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The map label for this gene is yurN [H]

Identifier: 195977394

GI number: 195977394

Start: 269559

End: 270425

Strand: Direct

Name: yurN [H]

Synonym: Sez_0247

Alternate gene names: 195977394

Gene position: 269559-270425 (Clockwise)

Preceding gene: 195977393

Following gene: 195977395

Centisome position: 13.32

GC content: 39.91

Gene sequence:

>867_bases
ATGAGAGAGACACTCGTTTCATATGCTTTTTTGGCCCCGGTCTTGGTTTTCTTTGTGGTATTTGTTTTAGTACCAATGAT
TATGGGCTTTGTTACTAGCTTTTTTAATTATACGATGACAGACTTTACCTTTGTCGGGCTTGATAACTATGTGAGAATGT
TTCAGGATCCTGTGTTTATAAAGTCTTTGATTAATACCCTTATTATTGTAGTTGGTTCAGTACCAATTGTTGTTTTCTTT
TCATTATTTGTAGCGACAAAAACCTACAATAAGCATGTGATTTCGCGTTCTTTTTATCGGGCGGTTTTCTTCCTGCCTGT
TGTAACAGGTAGTGTTGCGGTAACAGTTGTTTGGAAATGGATCTATGATCCTATGTCAGGTATTTTGAACTATGTGCTAA
AGTATGGGCATGTTATTGAGCAAAATATTAGCTGGCTTGGGGACAAGCATTGGGCTTTGCTGGCTATTATTGTGATTTTA
TTAACAACCTCTGTTGGGCAGCCGATTATCCTATACATTGCTGCAATGGGAAATATTGACAATTCCTTGGTAGAGGCGGC
TCGTGTTGACGGTGCGACTGAGTTGCAGGTCTTTTGGAAGATTAAGTGGCCGAGTTTATTGCCAACCACTCTCTATATCA
CTGTCATCACAACGATCAATTCTTTCCAATGCTTTGCCTTGATTCAGCTGTTGACCTCTGGTGGTCCCAACTATTCAACC
AGCACTCTGATGTACTATCTTTACGAAAAAGCCTTCAAGCTATCGGAATACGGCTATGCTAACACGATGGGGGTTTTCTT
GGCTATCTTGATTGCACTGATCAGCTTTGCCCAGTTCAAATTCTTGGGTAATGATGTGGAATATTAA

Upstream 100 bases:

>100_bases
TTTCAATGCACATGTCCAATGGTCACTGGTAAGGAGCCTTTCCTTTTAGGAAGATTAATAGAAAAAGAGGTATCTTTGAG
TGAACGTCAATAAGTTAAAA

Downstream 100 bases:

>100_bases
AAGGAGCTTGACATGAAGAAAAAGAAATTAACAGCATCAGATATCCTAACAACAGCCATTTTGTGTTTATTAACAATATT
ATTTATTTTCCCCTTTTATT

Product: ABC transporter, N-acetylneuraminate transport system permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MRETLVSYAFLAPVLVFFVVFVLVPMIMGFVTSFFNYTMTDFTFVGLDNYVRMFQDPVFIKSLINTLIIVVGSVPIVVFF
SLFVATKTYNKHVISRSFYRAVFFLPVVTGSVAVTVVWKWIYDPMSGILNYVLKYGHVIEQNISWLGDKHWALLAIIVIL
LTTSVGQPIILYIAAMGNIDNSLVEAARVDGATELQVFWKIKWPSLLPTTLYITVITTINSFQCFALIQLLTSGGPNYST
STLMYYLYEKAFKLSEYGYANTMGVFLAILIALISFAQFKFLGNDVEY

Sequences:

>Translated_288_residues
MRETLVSYAFLAPVLVFFVVFVLVPMIMGFVTSFFNYTMTDFTFVGLDNYVRMFQDPVFIKSLINTLIIVVGSVPIVVFF
SLFVATKTYNKHVISRSFYRAVFFLPVVTGSVAVTVVWKWIYDPMSGILNYVLKYGHVIEQNISWLGDKHWALLAIIVIL
LTTSVGQPIILYIAAMGNIDNSLVEAARVDGATELQVFWKIKWPSLLPTTLYITVITTINSFQCFALIQLLTSGGPNYST
STLMYYLYEKAFKLSEYGYANTMGVFLAILIALISFAQFKFLGNDVEY
>Mature_288_residues
MRETLVSYAFLAPVLVFFVVFVLVPMIMGFVTSFFNYTMTDFTFVGLDNYVRMFQDPVFIKSLINTLIIVVGSVPIVVFF
SLFVATKTYNKHVISRSFYRAVFFLPVVTGSVAVTVVWKWIYDPMSGILNYVLKYGHVIEQNISWLGDKHWALLAIIVIL
LTTSVGQPIILYIAAMGNIDNSLVEAARVDGATELQVFWKIKWPSLLPTTLYITVITTINSFQCFALIQLLTSGGPNYST
STLMYYLYEKAFKLSEYGYANTMGVFLAILIALISFAQFKFLGNDVEY

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=296, Percent_Identity=25.3378378378378, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1787570, Length=255, Percent_Identity=29.4117647058824, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1790465, Length=266, Percent_Identity=24.812030075188, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32584; Mature: 32584

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRETLVSYAFLAPVLVFFVVFVLVPMIMGFVTSFFNYTMTDFTFVGLDNYVRMFQDPVFI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHCHHHH
KSLINTLIIVVGSVPIVVFFSLFVATKTYNKHVISRSFYRAVFFLPVVTGSVAVTVVWKW
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
IYDPMSGILNYVLKYGHVIEQNISWLGDKHWALLAIIVILLTTSVGQPIILYIAAMGNID
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHEEHHCCCC
NSLVEAARVDGATELQVFWKIKWPSLLPTTLYITVITTINSFQCFALIQLLTSGGPNYST
HHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCH
STLMYYLYEKAFKLSEYGYANTMGVFLAILIALISFAQFKFLGNDVEY
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRETLVSYAFLAPVLVFFVVFVLVPMIMGFVTSFFNYTMTDFTFVGLDNYVRMFQDPVFI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHCHHHH
KSLINTLIIVVGSVPIVVFFSLFVATKTYNKHVISRSFYRAVFFLPVVTGSVAVTVVWKW
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
IYDPMSGILNYVLKYGHVIEQNISWLGDKHWALLAIIVILLTTSVGQPIILYIAAMGNID
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHEEHHCCCC
NSLVEAARVDGATELQVFWKIKWPSLLPTTLYITVITTINSFQCFALIQLLTSGGPNYST
HHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCH
STLMYYLYEKAFKLSEYGYANTMGVFLAILIALISFAQFKFLGNDVEY
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]