Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

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The map label for this gene is 195953024

Identifier: 195953024

GI number: 195953024

Start: 582785

End: 583534

Strand: Direct

Name: 195953024

Synonym: HY04AAS1_0649

Alternate gene names: NA

Gene position: 582785-583534 (Clockwise)

Preceding gene: 195953023

Following gene: 195953025

Centisome position: 37.37

GC content: 27.6

Gene sequence:

>750_bases
ATGAATGATCACTTTGAAGCAATACAAAACATTACGTTTGAAATTCAAAACAAAGAGTCTTCACCAAACAAAACGTCAGA
AACATCTGTTAACAAAGTTTTAGAGCTTATAAAAAAAGAAACACAAGCTAAAATACTACAATACAGAAAAACTGTAGAGC
AATTAGAACAACAAATAACGTTAAAAGATCAAGAGATTAAACGTCTTTTGGAAAAACACAAAAAGACTGAAGAAGAAATC
GAGACTATTAAAAAAGAACTAGAAAACATTGAACAAGAAAAAAATGCTTTAATAGCCGAAAAAGAACAATTGAAAGCTAC
CATAGAACAAATAAAGGAAAACGAAGCTAAGGAAGAAGCCTATAAAAATGCCGTTTTACAAAGTTTAGAAACTATCAAAA
ATACCATAATTCAAAGGGAGCAACTAACCATAGAAGAGATAAGCACATTGATATCAACTATACTAAGTAGCTTATACGCA
AAATGTAGTATAGATTTAGACTCTATAATAAAAAAAATTTTAGAGGATAGTAATATATTTAAACATTTCATTGTGGTAAA
AGCCAACAAAACATTTATAGAAACTTTTCAAAAATATATAAAAAATCTAAACAATGTAGAAATTAAATTTATAGAGGAAA
ACCTAGAAAACGGCGAATTTCAGATAGAAACAGAGGACTTTATTTTGGAAAGATTTAACAAGGATTTATTAAAAGATGTT
GTTGAAAAGGCCCTACAAAATATACGGTAA

Upstream 100 bases:

>100_bases
GTAAGAGTCTCTGAAGTAGAAAAAGCTCAAAAAGAGATTATAGCCGTTATCAAAAAGTTGGCAGATGAAGGCAAGATAGA
TTTGACTGGTGGTGCTTCTT

Downstream 100 bases:

>100_bases
AATAACTAAAGTAAGCGGGGTTTACATAGAAGCTTCCAACTATAGTTCTGGTGTCGGGGATGAAGTAACGATAGACGGTG
ATTTCAAAGGTGAGATTATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MNDHFEAIQNITFEIQNKESSPNKTSETSVNKVLELIKKETQAKILQYRKTVEQLEQQITLKDQEIKRLLEKHKKTEEEI
ETIKKELENIEQEKNALIAEKEQLKATIEQIKENEAKEEAYKNAVLQSLETIKNTIIQREQLTIEEISTLISTILSSLYA
KCSIDLDSIIKKILEDSNIFKHFIVVKANKTFIETFQKYIKNLNNVEIKFIEENLENGEFQIETEDFILERFNKDLLKDV
VEKALQNIR

Sequences:

>Translated_249_residues
MNDHFEAIQNITFEIQNKESSPNKTSETSVNKVLELIKKETQAKILQYRKTVEQLEQQITLKDQEIKRLLEKHKKTEEEI
ETIKKELENIEQEKNALIAEKEQLKATIEQIKENEAKEEAYKNAVLQSLETIKNTIIQREQLTIEEISTLISTILSSLYA
KCSIDLDSIIKKILEDSNIFKHFIVVKANKTFIETFQKYIKNLNNVEIKFIEENLENGEFQIETEDFILERFNKDLLKDV
VEKALQNIR
>Mature_249_residues
MNDHFEAIQNITFEIQNKESSPNKTSETSVNKVLELIKKETQAKILQYRKTVEQLEQQITLKDQEIKRLLEKHKKTEEEI
ETIKKELENIEQEKNALIAEKEQLKATIEQIKENEAKEEAYKNAVLQSLETIKNTIIQREQLTIEEISTLISTILSSLYA
KCSIDLDSIIKKILEDSNIFKHFIVVKANKTFIETFQKYIKNLNNVEIKFIEENLENGEFQIETEDFILERFNKDLLKDV
VEKALQNIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29273; Mature: 29273

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDHFEAIQNITFEIQNKESSPNKTSETSVNKVLELIKKETQAKILQYRKTVEQLEQQIT
CCCHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LKDQEIKRLLEKHKKTEEEIETIKKELENIEQEKNALIAEKEQLKATIEQIKENEAKEEA
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YKNAVLQSLETIKNTIIQREQLTIEEISTLISTILSSLYAKCSIDLDSIIKKILEDSNIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHH
KHFIVVKANKTFIETFQKYIKNLNNVEIKFIEENLENGEFQIETEDFILERFNKDLLKDV
HHHHHEECCHHHHHHHHHHHHCCCCCEEEEEHHHCCCCCEEEEHHHHHHHHHHHHHHHHH
VEKALQNIR
HHHHHHHCC
>Mature Secondary Structure
MNDHFEAIQNITFEIQNKESSPNKTSETSVNKVLELIKKETQAKILQYRKTVEQLEQQIT
CCCHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LKDQEIKRLLEKHKKTEEEIETIKKELENIEQEKNALIAEKEQLKATIEQIKENEAKEEA
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YKNAVLQSLETIKNTIIQREQLTIEEISTLISTILSSLYAKCSIDLDSIIKKILEDSNIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHH
KHFIVVKANKTFIETFQKYIKNLNNVEIKFIEENLENGEFQIETEDFILERFNKDLLKDV
HHHHHEECCHHHHHHHHHHHHCCCCCEEEEEHHHCCCCCEEEEHHHHHHHHHHHHHHHHH
VEKALQNIR
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA