| Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
|---|---|
| Accession | NC_011126 |
| Length | 1,559,514 |
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The map label for this gene is 195952972
Identifier: 195952972
GI number: 195952972
Start: 533886
End: 534281
Strand: Direct
Name: 195952972
Synonym: HY04AAS1_0597
Alternate gene names: NA
Gene position: 533886-534281 (Clockwise)
Preceding gene: 195952963
Following gene: 195952973
Centisome position: 34.23
GC content: 34.34
Gene sequence:
>396_bases ATGGGCAAATTAGCTTTCGTAATATCCACTCAAGTTCATGAGAAAATTCAATTGGCCGCTATGATGGCCTCAATACACGC TACTGTAGGTGGAGAAGTTTTATTTTTTGTCTCCATGAACGGTGTTTTGGCTTTTCAAAAAGGTAAAGAGCTAAAAGACA GAATTATACCTGAGGGAGAATTTTCTAAACTTATGCTGAGTAAAAACGTTCCTAATTTTATAAATATATTAAAACAAATA AAGATGCTTGGAGATGTAAAAATATACGCATGCTCTATGGCAATGGATGTTTTAGGATGGCACATGGAAGATTTGGAAGA GGGTTTGTTTGACGATATCATAGGCCTTACATCTTTTCTTGATATGGCTGAAGATGCAAAAATTCTATTTATATGA
Upstream 100 bases:
>100_bases TATATACTCTTATAAGCATATTTTACACAATAAATAAATAACATTTATGGAATAGTTAAAACTTAGTTGCTAAAATTAAA TAAAAAGACAGGAGGAAGTT
Downstream 100 bases:
>100_bases GGAGGTTTGAATGGCTGATAAGGTAATTGACGCAAGAGGAAGCTTTTGCCCGGGGCCTTTGATGGAGCTTATAGCTGCTA TAAAGTCAAATCCCGTAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MGKLAFVISTQVHEKIQLAAMMASIHATVGGEVLFFVSMNGVLAFQKGKELKDRIIPEGEFSKLMLSKNVPNFINILKQI KMLGDVKIYACSMAMDVLGWHMEDLEEGLFDDIIGLTSFLDMAEDAKILFI
Sequences:
>Translated_131_residues MGKLAFVISTQVHEKIQLAAMMASIHATVGGEVLFFVSMNGVLAFQKGKELKDRIIPEGEFSKLMLSKNVPNFINILKQI KMLGDVKIYACSMAMDVLGWHMEDLEEGLFDDIIGLTSFLDMAEDAKILFI >Mature_130_residues GKLAFVISTQVHEKIQLAAMMASIHATVGGEVLFFVSMNGVLAFQKGKELKDRIIPEGEFSKLMLSKNVPNFINILKQIK MLGDVKIYACSMAMDVLGWHMEDLEEGLFDDIIGLTSFLDMAEDAKILFI
Specific function: Unknown
COG id: COG2210
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14586; Mature: 14454
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 7.6 %Met (Translated Protein) 8.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 6.9 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKLAFVISTQVHEKIQLAAMMASIHATVGGEVLFFVSMNGVLAFQKGKELKDRIIPEGE CCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEECCCCHHHHHCCCCCC FSKLMLSKNVPNFINILKQIKMLGDVKIYACSMAMDVLGWHMEDLEEGLFDDIIGLTSFL HHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH DMAEDAKILFI HHCCCCEEEEC >Mature Secondary Structure GKLAFVISTQVHEKIQLAAMMASIHATVGGEVLFFVSMNGVLAFQKGKELKDRIIPEGE CCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEECCCCHHHHHCCCCCC FSKLMLSKNVPNFINILKQIKMLGDVKIYACSMAMDVLGWHMEDLEEGLFDDIIGLTSFL HHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH DMAEDAKILFI HHCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA