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The map label for this gene is cas5

Identifier: 195977690

GI number: 195977690

Start: 575781

End: 576500

Strand: Direct

Name: cas5

Synonym: Sez_0549

Alternate gene names: NA

Gene position: 575781-576500 (Clockwise)

Preceding gene: 195977689

Following gene: 195977691

Centisome position: 28.45

GC content: 43.33

Gene sequence:

>720_bases
ATGCGTGTCCGAGGCGATATCGCCTTATTTACGAACCCTGCAACCAAAGGCTCTAGTGAGCGTTCTAGCTACCCTGTCCC
GACGCGACAGGCCTTGCAGGGCATTGTTGATGCAGTCTACCATAAACCGACTATCACTAATGTGGTCACAGAGGTCAAGG
TAATCAATCAGATTCAAACAGAGCTGCATGGTACTAGAGCCCTGTTAAAGGATTATGGCGCAGATTTGAGCTATGTATCT
TATCTTAGTGATGTGGAATATCTAATAAAATATCACTTTGTCTGGAATGAGAATAGACCTGATTTGGTTAAGGATCGCTT
GCCGAATAAGCATGAAGCGATTATGGAGCGTTCACTGCGTAAGGGTGGCAGACGTGATGTCTTTTTAGGTACTCGTGAGT
GCCTAGGCTTGGTTGAAGCGATTAGTCAGGAGGAATATGAGACAGCACAAATAGCTTCAGAGCATGCTAATCAAGAGATT
GATTTGGGAATTATGTTTCATTCCTTTGCTTATCCAACAGACAGAAAAGAGCCTTTACGTTCCTACTTTACACGAACAGT
AATGACTAATGGAACGATTCACTTTAAAGAGCAGGCTGAGTGTGAAATTGTGAATACCTTATCAAGTTATACTTTTAAGC
CAGCAGGACCGATCAAACCGGTTGAGGAGGAGTTTGAAGGGTATCAGCTAGACACAATAAGAGAAACAGGAGGGCAGTAA

Upstream 100 bases:

>100_bases
ACAGAAAAAACAATTGACAATTGCAACTGATATTAGTATAGTAAATGTAATTATTATAGCGAAGGAGGAATGGCCATTGT
ACAGATCTCGACATTTTTAC

Downstream 100 bases:

>100_bases
TGGATTTTTTCGCCTCGCTTTTGCGTGCCTATGAGCATGCTGAGGATATTGGATTGGTTGATAATCAAGAGCAGTCTGGA
ACAATCCTGTTACCGATTTA

Product: CRISPR-associated protein Cas5, Dvulg subtype

Products: NA

Alternate protein names: CRISPR-Associated Dvulg Subtype; CRISPR-Associated Family; CRISPR-Associated Cas5d Family Protein; Cytoplasmic Protein; CRISPR-Associated Protein; Cas5 Family CRISPR-Associated Protein; Crispr-Associated Protein; CRISPR-Associated Csd1 Family Protein

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MRVRGDIALFTNPATKGSSERSSYPVPTRQALQGIVDAVYHKPTITNVVTEVKVINQIQTELHGTRALLKDYGADLSYVS
YLSDVEYLIKYHFVWNENRPDLVKDRLPNKHEAIMERSLRKGGRRDVFLGTRECLGLVEAISQEEYETAQIASEHANQEI
DLGIMFHSFAYPTDRKEPLRSYFTRTVMTNGTIHFKEQAECEIVNTLSSYTFKPAGPIKPVEEEFEGYQLDTIRETGGQ

Sequences:

>Translated_239_residues
MRVRGDIALFTNPATKGSSERSSYPVPTRQALQGIVDAVYHKPTITNVVTEVKVINQIQTELHGTRALLKDYGADLSYVS
YLSDVEYLIKYHFVWNENRPDLVKDRLPNKHEAIMERSLRKGGRRDVFLGTRECLGLVEAISQEEYETAQIASEHANQEI
DLGIMFHSFAYPTDRKEPLRSYFTRTVMTNGTIHFKEQAECEIVNTLSSYTFKPAGPIKPVEEEFEGYQLDTIRETGGQ
>Mature_239_residues
MRVRGDIALFTNPATKGSSERSSYPVPTRQALQGIVDAVYHKPTITNVVTEVKVINQIQTELHGTRALLKDYGADLSYVS
YLSDVEYLIKYHFVWNENRPDLVKDRLPNKHEAIMERSLRKGGRRDVFLGTRECLGLVEAISQEEYETAQIASEHANQEI
DLGIMFHSFAYPTDRKEPLRSYFTRTVMTNGTIHFKEQAECEIVNTLSSYTFKPAGPIKPVEEEFEGYQLDTIRETGGQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27238; Mature: 27238

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVRGDIALFTNPATKGSSERSSYPVPTRQALQGIVDAVYHKPTITNVVTEVKVINQIQT
CCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
ELHGTRALLKDYGADLSYVSYLSDVEYLIKYHFVWNENRPDLVKDRLPNKHEAIMERSLR
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHCCCHHHHHHHHHHH
KGGRRDVFLGTRECLGLVEAISQEEYETAQIASEHANQEIDLGIMFHSFAYPTDRKEPLR
CCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCCHHHHH
SYFTRTVMTNGTIHFKEQAECEIVNTLSSYTFKPAGPIKPVEEEFEGYQLDTIRETGGQ
HHHHHHHHCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHCCCEEEHHHCCCCC
>Mature Secondary Structure
MRVRGDIALFTNPATKGSSERSSYPVPTRQALQGIVDAVYHKPTITNVVTEVKVINQIQT
CCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
ELHGTRALLKDYGADLSYVSYLSDVEYLIKYHFVWNENRPDLVKDRLPNKHEAIMERSLR
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHCCCHHHHHHHHHHH
KGGRRDVFLGTRECLGLVEAISQEEYETAQIASEHANQEIDLGIMFHSFAYPTDRKEPLR
CCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCCHHHHH
SYFTRTVMTNGTIHFKEQAECEIVNTLSSYTFKPAGPIKPVEEEFEGYQLDTIRETGGQ
HHHHHHHHCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHCCCEEEHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA