| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197103473
Identifier: 197103473
GI number: 197103473
Start: 4407
End: 5024
Strand: Direct
Name: 197103473
Synonym: PHZ_c0007
Alternate gene names: NA
Gene position: 4407-5024 (Clockwise)
Preceding gene: 197103471
Following gene: 197103474
Centisome position: 0.11
GC content: 72.01
Gene sequence:
>618_bases TTGCAAGTCCTCGAGCTGATCATCTTCGCCGGCCTCGCGGCCATCGTGCTCTACCAGCTCTATTCGGTGCTGGGCCGGCG CGTCGGGCGCCAGCCGGAGGACCAGGCCGCCGCCGAGCCGGCGCAGGGCTCCGTACGCGCCGTCGACCGGATGGCCGAAC CGGCCGACGACGGCGTGGCGCTGACGGGCCTGGCCGCGGTGAAGGCGCTGGACCCCAGCTTCGACGTCGGCCACTTCCTG GGCGGCGCCAAGCAGGCCTACGAGATGATCGTGCGGGCCTTCGCCGACGGCGACCGGGCCACGCTGAAGAACCTGCTCGC GCCGCAGGTGCTGGCCTCGTTCGAGGCGGCCATCGACCAGCGCGAGGCCGAGGGCCGCACCGAGAGCGTCGAGTTCTTCC ACCCGCCCCGCGCCGACCTCGAGAAGGCCGACGTCACGGGCGCCGACCTCGGCCGGGTGACCGTCCGGTTCCTGGCCGAA TTCCGCAGCCGCACCAAGGGCCCCGAGGGCGAGGCCGTGGACGACCGCCGCACCGCCGAGCTGTGGACGTTCGAACGCAA TCTTAAGAGCCGTGACCCCAACTGGATGCTGGTCCACGTCGACGCCGCGGAGGCGTAA
Upstream 100 bases:
>100_bases GGCGCCTCAGGGGATGCAACGCCGCCCCTGACGGCGGCGTTCCGGCAGCCTATATTGAGGCGTTGGACGGATCCCCCACG TCCCTAGCCAAGGCAGGAAG
Downstream 100 bases:
>100_bases GCGCCTTGAACATCGGTCCGGTGCGGGCGGCCCTGGCCGCCCTGGTCCTTACCGCCTGCGCCACGCCCACGGTGGTCCCG CCCGTCGGACCGGCCGTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: Translocase Transmembrane Protein; Mitochondrial Import Inner Membrane Translocase; Tim44 Domain-Containing Protein; Mitochondrial Import Inner Membrane Translocase Subunit Tim; Tim44 Family Protein; Tim44-Like Domain Family; Import Inner Membrane Translocase; Import Inner Membrane Translocase Subunit; Tim44-Like Domain-Containing Protein; Membrane Associated Transporter Protein; Tim44-Like Domain Superfamily
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MQVLELIIFAGLAAIVLYQLYSVLGRRVGRQPEDQAAAEPAQGSVRAVDRMAEPADDGVALTGLAAVKALDPSFDVGHFL GGAKQAYEMIVRAFADGDRATLKNLLAPQVLASFEAAIDQREAEGRTESVEFFHPPRADLEKADVTGADLGRVTVRFLAE FRSRTKGPEGEAVDDRRTAELWTFERNLKSRDPNWMLVHVDAAEA
Sequences:
>Translated_205_residues MQVLELIIFAGLAAIVLYQLYSVLGRRVGRQPEDQAAAEPAQGSVRAVDRMAEPADDGVALTGLAAVKALDPSFDVGHFL GGAKQAYEMIVRAFADGDRATLKNLLAPQVLASFEAAIDQREAEGRTESVEFFHPPRADLEKADVTGADLGRVTVRFLAE FRSRTKGPEGEAVDDRRTAELWTFERNLKSRDPNWMLVHVDAAEA >Mature_205_residues MQVLELIIFAGLAAIVLYQLYSVLGRRVGRQPEDQAAAEPAQGSVRAVDRMAEPADDGVALTGLAAVKALDPSFDVGHFL GGAKQAYEMIVRAFADGDRATLKNLLAPQVLASFEAAIDQREAEGRTESVEFFHPPRADLEKADVTGADLGRVTVRFLAE FRSRTKGPEGEAVDDRRTAELWTFERNLKSRDPNWMLVHVDAAEA
Specific function: Unknown
COG id: COG4395
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22379; Mature: 22379
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVLELIIFAGLAAIVLYQLYSVLGRRVGRQPEDQAAAEPAQGSVRAVDRMAEPADDGVA CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHCCCCCCCCH LTGLAAVKALDPSFDVGHFLGGAKQAYEMIVRAFADGDRATLKNLLAPQVLASFEAAIDQ HHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH REAEGRTESVEFFHPPRADLEKADVTGADLGRVTVRFLAEFRSRTKGPEGEAVDDRRTAE HHHCCCCCCEEEECCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH LWTFERNLKSRDPNWMLVHVDAAEA HHHHHHHHHCCCCCEEEEEECCCCC >Mature Secondary Structure MQVLELIIFAGLAAIVLYQLYSVLGRRVGRQPEDQAAAEPAQGSVRAVDRMAEPADDGVA CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHCCCCCCCCH LTGLAAVKALDPSFDVGHFLGGAKQAYEMIVRAFADGDRATLKNLLAPQVLASFEAAIDQ HHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH REAEGRTESVEFFHPPRADLEKADVTGADLGRVTVRFLAEFRSRTKGPEGEAVDDRRTAE HHHCCCCCCEEEECCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH LWTFERNLKSRDPNWMLVHVDAAEA HHHHHHHHHCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA