Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

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The map label for this gene is 195952963

Identifier: 195952963

GI number: 195952963

Start: 524887

End: 525654

Strand: Direct

Name: 195952963

Synonym: HY04AAS1_0588

Alternate gene names: NA

Gene position: 524887-525654 (Clockwise)

Preceding gene: 195952962

Following gene: 195952972

Centisome position: 33.66

GC content: 30.08

Gene sequence:

>768_bases
ATGCAAAGACGTAAAATATCTTTTGTAATTCTTACAAAAAACGAAGAAAAAAACATAAAAAGAGCCATAGATAGCATAAA
AGATGTAGCAGATGAGATACTTGTAATAGATTCAGGTTCTACAGACAAAACCATAGATATTGCAAAATCATGCGGAGCCA
AAGTCATATTTAACGAATGGATAAGCTATGCGGCCCAGAAGAACTTTGGTATATCAAAAGCCAAAAACGATATTGTTTTT
ATCTTAGATGCCGATGAAGAACTATCGGATGAGCTTAAAAACTCTTTAAAAGATTTTTTATCATCAGATTATGAGATAGG
TATAATAACAAGACGTACATTTTACATGGGAGATTTTTTAAAACATATATGGAACGATGAAAAGCTTATAAGAGTTTTTA
AAAAAGATGTTTGTAAATATAGCGGTGATCTTCACGAAAAGGTCATATGCAATCACCACAAATATTATGAGCTAAAAGGC
TATTTAAACCACTATTCTTTTAAAAACCTAAAAGATCAGTTTGAAAGAACATTAAAATACGCAAAAACAAGCGCCGATAT
CATGTGTAAAAACAATAAGCCCTTTCATGTTTACAATCTTATCCTAAACCCCTTTTGGATCTTTTTTAAATTTTTTATAT
TAAAAGCCGGATATAAAGAAGGCACAAAAGGACTTATCATAGCTTTTTCTGGTATGTTTTATGTGTTTATGAAATACGCT
TTTTTATACGAATGCCAAAAATCCAAAGAAAAAGAGCTTTGGAAATAA

Upstream 100 bases:

>100_bases
ATACCATCAAAAGAAGAGCTTTTTGATAGACTTGATGAGCTAAAAGATAGCGTTATTGTGTTTATGGGGGCTGGTTCTAT
AGGCCAATGGTCTCATGAAT

Downstream 100 bases:

>100_bases
ATTCACTTACCAAATATGCTTTTTACAATGCCAAAGATAGATTTGTTGTTTTCTTCTTGGTCTAATTTTCTTAGTTCTTC
TATTAGTTTTTGCTGTTTTT

Product: family 2 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MQRRKISFVILTKNEEKNIKRAIDSIKDVADEILVIDSGSTDKTIDIAKSCGAKVIFNEWISYAAQKNFGISKAKNDIVF
ILDADEELSDELKNSLKDFLSSDYEIGIITRRTFYMGDFLKHIWNDEKLIRVFKKDVCKYSGDLHEKVICNHHKYYELKG
YLNHYSFKNLKDQFERTLKYAKTSADIMCKNNKPFHVYNLILNPFWIFFKFFILKAGYKEGTKGLIIAFSGMFYVFMKYA
FLYECQKSKEKELWK

Sequences:

>Translated_255_residues
MQRRKISFVILTKNEEKNIKRAIDSIKDVADEILVIDSGSTDKTIDIAKSCGAKVIFNEWISYAAQKNFGISKAKNDIVF
ILDADEELSDELKNSLKDFLSSDYEIGIITRRTFYMGDFLKHIWNDEKLIRVFKKDVCKYSGDLHEKVICNHHKYYELKG
YLNHYSFKNLKDQFERTLKYAKTSADIMCKNNKPFHVYNLILNPFWIFFKFFILKAGYKEGTKGLIIAFSGMFYVFMKYA
FLYECQKSKEKELWK
>Mature_255_residues
MQRRKISFVILTKNEEKNIKRAIDSIKDVADEILVIDSGSTDKTIDIAKSCGAKVIFNEWISYAAQKNFGISKAKNDIVF
ILDADEELSDELKNSLKDFLSSDYEIGIITRRTFYMGDFLKHIWNDEKLIRVFKKDVCKYSGDLHEKVICNHHKYYELKG
YLNHYSFKNLKDQFERTLKYAKTSADIMCKNNKPFHVYNLILNPFWIFFKFFILKAGYKEGTKGLIIAFSGMFYVFMKYA
FLYECQKSKEKELWK

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. WaaE/kdtX subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 30085; Mature: 30085

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRRKISFVILTKNEEKNIKRAIDSIKDVADEILVIDSGSTDKTIDIAKSCGAKVIFNEW
CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHCCCHHHHHHH
ISYAAQKNFGISKAKNDIVFILDADEELSDELKNSLKDFLSSDYEIGIITRRTFYMGDFL
HHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHH
KHIWNDEKLIRVFKKDVCKYSGDLHEKVICNHHKYYELKGYLNHYSFKNLKDQFERTLKY
HHHHCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH
AKTSADIMCKNNKPFHVYNLILNPFWIFFKFFILKAGYKEGTKGLIIAFSGMFYVFMKYA
HCCCCCEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHH
FLYECQKSKEKELWK
HHHHHHHHHHCCCCC
>Mature Secondary Structure
MQRRKISFVILTKNEEKNIKRAIDSIKDVADEILVIDSGSTDKTIDIAKSCGAKVIFNEW
CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHCCCHHHHHHH
ISYAAQKNFGISKAKNDIVFILDADEELSDELKNSLKDFLSSDYEIGIITRRTFYMGDFL
HHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHH
KHIWNDEKLIRVFKKDVCKYSGDLHEKVICNHHKYYELKGYLNHYSFKNLKDQFERTLKY
HHHHCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH
AKTSADIMCKNNKPFHVYNLILNPFWIFFKFFILKAGYKEGTKGLIIAFSGMFYVFMKYA
HCCCCCEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHH
FLYECQKSKEKELWK
HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA