNDGQSLAYDYLVIATGPELAFDEIPGLGPHGGFTQSICHVDHAERAAAAFDAFVKDPGPIVVGAVQ GASCFGPAYEFAMILDTELRRRKLRDRVPMTFVTSEPYIGHLGLDGVGDTKGLLESEMRNRHIKWITNAKVEKVEAGVMD VEEVADDGAVKARHELPFAFSMLLPAFRGVPAIHGIEGLTNPRGFVVVDKNQRNPAFPNVFGLGVAVAIAPTGKTPVPVG VPKTGFMIESMVTAIAKNLSALVDGGSASAEATWNAICLADFGDSGVAFIAQPQIPPRNVNWSAEGRWVHLAKVGFEKYF IGKVKRGEAEPFYEKLALDLMGARKLKA
Sequences:
>Translated_428_residues METPVPVIAILGAGLGGTIAAYEIKAAVGGRAEVTVVNQGDTFHFVPSNPWVAVRWRKRDAIEVRLPEVMKRKGIGFTGV GARRVHPAENRIELNDGQSLAYDYLVIATGPELAFDEIPGLGPHGGFTQSICHVDHAERAAAAFDAFVKDPGPIVVGAVQ GASCFGPAYEFAMILDTELRRRKLRDRVPMTFVTSEPYIGHLGLDGVGDTKGLLESEMRNRHIKWITNAKVEKVEAGVMD VEEVADDGAVKARHELPFAFSMLLPAFRGVPAIHGIEGLTNPRGFVVVDKNQRNPAFPNVFGLGVAVAIAPTGKTPVPVG VPKTGFMIESMVTAIAKNLSALVDGGSASAEATWNAICLADFGDSGVAFIAQPQIPPRNVNWSAEGRWVHLAKVGFEKYF IGKVKRGEAEPFYEKLALDLMGARKLKA >Mature_428_residues METPVPVIAILGAGLGGTIAAYEIKAAVGGRAEVTVVNQGDTFHFVPSNPWVAVRWRKRDAIEVRLPEVMKRKGIGFTGV GARRVHPAENRIELNDGQSLAYDYLVIATGPELAFDEIPGLGPHGGFTQSICHVDHAERAAAAFDAFVKDPGPIVVGAVQ GASCFGPAYEFAMILDTELRRRKLRDRVPMTFVTSEPYIGHLGLDGVGDTKGLLESEMRNRHIKWITNAKVEKVEAGVMD VEEVADDGAVKARHELPFAFSMLLPAFRGVPAIHGIEGLTNPRGFVVVDKNQRNPAFPNVFGLGVAVAIAPTGKTPVPVG VPKTGFMIESMVTAIAKNLSALVDGGSASAEATWNAICLADFGDSGVAFIAQPQIPPRNVNWSAEGRWVHLAKVGFEKYF IGKVKRGEAEPFYEKLALDLMGARKLKA
Specific function: Unknown
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45981; Mature: 45981
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METPVPVIAILGAGLGGTIAAYEIKAAVGGRAEVTVVNQGDTFHFVPSNPWVAVRWRKRD CCCCCCEEEEECCCCCCEEEEEEEEEECCCCEEEEEEECCCEEEECCCCCEEEEEEECCC AIEVRLPEVMKRKGIGFTGVGARRVHPAENRIELNDGQSLAYDYLVIATGPELAFDEIPG CEEEECHHHHHHCCCCEECCCCCEECCCCCEEEECCCCEEEEEEEEEECCCCCHHHHCCC LGPHGGFTQSICHVDHAERAAAAFDAFVKDPGPIVVGAVQGASCFGPAYEFAMILDTELR CCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHEEHHHHHHHH RRKLRDRVPMTFVTSEPYIGHLGLDGVGDTKGLLESEMRNRHIKWITNAKVEKVEAGVMD HHHHHHCCCEEEEECCCCEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHCCCCC VEEVADDGAVKARHELPFAFSMLLPAFRGVPAIHGIEGLTNPRGFVVVDKNQRNPAFPNV HHHHCCCCCEEEHHCCCHHHHHHHHHHCCCCCHHCCCCCCCCCEEEEEECCCCCCCCCCH FGLGVAVAIAPTGKTPVPVGVPKTGFMIESMVTAIAKNLSALVDGGSASAEATWNAICLA HHCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE DFGDSGVAFIAQPQIPPRNVNWSAEGRWVHLAKVGFEKYFIGKVKRGEAEPFYEKLALDL ECCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCHHHEECEECCCCCCHHHHHHHHHH MGARKLKA HCHHHCCC >Mature Secondary Structure METPVPVIAILGAGLGGTIAAYEIKAAVGGRAEVTVVNQGDTFHFVPSNPWVAVRWRKRD CCCCCCEEEEECCCCCCEEEEEEEEEECCCCEEEEEEECCCEEEECCCCCEEEEEEECCC AIEVRLPEVMKRKGIGFTGVGARRVHPAENRIELNDGQSLAYDYLVIATGPELAFDEIPG CEEEECHHHHHHCCCCEECCCCCEECCCCCEEEECCCCEEEEEEEEEECCCCCHHHHCCC LGPHGGFTQSICHVDHAERAAAAFDAFVKDPGPIVVGAVQGASCFGPAYEFAMILDTELR CCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHEEHHHHHHHH RRKLRDRVPMTFVTSEPYIGHLGLDGVGDTKGLLESEMRNRHIKWITNAKVEKVEAGVMD HHHHHHCCCEEEEECCCCEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHCCCCC VEEVADDGAVKARHELPFAFSMLLPAFRGVPAIHGIEGLTNPRGFVVVDKNQRNPAFPNV HHHHCCCCCEEEHHCCCHHHHHHHHHHCCCCCHHCCCCCCCCCEEEEEECCCCCCCCCCH FGLGVAVAIAPTGKTPVPVGVPKTGFMIESMVTAIAKNLSALVDGGSASAEATWNAICLA HHCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE DFGDSGVAFIAQPQIPPRNVNWSAEGRWVHLAKVGFEKYFIGKVKRGEAEPFYEKLALDL ECCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCHHHEECEECCCCCCHHHHHHHHHH MGARKLKA HCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA