| Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
|---|---|
| Accession | NC_011126 |
| Length | 1,559,514 |
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The map label for this gene is 195952963
Identifier: 195952963
GI number: 195952963
Start: 524887
End: 525654
Strand: Direct
Name: 195952963
Synonym: HY04AAS1_0588
Alternate gene names: NA
Gene position: 524887-525654 (Clockwise)
Preceding gene: 195952962
Following gene: 195952972
Centisome position: 33.66
GC content: 30.08
Gene sequence:
>768_bases ATGCAAAGACGTAAAATATCTTTTGTAATTCTTACAAAAAACGAAGAAAAAAACATAAAAAGAGCCATAGATAGCATAAA AGATGTAGCAGATGAGATACTTGTAATAGATTCAGGTTCTACAGACAAAACCATAGATATTGCAAAATCATGCGGAGCCA AAGTCATATTTAACGAATGGATAAGCTATGCGGCCCAGAAGAACTTTGGTATATCAAAAGCCAAAAACGATATTGTTTTT ATCTTAGATGCCGATGAAGAACTATCGGATGAGCTTAAAAACTCTTTAAAAGATTTTTTATCATCAGATTATGAGATAGG TATAATAACAAGACGTACATTTTACATGGGAGATTTTTTAAAACATATATGGAACGATGAAAAGCTTATAAGAGTTTTTA AAAAAGATGTTTGTAAATATAGCGGTGATCTTCACGAAAAGGTCATATGCAATCACCACAAATATTATGAGCTAAAAGGC TATTTAAACCACTATTCTTTTAAAAACCTAAAAGATCAGTTTGAAAGAACATTAAAATACGCAAAAACAAGCGCCGATAT CATGTGTAAAAACAATAAGCCCTTTCATGTTTACAATCTTATCCTAAACCCCTTTTGGATCTTTTTTAAATTTTTTATAT TAAAAGCCGGATATAAAGAAGGCACAAAAGGACTTATCATAGCTTTTTCTGGTATGTTTTATGTGTTTATGAAATACGCT TTTTTATACGAATGCCAAAAATCCAAAGAAAAAGAGCTTTGGAAATAA
Upstream 100 bases:
>100_bases ATACCATCAAAAGAAGAGCTTTTTGATAGACTTGATGAGCTAAAAGATAGCGTTATTGTGTTTATGGGGGCTGGTTCTAT AGGCCAATGGTCTCATGAAT
Downstream 100 bases:
>100_bases ATTCACTTACCAAATATGCTTTTTACAATGCCAAAGATAGATTTGTTGTTTTCTTCTTGGTCTAATTTTCTTAGTTCTTC TATTAGTTTTTGCTGTTTTT
Product: family 2 glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MQRRKISFVILTKNEEKNIKRAIDSIKDVADEILVIDSGSTDKTIDIAKSCGAKVIFNEWISYAAQKNFGISKAKNDIVF ILDADEELSDELKNSLKDFLSSDYEIGIITRRTFYMGDFLKHIWNDEKLIRVFKKDVCKYSGDLHEKVICNHHKYYELKG YLNHYSFKNLKDQFERTLKYAKTSADIMCKNNKPFHVYNLILNPFWIFFKFFILKAGYKEGTKGLIIAFSGMFYVFMKYA FLYECQKSKEKELWK
Sequences:
>Translated_255_residues MQRRKISFVILTKNEEKNIKRAIDSIKDVADEILVIDSGSTDKTIDIAKSCGAKVIFNEWISYAAQKNFGISKAKNDIVF ILDADEELSDELKNSLKDFLSSDYEIGIITRRTFYMGDFLKHIWNDEKLIRVFKKDVCKYSGDLHEKVICNHHKYYELKG YLNHYSFKNLKDQFERTLKYAKTSADIMCKNNKPFHVYNLILNPFWIFFKFFILKAGYKEGTKGLIIAFSGMFYVFMKYA FLYECQKSKEKELWK >Mature_255_residues MQRRKISFVILTKNEEKNIKRAIDSIKDVADEILVIDSGSTDKTIDIAKSCGAKVIFNEWISYAAQKNFGISKAKNDIVF ILDADEELSDELKNSLKDFLSSDYEIGIITRRTFYMGDFLKHIWNDEKLIRVFKKDVCKYSGDLHEKVICNHHKYYELKG YLNHYSFKNLKDQFERTLKYAKTSADIMCKNNKPFHVYNLILNPFWIFFKFFILKAGYKEGTKGLIIAFSGMFYVFMKYA FLYECQKSKEKELWK
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family. WaaE/kdtX subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 30085; Mature: 30085
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRRKISFVILTKNEEKNIKRAIDSIKDVADEILVIDSGSTDKTIDIAKSCGAKVIFNEW CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHCCCHHHHHHH ISYAAQKNFGISKAKNDIVFILDADEELSDELKNSLKDFLSSDYEIGIITRRTFYMGDFL HHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHH KHIWNDEKLIRVFKKDVCKYSGDLHEKVICNHHKYYELKGYLNHYSFKNLKDQFERTLKY HHHHCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH AKTSADIMCKNNKPFHVYNLILNPFWIFFKFFILKAGYKEGTKGLIIAFSGMFYVFMKYA HCCCCCEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHH FLYECQKSKEKELWK HHHHHHHHHHCCCCC >Mature Secondary Structure MQRRKISFVILTKNEEKNIKRAIDSIKDVADEILVIDSGSTDKTIDIAKSCGAKVIFNEW CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHCCCHHHHHHH ISYAAQKNFGISKAKNDIVFILDADEELSDELKNSLKDFLSSDYEIGIITRRTFYMGDFL HHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHH KHIWNDEKLIRVFKKDVCKYSGDLHEKVICNHHKYYELKGYLNHYSFKNLKDQFERTLKY HHHHCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH AKTSADIMCKNNKPFHVYNLILNPFWIFFKFFILKAGYKEGTKGLIIAFSGMFYVFMKYA HCCCCCEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHH FLYECQKSKEKELWK HHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA