| Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
|---|---|
| Accession | NC_011126 |
| Length | 1,559,514 |
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The map label for this gene is 195953024
Identifier: 195953024
GI number: 195953024
Start: 582785
End: 583534
Strand: Direct
Name: 195953024
Synonym: HY04AAS1_0649
Alternate gene names: NA
Gene position: 582785-583534 (Clockwise)
Preceding gene: 195953023
Following gene: 195953025
Centisome position: 37.37
GC content: 27.6
Gene sequence:
>750_bases ATGAATGATCACTTTGAAGCAATACAAAACATTACGTTTGAAATTCAAAACAAAGAGTCTTCACCAAACAAAACGTCAGA AACATCTGTTAACAAAGTTTTAGAGCTTATAAAAAAAGAAACACAAGCTAAAATACTACAATACAGAAAAACTGTAGAGC AATTAGAACAACAAATAACGTTAAAAGATCAAGAGATTAAACGTCTTTTGGAAAAACACAAAAAGACTGAAGAAGAAATC GAGACTATTAAAAAAGAACTAGAAAACATTGAACAAGAAAAAAATGCTTTAATAGCCGAAAAAGAACAATTGAAAGCTAC CATAGAACAAATAAAGGAAAACGAAGCTAAGGAAGAAGCCTATAAAAATGCCGTTTTACAAAGTTTAGAAACTATCAAAA ATACCATAATTCAAAGGGAGCAACTAACCATAGAAGAGATAAGCACATTGATATCAACTATACTAAGTAGCTTATACGCA AAATGTAGTATAGATTTAGACTCTATAATAAAAAAAATTTTAGAGGATAGTAATATATTTAAACATTTCATTGTGGTAAA AGCCAACAAAACATTTATAGAAACTTTTCAAAAATATATAAAAAATCTAAACAATGTAGAAATTAAATTTATAGAGGAAA ACCTAGAAAACGGCGAATTTCAGATAGAAACAGAGGACTTTATTTTGGAAAGATTTAACAAGGATTTATTAAAAGATGTT GTTGAAAAGGCCCTACAAAATATACGGTAA
Upstream 100 bases:
>100_bases GTAAGAGTCTCTGAAGTAGAAAAAGCTCAAAAAGAGATTATAGCCGTTATCAAAAAGTTGGCAGATGAAGGCAAGATAGA TTTGACTGGTGGTGCTTCTT
Downstream 100 bases:
>100_bases AATAACTAAAGTAAGCGGGGTTTACATAGAAGCTTCCAACTATAGTTCTGGTGTCGGGGATGAAGTAACGATAGACGGTG ATTTCAAAGGTGAGATTATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MNDHFEAIQNITFEIQNKESSPNKTSETSVNKVLELIKKETQAKILQYRKTVEQLEQQITLKDQEIKRLLEKHKKTEEEI ETIKKELENIEQEKNALIAEKEQLKATIEQIKENEAKEEAYKNAVLQSLETIKNTIIQREQLTIEEISTLISTILSSLYA KCSIDLDSIIKKILEDSNIFKHFIVVKANKTFIETFQKYIKNLNNVEIKFIEENLENGEFQIETEDFILERFNKDLLKDV VEKALQNIR
Sequences:
>Translated_249_residues MNDHFEAIQNITFEIQNKESSPNKTSETSVNKVLELIKKETQAKILQYRKTVEQLEQQITLKDQEIKRLLEKHKKTEEEI ETIKKELENIEQEKNALIAEKEQLKATIEQIKENEAKEEAYKNAVLQSLETIKNTIIQREQLTIEEISTLISTILSSLYA KCSIDLDSIIKKILEDSNIFKHFIVVKANKTFIETFQKYIKNLNNVEIKFIEENLENGEFQIETEDFILERFNKDLLKDV VEKALQNIR >Mature_249_residues MNDHFEAIQNITFEIQNKESSPNKTSETSVNKVLELIKKETQAKILQYRKTVEQLEQQITLKDQEIKRLLEKHKKTEEEI ETIKKELENIEQEKNALIAEKEQLKATIEQIKENEAKEEAYKNAVLQSLETIKNTIIQREQLTIEEISTLISTILSSLYA KCSIDLDSIIKKILEDSNIFKHFIVVKANKTFIETFQKYIKNLNNVEIKFIEENLENGEFQIETEDFILERFNKDLLKDV VEKALQNIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29273; Mature: 29273
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDHFEAIQNITFEIQNKESSPNKTSETSVNKVLELIKKETQAKILQYRKTVEQLEQQIT CCCHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LKDQEIKRLLEKHKKTEEEIETIKKELENIEQEKNALIAEKEQLKATIEQIKENEAKEEA CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YKNAVLQSLETIKNTIIQREQLTIEEISTLISTILSSLYAKCSIDLDSIIKKILEDSNIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHH KHFIVVKANKTFIETFQKYIKNLNNVEIKFIEENLENGEFQIETEDFILERFNKDLLKDV HHHHHEECCHHHHHHHHHHHHCCCCCEEEEEHHHCCCCCEEEEHHHHHHHHHHHHHHHHH VEKALQNIR HHHHHHHCC >Mature Secondary Structure MNDHFEAIQNITFEIQNKESSPNKTSETSVNKVLELIKKETQAKILQYRKTVEQLEQQIT CCCHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LKDQEIKRLLEKHKKTEEEIETIKKELENIEQEKNALIAEKEQLKATIEQIKENEAKEEA CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YKNAVLQSLETIKNTIIQREQLTIEEISTLISTILSSLYAKCSIDLDSIIKKILEDSNIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHH KHFIVVKANKTFIETFQKYIKNLNNVEIKFIEENLENGEFQIETEDFILERFNKDLLKDV HHHHHEECCHHHHHHHHHHHHCCCCCEEEEEHHHCCCCCEEEEHHHHHHHHHHHHHHHHH VEKALQNIR HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA