| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is hisB
Identifier: 197103506
GI number: 197103506
Start: 34062
End: 34652
Strand: Direct
Name: hisB
Synonym: PHZ_c0040
Alternate gene names: 197103506
Gene position: 34062-34652 (Clockwise)
Preceding gene: 197103505
Following gene: 197103507
Centisome position: 0.85
GC content: 67.01
Gene sequence:
>591_bases ATGAGCCGCACGGCCGAAGTCCGCCGCGACACCAAGGAGACCCAGATCCGGGTTTGGGTGGATCTGGACGGGACCGGCGC GTCCGAAGTCTCGACGGGCGTCGGCTTCTTCGACCACATGCTGGACAGCTTCGCCCGCCACGGCGGCTTCGACCTGAAGG TCGAGACGAAGGGCGACCTGCACATCGACATGCACCACACCGTCGAGGACACCGGCATCGTCCTCGGCCAGGCGATCAAG GAGTCCCTGGACGGGTTCAAGGGGATCCGCCGGTTCGGCCACGCCTACATCCCGATGGACGAGACCCTGTCGCGCTGCGC CATCGACCTGTCGAACCGGCCCTACCTGATCTGGAAGACGGACTTCCGCACGCCCAAGGTCGGCGACATGGACACCGAGC TCTTCAAGGAGTTCCACCACGCCTTCGCGATGAACGCGGGCGCGTGCGTGCACCTGGAGTGCCTCTACGGGACCAACTCG CACCACATCGCCGAGAGCGGGTTCAAGGCGCTGGCCCGGGCCCTGCGGCAGGCGGTCGAGCTCGATCCCAAGACCCACGG CCACGCCCCCTCCACCAAGGGCGTCCTCTAG
Upstream 100 bases:
>100_bases GGCCGCGGCCGAGGTGATCTCGCACTACGGCCCCCGGCCGCAGGTCTCGCTGCAGGACCTGGCGGCGTCCCGGGGCTACT AGGACGCAGGGATACTGACG
Downstream 100 bases:
>100_bases GATCATCGCGATGCAGAGGGTGGCCCTGATCGACTACGGGTCGGGCAACCTGCGCTCGGCCGAAAAGGCCCTCGTCCGCG CCGCGGACGGGCGGGCGGAG
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MSRTAEVRRDTKETQIRVWVDLDGTGASEVSTGVGFFDHMLDSFARHGGFDLKVETKGDLHIDMHHTVEDTGIVLGQAIK ESLDGFKGIRRFGHAYIPMDETLSRCAIDLSNRPYLIWKTDFRTPKVGDMDTELFKEFHHAFAMNAGACVHLECLYGTNS HHIAESGFKALARALRQAVELDPKTHGHAPSTKGVL
Sequences:
>Translated_196_residues MSRTAEVRRDTKETQIRVWVDLDGTGASEVSTGVGFFDHMLDSFARHGGFDLKVETKGDLHIDMHHTVEDTGIVLGQAIK ESLDGFKGIRRFGHAYIPMDETLSRCAIDLSNRPYLIWKTDFRTPKVGDMDTELFKEFHHAFAMNAGACVHLECLYGTNS HHIAESGFKALARALRQAVELDPKTHGHAPSTKGVL >Mature_195_residues SRTAEVRRDTKETQIRVWVDLDGTGASEVSTGVGFFDHMLDSFARHGGFDLKVETKGDLHIDMHHTVEDTGIVLGQAIKE SLDGFKGIRRFGHAYIPMDETLSRCAIDLSNRPYLIWKTDFRTPKVGDMDTELFKEFHHAFAMNAGACVHLECLYGTNSH HIAESGFKALARALRQAVELDPKTHGHAPSTKGVL
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family
Homologues:
Organism=Escherichia coli, GI87082027, Length=194, Percent_Identity=52.0618556701031, Blast_Score=193, Evalue=8e-51, Organism=Saccharomyces cerevisiae, GI6324776, Length=218, Percent_Identity=42.6605504587156, Blast_Score=178, Evalue=5e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS7_PHEZH (B4RBJ4)
Other databases:
- EMBL: CP000747 - RefSeq: YP_002128883.1 - ProteinModelPortal: B4RBJ4 - GeneID: 6789527 - GenomeReviews: CP000747_GR - KEGG: pzu:PHZ_c0040 - HOGENOM: HBG289010 - OMA: TLHVETL - ProtClustDB: PRK00951 - GO: GO:0005737 - HAMAP: MF_00076 - InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568
Pfam domain/function: PF00475 IGPD; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: =4.2.1.19
Molecular weight: Translated: 21836; Mature: 21705
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: PS00954 IGP_DEHYDRATASE_1; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTAEVRRDTKETQIRVWVDLDGTGASEVSTGVGFFDHMLDSFARHGGFDLKVETKGDL CCCCHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCE HIDMHHTVEDTGIVLGQAIKESLDGFKGIRRFGHAYIPMDETLSRCAIDLSNRPYLIWKT EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEECCCCCEEEEEC DFRTPKVGDMDTELFKEFHHAFAMNAGACVHLECLYGTNSHHIAESGFKALARALRQAVE CCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH LDPKTHGHAPSTKGVL CCCCCCCCCCCCCCCC >Mature Secondary Structure SRTAEVRRDTKETQIRVWVDLDGTGASEVSTGVGFFDHMLDSFARHGGFDLKVETKGDL CCCHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCE HIDMHHTVEDTGIVLGQAIKESLDGFKGIRRFGHAYIPMDETLSRCAIDLSNRPYLIWKT EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEECCCCCEEEEEC DFRTPKVGDMDTELFKEFHHAFAMNAGACVHLECLYGTNSHHIAESGFKALARALRQAVE CCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH LDPKTHGHAPSTKGVL CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA