Click here to switch to the map view.

The map label for this gene is ydjH [C]

Identifier: 197103505

GI number: 197103505

Start: 33054

End: 34043

Strand: Direct

Name: ydjH [C]

Synonym: PHZ_c0039

Alternate gene names: 197103505

Gene position: 33054-34043 (Clockwise)

Preceding gene: 197103504

Following gene: 197103506

Centisome position: 0.83

GC content: 70.81

Gene sequence:

>990_bases
ATGCCAGAGCTCTACGACGTCGCCGCCATCGGCAACGCCATCGTCGACGTGATCGCGCCGGCCACCGACGAGTTCATCGC
GGCGAACGGGCTCGACAAGGGCGCGATGATGCTGGTCGACGCCCAGCAAAGCCAGGCGCTGTACGCGAAGATGGCGCCCG
GCATGGAGACCTCGGGCGGCTCGGCGGCCAACACCATCGCGGGCCTCGCCAGCTTCGGCGGCAAGGGCGCCTTCATGGGC
AAGGTGGCCGACGACCAGCTCGGCGGCGTCTTCGCCCACGACATGCGGGCCATCGGCGCGCGGTTCGAGAACGCGCCTCT
CGTGGGCGGTCCGGCCACGGCGGTCTCGATGATCAACGTCACCCCCGACGGCCAGCGGACGATGTGCACCTACCTCGGCG
CCTCGGTGGAATTCACCGACGCCGACGTGGACCAGGCGGTCGTCGAGGCGGCGAAGATCGTCTACCTCGAAGGCTATCTG
TTCGACGCCGAGGCGGCGCGGCGCGCCTTCGCCAAGGCGGCGGCCCTGGCTCACGGCTCGGGCCGGATGATCGCCCTGAC
GCTGTCGGACAGCTTCGTCGTCGAGCGCCACCGCGGCGCCCTGCTGGGCTTCATCGAGAACCAGGTGGACCTGCTGTTCG
CCAACGAGGCCGAGGTCACCGCCCTGTTCGAGACCGACGATTTCGACGTCGCCGTGGCGGCCCTGCGCGAGCGCGTGACC
CTGGCCGCGGTGACCCGCAGCGAGAAGGGCTCGGTGATCCTGTCGAAGGGCGAGCGCCTGACCGTCGCGGCCGAGCCTGT
GGAAAAAGTCGTGGACACGACCGGCGCGGGCGACCAATACGCGGCCGGGTTCATGTTCGGCCTCAGCCGCGGGCGGCCGC
TGCAGCAGTGCGGCAAGCTGGCCTCGCTGGCCGCGGCCGAGGTGATCTCGCACTACGGCCCCCGGCCGCAGGTCTCGCTG
CAGGACCTGGCGGCGTCCCGGGGCTACTAG

Upstream 100 bases:

>100_bases
GCCCCAGCCGGCATCTGTTCGTCGGCCGCTAGCCGCCCCTAGCTCGTAGGGCGATTTCCCTGTAATCGGCCCCGCACGTC
CCCGGGGAAGACATCCAGCA

Downstream 100 bases:

>100_bases
GACGCAGGGATACTGACGATGAGCCGCACGGCCGAAGTCCGCCGCGACACCAAGGAGACCCAGATCCGGGTTTGGGTGGA
TCTGGACGGGACCGGCGCGT

Product: carbohydrate kinase, PfkB family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MPELYDVAAIGNAIVDVIAPATDEFIAANGLDKGAMMLVDAQQSQALYAKMAPGMETSGGSAANTIAGLASFGGKGAFMG
KVADDQLGGVFAHDMRAIGARFENAPLVGGPATAVSMINVTPDGQRTMCTYLGASVEFTDADVDQAVVEAAKIVYLEGYL
FDAEAARRAFAKAAALAHGSGRMIALTLSDSFVVERHRGALLGFIENQVDLLFANEAEVTALFETDDFDVAVAALRERVT
LAAVTRSEKGSVILSKGERLTVAAEPVEKVVDTTGAGDQYAAGFMFGLSRGRPLQQCGKLASLAAAEVISHYGPRPQVSL
QDLAASRGY

Sequences:

>Translated_329_residues
MPELYDVAAIGNAIVDVIAPATDEFIAANGLDKGAMMLVDAQQSQALYAKMAPGMETSGGSAANTIAGLASFGGKGAFMG
KVADDQLGGVFAHDMRAIGARFENAPLVGGPATAVSMINVTPDGQRTMCTYLGASVEFTDADVDQAVVEAAKIVYLEGYL
FDAEAARRAFAKAAALAHGSGRMIALTLSDSFVVERHRGALLGFIENQVDLLFANEAEVTALFETDDFDVAVAALRERVT
LAAVTRSEKGSVILSKGERLTVAAEPVEKVVDTTGAGDQYAAGFMFGLSRGRPLQQCGKLASLAAAEVISHYGPRPQVSL
QDLAASRGY
>Mature_328_residues
PELYDVAAIGNAIVDVIAPATDEFIAANGLDKGAMMLVDAQQSQALYAKMAPGMETSGGSAANTIAGLASFGGKGAFMGK
VADDQLGGVFAHDMRAIGARFENAPLVGGPATAVSMINVTPDGQRTMCTYLGASVEFTDADVDQAVVEAAKIVYLEGYLF
DAEAARRAFAKAAALAHGSGRMIALTLSDSFVVERHRGALLGFIENQVDLLFANEAEVTALFETDDFDVAVAALRERVTL
AAVTRSEKGSVILSKGERLTVAAEPVEKVVDTTGAGDQYAAGFMFGLSRGRPLQQCGKLASLAAAEVISHYGPRPQVSLQ
DLAASRGY

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Homo sapiens, GI32484975, Length=336, Percent_Identity=22.6190476190476, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI32484973, Length=336, Percent_Identity=22.6190476190476, Blast_Score=71, Evalue=1e-12,
Organism=Escherichia coli, GI87081971, Length=313, Percent_Identity=25.5591054313099, Blast_Score=65, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17541820, Length=330, Percent_Identity=24.5454545454545, Blast_Score=83, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6322565, Length=334, Percent_Identity=27.2455089820359, Blast_Score=87, Evalue=3e-18,
Organism=Drosophila melanogaster, GI21355521, Length=341, Percent_Identity=26.099706744868, Blast_Score=71, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24663633, Length=331, Percent_Identity=23.2628398791541, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI21356339, Length=331, Percent_Identity=23.2628398791541, Blast_Score=66, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: NA

Molecular weight: Translated: 34263; Mature: 34132

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPELYDVAAIGNAIVDVIAPATDEFIAANGLDKGAMMLVDAQQSQALYAKMAPGMETSGG
CCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEEECCCHHHHHHHHCCCCCCCCC
SAANTIAGLASFGGKGAFMGKVADDQLGGVFAHDMRAIGARFENAPLVGGPATAVSMINV
CHHHHHHHHHHCCCCCEEECCCCCCHHCCHHHHHHHHHHCCCCCCCCCCCCHHEEEEEEE
TPDGQRTMCTYLGASVEFTDADVDQAVVEAAKIVYLEGYLFDAEAARRAFAKAAALAHGS
CCCCCHHHHHHHCCEEEECCCHHHHHHHHHHHEEEEEEEEECHHHHHHHHHHHHHHCCCC
GRMIALTLSDSFVVERHRGALLGFIENQVDLLFANEAEVTALFETDDFDVAVAALRERVT
CCEEEEEECCCEEEEHHCCCEEEEECCCEEEEEECCCEEEEEEECCCCHHHHHHHHHHHE
LAAVTRSEKGSVILSKGERLTVAAEPVEKVVDTTGAGDQYAAGFMFGLSRGRPLQQCGKL
EEEEECCCCCCEEEECCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHH
ASLAAAEVISHYGPRPQVSLQDLAASRGY
HHHHHHHHHHHCCCCCCCCHHHHHHCCCC
>Mature Secondary Structure 
PELYDVAAIGNAIVDVIAPATDEFIAANGLDKGAMMLVDAQQSQALYAKMAPGMETSGG
CCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEEECCCHHHHHHHHCCCCCCCCC
SAANTIAGLASFGGKGAFMGKVADDQLGGVFAHDMRAIGARFENAPLVGGPATAVSMINV
CHHHHHHHHHHCCCCCEEECCCCCCHHCCHHHHHHHHHHCCCCCCCCCCCCHHEEEEEEE
TPDGQRTMCTYLGASVEFTDADVDQAVVEAAKIVYLEGYLFDAEAARRAFAKAAALAHGS
CCCCCHHHHHHHCCEEEECCCHHHHHHHHHHHEEEEEEEEECHHHHHHHHHHHHHHCCCC
GRMIALTLSDSFVVERHRGALLGFIENQVDLLFANEAEVTALFETDDFDVAVAALRERVT
CCEEEEEECCCEEEEHHCCCEEEEECCCEEEEEECCCEEEEEEECCCCHHHHHHHHHHHE
LAAVTRSEKGSVILSKGERLTVAAEPVEKVVDTTGAGDQYAAGFMFGLSRGRPLQQCGKL
EEEEECCCCCCEEEECCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHH
ASLAAAEVISHYGPRPQVSLQDLAASRGY
HHHHHHHHHHHCCCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]