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The map label for this gene is cas4

Identifier: 195977693

GI number: 195977693

Start: 579234

End: 579905

Strand: Direct

Name: cas4

Synonym: Sez_0552

Alternate gene names: NA

Gene position: 579234-579905 (Clockwise)

Preceding gene: 195977692

Following gene: 195977694

Centisome position: 28.62

GC content: 43.01

Gene sequence:

>672_bases
ATGGTTTATGTAGAAGATGACTACCTGATGTTATCAGGTATCCAGCATTTTCAATTTTGTAAGCGTCAGTGGGCATTGAT
TCACATTGACCAGCAGTGGGCGGATAATGAAGCAACGGTTCATGGTCAGATTCTGCATACAAGGGCTGATAATCCTTATA
TTAGAGAAAAACGAAAGGACTTCTTTTTGTCGCGTGCGATGCATATTTCTTCTGCTCGTTTGGGCTTGTATGGGGTTATG
GACGTGGTTGAGTTCTATAAGGATGATTCAGGTGTAACGGTGAAAGGCAAGCGCGGAAGATGGTTGCCTAGAGTGGTTGA
ATACAAGCGAGGCAAGCCCAAAAAGGATAGGCGTGATATTGTGCAATTAGTTGCCCAAACCATGTGCTTGGAGGAGACCT
TGAATTGTCAAATCGCAGAAGGTAGCCTTTATTATCATAGTGTCAATAAGAAGGTCCAAATAGCTATCACAGATGAGTTG
CGAAGGGAGGTTCAGGAGCTAGCCAATCAGATGCATAGGTTCTATGGGGCTAAGGAGCTTCCTAAGGCAGAATATTTTAA
GAATTGTCAGCTATGTTCTTTAGTAGAGGTGTGTAAGCCGCGTATCAGCAAGAAGGTGCGAAATGTTGATCGTTATATAG
CAGCTGCTATGGTTAGTGAGGAAATCATATGA

Upstream 100 bases:

>100_bases
AAGGATAGCTACGAGGCTTATGGTATTCATTTAGATGAGGAAAACTTAGCAGCCTACCAAGCAAAAGGATTAACGGTTGA
GGTCCTAGAAGGATTGTAGA

Downstream 100 bases:

>100_bases
AAAAGCTTTTAAACACCCTCTACCTGACTCAGGAAGATTATTATATCACCAAAGAGGGAGACAATATTGTTATCAAACAA
GATGGGAAAACGGTATCGCG

Product: CRISPR-associated RecB family exonuclease Cas4b

Products: NA

Alternate protein names: CRISPR-Associated Exonuclease Cas4 Family Protein; RecB Family Exonuclease; CRISPR-Associated Exonuclease Cas4 Family; Endonuclease; Exonuclease RecB Family Protein; CRISPR-Associated Cas1 Family Protein; CRISPR-Associated Protein; Protein Be Involved In DNA Repair; Cas4 Family CRISPR-Associated Protein; Exonuclease N; PE-PGRS Family Protein; CRISPR-Associated Cas1/Cas4 Family Protein; CRISPR-Associated RecB Family Exonuclease Cas4b; RecB Family Exonuclease Protein

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MVYVEDDYLMLSGIQHFQFCKRQWALIHIDQQWADNEATVHGQILHTRADNPYIREKRKDFFLSRAMHISSARLGLYGVM
DVVEFYKDDSGVTVKGKRGRWLPRVVEYKRGKPKKDRRDIVQLVAQTMCLEETLNCQIAEGSLYYHSVNKKVQIAITDEL
RREVQELANQMHRFYGAKELPKAEYFKNCQLCSLVEVCKPRISKKVRNVDRYIAAAMVSEEII

Sequences:

>Translated_223_residues
MVYVEDDYLMLSGIQHFQFCKRQWALIHIDQQWADNEATVHGQILHTRADNPYIREKRKDFFLSRAMHISSARLGLYGVM
DVVEFYKDDSGVTVKGKRGRWLPRVVEYKRGKPKKDRRDIVQLVAQTMCLEETLNCQIAEGSLYYHSVNKKVQIAITDEL
RREVQELANQMHRFYGAKELPKAEYFKNCQLCSLVEVCKPRISKKVRNVDRYIAAAMVSEEII
>Mature_223_residues
MVYVEDDYLMLSGIQHFQFCKRQWALIHIDQQWADNEATVHGQILHTRADNPYIREKRKDFFLSRAMHISSARLGLYGVM
DVVEFYKDDSGVTVKGKRGRWLPRVVEYKRGKPKKDRRDIVQLVAQTMCLEETLNCQIAEGSLYYHSVNKKVQIAITDEL
RREVQELANQMHRFYGAKELPKAEYFKNCQLCSLVEVCKPRISKKVRNVDRYIAAAMVSEEII

Specific function: Unknown

COG id: COG1468

COG function: function code L; RecB family exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26135; Mature: 26135

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYVEDDYLMLSGIQHFQFCKRQWALIHIDQQWADNEATVHGQILHTRADNPYIREKRKD
CEEECCCHHEEHHHHHHHHHHHCCEEEEEECCCCCCCCEEEEEEEEECCCCCHHHHHHHH
FFLSRAMHISSARLGLYGVMDVVEFYKDDSGVTVKGKRGRWLPRVVEYKRGKPKKDRRDI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCCCHHHHHH
VQLVAQTMCLEETLNCQIAEGSLYYHSVNKKVQIAITDELRREVQELANQMHRFYGAKEL
HHHHHHHHHHHHHCCCEEECCEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCC
PKAEYFKNCQLCSLVEVCKPRISKKVRNVDRYIAAAMVSEEII
CHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVYVEDDYLMLSGIQHFQFCKRQWALIHIDQQWADNEATVHGQILHTRADNPYIREKRKD
CEEECCCHHEEHHHHHHHHHHHCCEEEEEECCCCCCCCEEEEEEEEECCCCCHHHHHHHH
FFLSRAMHISSARLGLYGVMDVVEFYKDDSGVTVKGKRGRWLPRVVEYKRGKPKKDRRDI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCCCHHHHHH
VQLVAQTMCLEETLNCQIAEGSLYYHSVNKKVQIAITDELRREVQELANQMHRFYGAKEL
HHHHHHHHHHHHHCCCEEECCEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCC
PKAEYFKNCQLCSLVEVCKPRISKKVRNVDRYIAAAMVSEEII
CHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA