Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

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The map label for this gene is fliI [H]

Identifier: 195953025

GI number: 195953025

Start: 583500

End: 584777

Strand: Direct

Name: fliI [H]

Synonym: HY04AAS1_0650

Alternate gene names: 195953025

Gene position: 583500-584777 (Clockwise)

Preceding gene: 195953024

Following gene: 195953026

Centisome position: 37.42

GC content: 36.38

Gene sequence:

>1278_bases
ATGTTGTTGAAAAGGCCCTACAAAATATACGGTAAAATAACTAAAGTAAGCGGGGTTTACATAGAAGCTTCCAACTATAG
TTCTGGTGTCGGGGATGAAGTAACGATAGACGGTGATTTCAAAGGTGAGATTATAGGCTTTGACAAGGAAAATGCAATTA
TAATGTGTTTTGACAGTAACGTTAGCGTAAAACCAGGCACTAAAGTGCTATATACCGAAGAACCTGTATCTACATATGTA
TCAGAAGAATTTTTAGGCAAAGTGTTAGATCCTTTTGGAAACATAATACATAGCGACAACACTAAAAGCGTAAAATCGTT
AAAAAAATTACCTTTAAGCTTAGAAAACCACTCTCCTATGGAAAGAAAAAAAATATCAAAAATATTTGATTCTGGTGTAA
GGACCATAAACGCGTTAACAACCATTGGTATAGGACAAAGAATCGGTGTATTTGCTGGAGCAGGTGTTGGAAAAACTACC
ACGCTTGGAATGATAATGAAGCATAGTTATTCCGATGTAGTAGTGCTAGCGCTTATAGGAGAGCGTGGAAGAGAAGTTAG
AGAATATGTAGAGGATATACTAGGAGAGGCTTTTGAAAAATCGGTAGTTATCGTATCTACATCGGACCAAACACCTATAA
TGAAAGTAAAAGGAGCTATAAGCGCTTTGGTACATGCTAGATTTTTTGCTAGCAAAGGTTACAATGTTTTGCTTGTAATG
GATTCTCTAACAAGACTTGCAATGGCCCAAAGAGAAATAGGGCTCTCGGTAGGAGAACCACCAACGTTAAAAGGATATAC
ACCATCTGTATTTCTAACGATGTCTAAAATAATAGAAGGATGTGGGCTCGTTGGAGACTATGGTATCACTGGAATATTTA
GTGTACTGGTAGAAGGTGACGATACTTCACTAGATCCTATAGCCGACAGCGCCATGAGTTTTTTGGATGGACACATACTT
TTATCCCGCAAAATAGCAGATTCTGGCATCTATCCAGCTATAGATCCACTTAAAAGTATAAGCCGTATAATGCCGAATAT
AGTCTCAGATGAGCACTGGGACTACGTGCTTAAGTTTAAACAAATTCTATCTGAATATTATTCGATGGAAGACATCATAA
AAGTAGGACTTTATAGGAAAGGATCTAACCCCACCATAGATAAAGTTTTAGAGCGTAAATCCGATATAGATAATTTTTTT
ATGCAAAATCCAAAAACTGGCATAAATTATAATAATAGCTTACAAGAGTTAAAAGAGCTTGTAAGCAAAATAAGTTAG

Upstream 100 bases:

>100_bases
GTAGAAATTAAATTTATAGAGGAAAACCTAGAAAACGGCGAATTTCAGATAGAAACAGAGGACTTTATTTTGGAAAGATT
TAACAAGGATTTATTAAAAG

Downstream 100 bases:

>100_bases
GAGGTACATAATGAGTACGGTAAATAGCTCAAACTTGGTAGGTGGATTAAACACTGGACAGAGCGTCTCATCACCATCTT
GGCTTCCAAAAGTAAACGTT

Product: FliI/YscN family ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MLLKRPYKIYGKITKVSGVYIEASNYSSGVGDEVTIDGDFKGEIIGFDKENAIIMCFDSNVSVKPGTKVLYTEEPVSTYV
SEEFLGKVLDPFGNIIHSDNTKSVKSLKKLPLSLENHSPMERKKISKIFDSGVRTINALTTIGIGQRIGVFAGAGVGKTT
TLGMIMKHSYSDVVVLALIGERGREVREYVEDILGEAFEKSVVIVSTSDQTPIMKVKGAISALVHARFFASKGYNVLLVM
DSLTRLAMAQREIGLSVGEPPTLKGYTPSVFLTMSKIIEGCGLVGDYGITGIFSVLVEGDDTSLDPIADSAMSFLDGHIL
LSRKIADSGIYPAIDPLKSISRIMPNIVSDEHWDYVLKFKQILSEYYSMEDIIKVGLYRKGSNPTIDKVLERKSDIDNFF
MQNPKTGINYNNSLQELKELVSKIS

Sequences:

>Translated_425_residues
MLLKRPYKIYGKITKVSGVYIEASNYSSGVGDEVTIDGDFKGEIIGFDKENAIIMCFDSNVSVKPGTKVLYTEEPVSTYV
SEEFLGKVLDPFGNIIHSDNTKSVKSLKKLPLSLENHSPMERKKISKIFDSGVRTINALTTIGIGQRIGVFAGAGVGKTT
TLGMIMKHSYSDVVVLALIGERGREVREYVEDILGEAFEKSVVIVSTSDQTPIMKVKGAISALVHARFFASKGYNVLLVM
DSLTRLAMAQREIGLSVGEPPTLKGYTPSVFLTMSKIIEGCGLVGDYGITGIFSVLVEGDDTSLDPIADSAMSFLDGHIL
LSRKIADSGIYPAIDPLKSISRIMPNIVSDEHWDYVLKFKQILSEYYSMEDIIKVGLYRKGSNPTIDKVLERKSDIDNFF
MQNPKTGINYNNSLQELKELVSKIS
>Mature_425_residues
MLLKRPYKIYGKITKVSGVYIEASNYSSGVGDEVTIDGDFKGEIIGFDKENAIIMCFDSNVSVKPGTKVLYTEEPVSTYV
SEEFLGKVLDPFGNIIHSDNTKSVKSLKKLPLSLENHSPMERKKISKIFDSGVRTINALTTIGIGQRIGVFAGAGVGKTT
TLGMIMKHSYSDVVVLALIGERGREVREYVEDILGEAFEKSVVIVSTSDQTPIMKVKGAISALVHARFFASKGYNVLLVM
DSLTRLAMAQREIGLSVGEPPTLKGYTPSVFLTMSKIIEGCGLVGDYGITGIFSVLVEGDDTSLDPIADSAMSFLDGHIL
LSRKIADSGIYPAIDPLKSISRIMPNIVSDEHWDYVLKFKQILSEYYSMEDIIKVGLYRKGSNPTIDKVLERKSDIDNFF
MQNPKTGINYNNSLQELKELVSKIS

Specific function: Probable catalytic subunit of a protein translocase for flagellum-specific export, or a proton translocase involved in local circuits at the flagellum [H]

COG id: COG1157

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway ATPase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family [H]

Homologues:

Organism=Homo sapiens, GI32189394, Length=333, Percent_Identity=30.9309309309309, Blast_Score=155, Evalue=9e-38,
Organism=Homo sapiens, GI50345984, Length=319, Percent_Identity=24.4514106583072, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI4757810, Length=319, Percent_Identity=24.4514106583072, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI19913424, Length=300, Percent_Identity=26, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI19913426, Length=328, Percent_Identity=23.780487804878, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI19913428, Length=328, Percent_Identity=23.1707317073171, Blast_Score=79, Evalue=8e-15,
Organism=Escherichia coli, GI1788251, Length=435, Percent_Identity=39.3103448275862, Blast_Score=311, Evalue=5e-86,
Organism=Escherichia coli, GI1790170, Length=326, Percent_Identity=27.6073619631902, Blast_Score=139, Evalue=5e-34,
Organism=Escherichia coli, GI1790172, Length=340, Percent_Identity=22.0588235294118, Blast_Score=81, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI25144756, Length=337, Percent_Identity=29.3768545994065, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI71988080, Length=325, Percent_Identity=22.7692307692308, Blast_Score=85, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI71988063, Length=325, Percent_Identity=22.7692307692308, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17570191, Length=326, Percent_Identity=23.0061349693252, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17565854, Length=298, Percent_Identity=26.8456375838926, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17510931, Length=325, Percent_Identity=23.0769230769231, Blast_Score=81, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6322581, Length=416, Percent_Identity=29.8076923076923, Blast_Score=147, Evalue=3e-36,
Organism=Saccharomyces cerevisiae, GI6319603, Length=329, Percent_Identity=24.9240121580547, Blast_Score=95, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6319370, Length=337, Percent_Identity=24.9258160237389, Blast_Score=87, Evalue=6e-18,
Organism=Drosophila melanogaster, GI24638766, Length=339, Percent_Identity=29.4985250737463, Blast_Score=144, Evalue=8e-35,
Organism=Drosophila melanogaster, GI28574560, Length=342, Percent_Identity=31.2865497076023, Blast_Score=138, Evalue=6e-33,
Organism=Drosophila melanogaster, GI24658560, Length=319, Percent_Identity=23.5109717868339, Blast_Score=90, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24583992, Length=300, Percent_Identity=26.6666666666667, Blast_Score=88, Evalue=9e-18,
Organism=Drosophila melanogaster, GI24583988, Length=300, Percent_Identity=26, Blast_Score=85, Evalue=9e-17,
Organism=Drosophila melanogaster, GI24583986, Length=300, Percent_Identity=26, Blast_Score=85, Evalue=9e-17,
Organism=Drosophila melanogaster, GI24583984, Length=300, Percent_Identity=26, Blast_Score=85, Evalue=9e-17,
Organism=Drosophila melanogaster, GI20129479, Length=298, Percent_Identity=25.503355704698, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI281361666, Length=335, Percent_Identity=22.6865671641791, Blast_Score=82, Evalue=6e-16,
Organism=Drosophila melanogaster, GI24646341, Length=335, Percent_Identity=22.6865671641791, Blast_Score=82, Evalue=6e-16,
Organism=Drosophila melanogaster, GI17136796, Length=335, Percent_Identity=22.6865671641791, Blast_Score=82, Evalue=6e-16,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR004100
- InterPro:   IPR005714 [H]

Pfam domain/function: PF00006 ATP-synt_ab; PF02874 ATP-synt_ab_N [H]

EC number: =3.6.3.14 [H]

Molecular weight: Translated: 46721; Mature: 46721

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLKRPYKIYGKITKVSGVYIEASNYSSGVGDEVTIDGDFKGEIIGFDKENAIIMCFDSN
CCCCCCHHHHEEEEEEEEEEEEECCCCCCCCCEEEECCCCCCCEEEECCCCEEEEEECCC
VSVKPGTKVLYTEEPVSTYVSEEFLGKVLDPFGNIIHSDNTKSVKSLKKLPLSLENHSPM
CCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCH
ERKKISKIFDSGVRTINALTTIGIGQRIGVFAGAGVGKTTTLGMIMKHSYSDVVVLALIG
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCCCCHHHHHHHHHCCCCCEEEEEECC
ERGREVREYVEDILGEAFEKSVVIVSTSDQTPIMKVKGAISALVHARFFASKGYNVLLVM
CCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEH
DSLTRLAMAQREIGLSVGEPPTLKGYTPSVFLTMSKIIEGCGLVGDYGITGIFSVLVEGD
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCC
DTSLDPIADSAMSFLDGHILLSRKIADSGIYPAIDPLKSISRIMPNIVSDEHWDYVLKFK
CCCCCHHHHHHHHHHCCHHEEEEHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
QILSEYYSMEDIIKVGLYRKGSNPTIDKVLERKSDIDNFFMQNPKTGINYNNSLQELKEL
HHHHHHHCHHHHHHHHCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
VSKIS
HHHCC
>Mature Secondary Structure
MLLKRPYKIYGKITKVSGVYIEASNYSSGVGDEVTIDGDFKGEIIGFDKENAIIMCFDSN
CCCCCCHHHHEEEEEEEEEEEEECCCCCCCCCEEEECCCCCCCEEEECCCCEEEEEECCC
VSVKPGTKVLYTEEPVSTYVSEEFLGKVLDPFGNIIHSDNTKSVKSLKKLPLSLENHSPM
CCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCH
ERKKISKIFDSGVRTINALTTIGIGQRIGVFAGAGVGKTTTLGMIMKHSYSDVVVLALIG
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCCCCHHHHHHHHHCCCCCEEEEEECC
ERGREVREYVEDILGEAFEKSVVIVSTSDQTPIMKVKGAISALVHARFFASKGYNVLLVM
CCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEH
DSLTRLAMAQREIGLSVGEPPTLKGYTPSVFLTMSKIIEGCGLVGDYGITGIFSVLVEGD
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCC
DTSLDPIADSAMSFLDGHILLSRKIADSGIYPAIDPLKSISRIMPNIVSDEHWDYVLKFK
CCCCCHHHHHHHHHHCCHHEEEEHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
QILSEYYSMEDIIKVGLYRKGSNPTIDKVLERKSDIDNFFMQNPKTGINYNNSLQELKEL
HHHHHHHCHHHHHHHHCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
VSKIS
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]