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The map label for this gene is yesO [H]

Identifier: 195977393

GI number: 195977393

Start: 268124

End: 269437

Strand: Direct

Name: yesO [H]

Synonym: Sez_0246

Alternate gene names: 195977393

Gene position: 268124-269437 (Clockwise)

Preceding gene: 195977392

Following gene: 195977394

Centisome position: 13.25

GC content: 42.31

Gene sequence:

>1314_bases
ATGAAAATGAAGAAATTAGCTTCATTTGTGATGCTTGGAGCATCTGTTTTAGGGTTAGCAGCCTGTGGCAGTAGCAGCAA
GGAGGCTGACAAATCAGATTCAGCTGCTAAGACAGAGATCACCTGGTGGGCCTTTCCAACCTTCACTCAAGAAAAGGCTG
ATGATAGCGTAGGAACCTACGAAAAGAAAATTATTGCAGCCTTTGAAAAGGCCAATCCAGACATTAAGGTCAAGCTAGAA
ACCATTGATTTCACCTCTGGTCCAGAAAAAATCACTACTGCGATTGAGGCGGGTACAGCACCAGATGTGCTCTTTGATGC
TCCAGGTCGTATCATTGAGTATGGTAAAAACGGTAAATTAGCTGACTTAAATGATCTCTTCACTGATGATTTTATCAAGG
ACGTCAACAACGATAACATTATCCAAGCCTCTAAAGCAGGAGATACAGCTTATATGTATCCTATCAGCTCAGCGCCGTTT
TATATGGCCTTAAATAAAAAAATGCTCAAGGACGCTGGTGTTCTTGACCTTGTCAAAGAGGGCTGGACAACCGATGATTT
TGAAAAGGTCTTAAAAGCCTTAAAGGATAAGGGCTACAATCCTGGGTCATTCTTTGCCAATGGTCAGGGTGGTGACCAAG
GTCCTCGTGCCTTCTTTGCCAACCTCTATAGCAGCCGCATCACAAATGACGATGTGACTAAGTACACCACTGATGATGCT
AATTCTGTCAAGAGCATGGAAAAAATCGCAAGCTGGATTAAGGATGGTCTTCTAATGAATGGCTCTCAATATGATGGCTC
AGCTGATATTCAAAACTTTGCTAATGGTCAAACCTCATTTACAATCCTATGGTCACCAGCGCAAGCAGGAACCCAGGCTA
AATTGTTGGAGGCAAGTAAGGTTGATTATGTTGAGGTTCCATTCCCTTCAGAGGACGGCAAGCCTGAATTAGAATACCTA
GTGAACGGCTTTGCAGTGTTCAACAACAAGGACGACAAAAAGATTGAGGCTTCTAAGAAATTTATCCAGTTTATCGCAGA
TGATAAAGAATGGGGACCAAAAAATGTTGTCCGTACAGGCGCTTTCCCTGTAAGAAGCTCTTATGGTAACCTCTATGATG
ATAAACGCATGGCAATGGTTTCTAAGTGGACACAATACTATTCACCATACTACAACACTATTGATGGCTTTGCTGAGATG
AGAACACTATGGTTCCCAATGGTTCAGGCAGTATCAAATGGAGATGAAAAGCCTGCAGCAGCCCTAAAAGCATTCACTGA
AAAAGCAAATAAAACCATCGAAAAAGCACAATAG

Upstream 100 bases:

>100_bases
TGGTGCTATTACCAGACCAAAGGAAATTGCAGAGCGCTTTGTGGCGGCTTTGACATCGTCATTGTCTATAAAAAAATATT
AATATAAAGGAGAATTTACA

Downstream 100 bases:

>100_bases
TGTGAGATAAAAGTGGCTCCTTTTCAATGCACATGTCCAATGGTCACTGGTAAGGAGCCTTTCCTTTTAGGAAGATTAAT
AGAAAAAGAGGTATCTTTGA

Product: ABC transporter substrate-binding protein - sugar transport

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MKMKKLASFVMLGASVLGLAACGSSSKEADKSDSAAKTEITWWAFPTFTQEKADDSVGTYEKKIIAAFEKANPDIKVKLE
TIDFTSGPEKITTAIEAGTAPDVLFDAPGRIIEYGKNGKLADLNDLFTDDFIKDVNNDNIIQASKAGDTAYMYPISSAPF
YMALNKKMLKDAGVLDLVKEGWTTDDFEKVLKALKDKGYNPGSFFANGQGGDQGPRAFFANLYSSRITNDDVTKYTTDDA
NSVKSMEKIASWIKDGLLMNGSQYDGSADIQNFANGQTSFTILWSPAQAGTQAKLLEASKVDYVEVPFPSEDGKPELEYL
VNGFAVFNNKDDKKIEASKKFIQFIADDKEWGPKNVVRTGAFPVRSSYGNLYDDKRMAMVSKWTQYYSPYYNTIDGFAEM
RTLWFPMVQAVSNGDEKPAAALKAFTEKANKTIEKAQ

Sequences:

>Translated_437_residues
MKMKKLASFVMLGASVLGLAACGSSSKEADKSDSAAKTEITWWAFPTFTQEKADDSVGTYEKKIIAAFEKANPDIKVKLE
TIDFTSGPEKITTAIEAGTAPDVLFDAPGRIIEYGKNGKLADLNDLFTDDFIKDVNNDNIIQASKAGDTAYMYPISSAPF
YMALNKKMLKDAGVLDLVKEGWTTDDFEKVLKALKDKGYNPGSFFANGQGGDQGPRAFFANLYSSRITNDDVTKYTTDDA
NSVKSMEKIASWIKDGLLMNGSQYDGSADIQNFANGQTSFTILWSPAQAGTQAKLLEASKVDYVEVPFPSEDGKPELEYL
VNGFAVFNNKDDKKIEASKKFIQFIADDKEWGPKNVVRTGAFPVRSSYGNLYDDKRMAMVSKWTQYYSPYYNTIDGFAEM
RTLWFPMVQAVSNGDEKPAAALKAFTEKANKTIEKAQ
>Mature_437_residues
MKMKKLASFVMLGASVLGLAACGSSSKEADKSDSAAKTEITWWAFPTFTQEKADDSVGTYEKKIIAAFEKANPDIKVKLE
TIDFTSGPEKITTAIEAGTAPDVLFDAPGRIIEYGKNGKLADLNDLFTDDFIKDVNNDNIIQASKAGDTAYMYPISSAPF
YMALNKKMLKDAGVLDLVKEGWTTDDFEKVLKALKDKGYNPGSFFANGQGGDQGPRAFFANLYSSRITNDDVTKYTTDDA
NSVKSMEKIASWIKDGLLMNGSQYDGSADIQNFANGQTSFTILWSPAQAGTQAKLLEASKVDYVEVPFPSEDGKPELEYL
VNGFAVFNNKDDKKIEASKKFIQFIADDKEWGPKNVVRTGAFPVRSSYGNLYDDKRMAMVSKWTQYYSPYYNTIDGFAEM
RTLWFPMVQAVSNGDEKPAAALKAFTEKANKTIEKAQ

Specific function: May play role in the degradation of type I rhamnogalacturonan derived from plant cell walls [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 48201; Mature: 48201

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMKKLASFVMLGASVLGLAACGSSSKEADKSDSAAKTEITWWAFPTFTQEKADDSVGTY
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHCCCCCHHH
EKKIIAAFEKANPDIKVKLETIDFTSGPEKITTAIEAGTAPDVLFDAPGRIIEYGKNGKL
HHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCEEECCCCCEEEECCCCCC
ADLNDLFTDDFIKDVNNDNIIQASKAGDTAYMYPISSAPFYMALNKKMLKDAGVLDLVKE
CCHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCEEEHHHHHHHHHCCHHHHHHC
GWTTDDFEKVLKALKDKGYNPGSFFANGQGGDQGPRAFFANLYSSRITNDDVTKYTTDDA
CCCCHHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCH
NSVKSMEKIASWIKDGLLMNGSQYDGSADIQNFANGQTSFTILWSPAQAGTQAKLLEASK
HHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHCCCCEEEEEEECCCCCCCHHHHHHHCC
VDYVEVPFPSEDGKPELEYLVNGFAVFNNKDDKKIEASKKFIQFIADDKEWGPKNVVRTG
CCEEECCCCCCCCCHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCC
AFPVRSSYGNLYDDKRMAMVSKWTQYYSPYYNTIDGFAEMRTLWFPMVQAVSNGDEKPAA
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ALKAFTEKANKTIEKAQ
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKMKKLASFVMLGASVLGLAACGSSSKEADKSDSAAKTEITWWAFPTFTQEKADDSVGTY
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHCCCCCHHH
EKKIIAAFEKANPDIKVKLETIDFTSGPEKITTAIEAGTAPDVLFDAPGRIIEYGKNGKL
HHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCEEECCCCCEEEECCCCCC
ADLNDLFTDDFIKDVNNDNIIQASKAGDTAYMYPISSAPFYMALNKKMLKDAGVLDLVKE
CCHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCEEEHHHHHHHHHCCHHHHHHC
GWTTDDFEKVLKALKDKGYNPGSFFANGQGGDQGPRAFFANLYSSRITNDDVTKYTTDDA
CCCCHHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCH
NSVKSMEKIASWIKDGLLMNGSQYDGSADIQNFANGQTSFTILWSPAQAGTQAKLLEASK
HHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHCCCCEEEEEEECCCCCCCHHHHHHHCC
VDYVEVPFPSEDGKPELEYLVNGFAVFNNKDDKKIEASKKFIQFIADDKEWGPKNVVRTG
CCEEECCCCCCCCCHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCC
AFPVRSSYGNLYDDKRMAMVSKWTQYYSPYYNTIDGFAEMRTLWFPMVQAVSNGDEKPAA
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ALKAFTEKANKTIEKAQ
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]