| Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
|---|---|
| Accession | NC_011126 |
| Length | 1,559,514 |
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The map label for this gene is dsbC [C]
Identifier: 195953017
GI number: 195953017
Start: 576262
End: 577089
Strand: Direct
Name: dsbC [C]
Synonym: HY04AAS1_0642
Alternate gene names: 195953017
Gene position: 576262-577089 (Clockwise)
Preceding gene: 195953016
Following gene: 195953018
Centisome position: 36.95
GC content: 37.92
Gene sequence:
>828_bases ATGAATATTGAATTTAAAAAAGCTAAACTTTTTAAGCCAAGTTTGTTGCTTGCAGTAGCTATCTTTGGCATCGGTTTAGG TGCTTGTAGTAAACTTCAAACTACAAAATGCCCATCTAACAACACTATAGTTGCAAACGTAGAGCATTTTACACCGCCTG GAGCAAAAGTCCAAGTAGTAGCAGAAAAACCTTTAAAACAAATAAAAGGTCTTTGTGAAGTAGTTATAAAAATAAACGAT GGACCACCAAATGTAATATATACGGATCCAAAAGGAAACTATTTTATAGCTGGTCAGCTTCTAAACGCTATTACAAAGCA AAATCTTACACAAGAAACTATGAACCAGTTTTTAAAAGTAAGCAAAAATGAAGAATCAGGACTAAATCAGTATGTAGCTT TTAGTTATTACAAAGGGAAATCTTATTTCGGCACAAATCCACCACCAGCAGACAAATACATATATCTAATCACTGATCCT AAGTGCCCATTCTGCCATGAGGCGGAACCTCTCATACAAAAATGGGCAGATAAAAATGGCGTAGAAGTAAGAGTTATACT TTTCCCGCTACCAATACATCCAGGGGCTTTCCAATCCGCTGTAGGGCTTTGGTGCAACAAAAAAGGATGGAACAGCCTAC ACGCTGCTTACAACGCAAAAGCACCGCTATCTCAATGTCCAGAAGGAGATGCTTTTATCAAAAACTCTATGCAAGAAGCT ATGAAACTTGGAGTGCAAGGCACACCCACTATTATAGGCATGGATGGTAAAATGCACCCAGGAGCCCCAAGTAGTGAAAA ACAGTTAGACCAATGGTTAGGTAAATAA
Upstream 100 bases:
>100_bases TGAACATCTATTAGAAACAACAAAAACAGCTTCATAAAACACTTTTAGATAATCACATAAATTTCATGATATACTAATAT AATATTGCGTGGAGGTAATT
Downstream 100 bases:
>100_bases ATCATTTTATTTTTAGGCTTTTTACAGTGTGAATATTTTAATAGCTAGTGAAAAGTATAAAGAACTAAGATATCCTAAAA ACCATCCCTTGAGGGTGCCT
Product: thiol:disulfide interchange protein
Products: NA
Alternate protein names: ThiolDisulfide Interchange Protein; ThiolDisulphide Interchange Protein; Protein-Disulfide Isomerase; Disulfide Bond Isomerase DsbC/G-Like Protein; Thiol-Disulfide Interchange Protein DsbC; Disulphide Bond Isomerase DsbC/G-Like Protein; Protein-Disulfide Isomerase-Like Protein; Protein Disulfide-Isomerase; Protein Disulfide Isomerase; ThiolDisulfide Interchange Protein DsbA; Thioredoxin Conserved Site; Protein-Disulfide Isomerase-Like
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MNIEFKKAKLFKPSLLLAVAIFGIGLGACSKLQTTKCPSNNTIVANVEHFTPPGAKVQVVAEKPLKQIKGLCEVVIKIND GPPNVIYTDPKGNYFIAGQLLNAITKQNLTQETMNQFLKVSKNEESGLNQYVAFSYYKGKSYFGTNPPPADKYIYLITDP KCPFCHEAEPLIQKWADKNGVEVRVILFPLPIHPGAFQSAVGLWCNKKGWNSLHAAYNAKAPLSQCPEGDAFIKNSMQEA MKLGVQGTPTIIGMDGKMHPGAPSSEKQLDQWLGK
Sequences:
>Translated_275_residues MNIEFKKAKLFKPSLLLAVAIFGIGLGACSKLQTTKCPSNNTIVANVEHFTPPGAKVQVVAEKPLKQIKGLCEVVIKIND GPPNVIYTDPKGNYFIAGQLLNAITKQNLTQETMNQFLKVSKNEESGLNQYVAFSYYKGKSYFGTNPPPADKYIYLITDP KCPFCHEAEPLIQKWADKNGVEVRVILFPLPIHPGAFQSAVGLWCNKKGWNSLHAAYNAKAPLSQCPEGDAFIKNSMQEA MKLGVQGTPTIIGMDGKMHPGAPSSEKQLDQWLGK >Mature_275_residues MNIEFKKAKLFKPSLLLAVAIFGIGLGACSKLQTTKCPSNNTIVANVEHFTPPGAKVQVVAEKPLKQIKGLCEVVIKIND GPPNVIYTDPKGNYFIAGQLLNAITKQNLTQETMNQFLKVSKNEESGLNQYVAFSYYKGKSYFGTNPPPADKYIYLITDP KCPFCHEAEPLIQKWADKNGVEVRVILFPLPIHPGAFQSAVGLWCNKKGWNSLHAAYNAKAPLSQCPEGDAFIKNSMQEA MKLGVQGTPTIIGMDGKMHPGAPSSEKQLDQWLGK
Specific function: Required For Disulfide Bond Formation In Some Periplasmic Proteins. Acts By Transferring Its Disulfide Bond To Other Proteins And Is Reduced In The Process. Dsbc Is Reoxidized By A Yet Uncharacterized Protein. Also Acts As A Disulfide Isomerase. [C]
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 5.3.4.1
Molecular weight: Translated: 30167; Mature: 30167
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIEFKKAKLFKPSLLLAVAIFGIGLGACSKLQTTKCPSNNTIVANVEHFTPPGAKVQVV CCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHCCCCCCEEEEE AEKPLKQIKGLCEVVIKINDGPPNVIYTDPKGNYFIAGQLLNAITKQNLTQETMNQFLKV EHHHHHHHHHHEEEEEEECCCCCCEEEECCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHC SKNEESGLNQYVAFSYYKGKSYFGTNPPPADKYIYLITDPKCPFCHEAEPLIQKWADKNG CCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCC VEVRVILFPLPIHPGAFQSAVGLWCNKKGWNSLHAAYNAKAPLSQCPEGDAFIKNSMQEA CEEEEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHCCCCHHHHHHHHHHH MKLGVQGTPTIIGMDGKMHPGAPSSEKQLDQWLGK HHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure MNIEFKKAKLFKPSLLLAVAIFGIGLGACSKLQTTKCPSNNTIVANVEHFTPPGAKVQVV CCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHCCCCCCEEEEE AEKPLKQIKGLCEVVIKINDGPPNVIYTDPKGNYFIAGQLLNAITKQNLTQETMNQFLKV EHHHHHHHHHHEEEEEEECCCCCCEEEECCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHC SKNEESGLNQYVAFSYYKGKSYFGTNPPPADKYIYLITDPKCPFCHEAEPLIQKWADKNG CCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCC VEVRVILFPLPIHPGAFQSAVGLWCNKKGWNSLHAAYNAKAPLSQCPEGDAFIKNSMQEA CEEEEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHCCCCHHHHHHHHHHH MKLGVQGTPTIIGMDGKMHPGAPSSEKQLDQWLGK HHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA