| Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
|---|---|
| Accession | NC_011126 |
| Length | 1,559,514 |
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The map label for this gene is 195953004
Identifier: 195953004
GI number: 195953004
Start: 561646
End: 561945
Strand: Direct
Name: 195953004
Synonym: HY04AAS1_0629
Alternate gene names: NA
Gene position: 561646-561945 (Clockwise)
Preceding gene: 195953003
Following gene: 195953006
Centisome position: 36.01
GC content: 32.0
Gene sequence:
>300_bases ATGAGTAGGATAGAAGGAGATATCACTAGAAACGCTGGGCTAGATACTTCTATTGCAAAGAAAGATAAATTACAAAAACA AAGCAGTAGTGTTGTAAACGAAGAGGTTACACCCCAAGAAAACAGTGAGCAGGCTTACAAAGTAGAACTATCATCTATAG CTAAAAATATAAATTCAAACTCCGACGAAAATATAAAAGATATGTCAAAGAAGATTGAAGAGATAAAAGCCAAAATTGCT AATGGTTCTTATGAGATAGATACCAACAAAATAGTAGAAGGTTTGTTAAAATACTTTTAG
Upstream 100 bases:
>100_bases TCTTGGGAGCCAGAGCTTTGTTTTATATTCATAAAAGCCTTGCAAACAATTTATATTAAAATATCTTAAATATATTCCGA TATTTATATAGAGGTGTTAT
Downstream 100 bases:
>100_bases TTAATATCCCAAGGGCGATTAGCTCAGTTGGGAGAGCGCCATCCTCACACGGTGGAGGTCGCAGGTTCGAGCCCTGTATC GCCCATTATTGGGAATCATT
Product: anti-sigma-28 factor FlgM
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MSRIEGDITRNAGLDTSIAKKDKLQKQSSSVVNEEVTPQENSEQAYKVELSSIAKNINSNSDENIKDMSKKIEEIKAKIA NGSYEIDTNKIVEGLLKYF
Sequences:
>Translated_99_residues MSRIEGDITRNAGLDTSIAKKDKLQKQSSSVVNEEVTPQENSEQAYKVELSSIAKNINSNSDENIKDMSKKIEEIKAKIA NGSYEIDTNKIVEGLLKYF >Mature_98_residues SRIEGDITRNAGLDTSIAKKDKLQKQSSSVVNEEVTPQENSEQAYKVELSSIAKNINSNSDENIKDMSKKIEEIKAKIAN GSYEIDTNKIVEGLLKYF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11053; Mature: 10922
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRIEGDITRNAGLDTSIAKKDKLQKQSSSVVNEEVTPQENSEQAYKVELSSIAKNINSN CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC SDENIKDMSKKIEEIKAKIANGSYEIDTNKIVEGLLKYF CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC >Mature Secondary Structure SRIEGDITRNAGLDTSIAKKDKLQKQSSSVVNEEVTPQENSEQAYKVELSSIAKNINSN CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC SDENIKDMSKKIEEIKAKIANGSYEIDTNKIVEGLLKYF CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA