| Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
|---|---|
| Accession | NC_011126 |
| Length | 1,559,514 |
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The map label for this gene is kbl [C]
Identifier: 195952913
GI number: 195952913
Start: 472112
End: 473230
Strand: Direct
Name: kbl [C]
Synonym: HY04AAS1_0538
Alternate gene names: 195952913
Gene position: 472112-473230 (Clockwise)
Preceding gene: 195952900
Following gene: 195952914
Centisome position: 30.27
GC content: 30.47
Gene sequence:
>1119_bases ATGAACTTTGAAGAAGAATTAGAATATATTAAAAGCCAAAAACTATACAGGAAAAGAGAAATTATAAAAGATAAAAAAAT ATTTTGTTCAAACGATTATCTTGGTATGTCTAAAAATAAAGAAGTAATAGATTATATCGTAGAAAAACTAAGGGAAGTAA ATACTATAGGTGCTACTGCTTCAAGCCTTGTAAATGGATATACAAAATACCATAAAGAGCTAGAGCTTCTACTTAGTAAG TTAAAATCCAAAGAGGATTGCATAGTTTTTCCCTCTGGATACTCTACAAACATAGGACTTTTTCAAGCGCTTGGAAATGA AGAAGATGTTTTTTACAGCGATGAATTAAACCATGCATCAATAATAGACGGGATAAGGCTATCAAAAGCTTCAAAATATA TTTATCAACACAACAACATAAAGCATCTTTTTGAGCTTTTAAAAGCTACAAGACAAAAATATAGAAGGGCTTATATAGTA TCTGACTCTGTGTTTAGCATGGAAGGAGATTTAGCAAGGTTAAAAGAGTTAATAGATATTTCGAAAGAGTTTGAAGCCTA TCTTATTCTTGATGAAGCACATGCCACCGGCACTATAGGAAAAGGTATATATGATTATTTTGGGCTTTTACCAGAAGAAA ATACGATTATAATGGGCACTTTATCAAAAGCAATAGGCTCTCAAGGTGGATTTGTTTGTGCAAAAAAATTAATCATAGAG TACATAGCAAACAAAGCGAGATCTTACATATTTTCTACCGCTTTAGGACTTCCAATGGTTTTTGCCTCTATAAAAGCCTT AGAACTTATTGAAAAAAATCTAAACAAATATAAAGAAGAGTTACAACAAAGAACAAAATTTATATTAGATATGATAAAAG AATTCAATTTTCAACCAAAAGAAGACTTTATCACACCTATAATACCAATAAAAGTAGGTAAAGAAGATGAAGCTCTAAAA CTAAGAAATAAATTGTTAGAAAATGGCGTATTTATACAAGCTATCAGATACCCAACAGTACCAAAAAACAAAGCCATTCT AAGGTTAACTGCATCGCTATCTTATTCCAGCGAGGACTTAGAGGTTCTTTATGAAGCTTTTAAAAGCTTGAAAAATTAA
Upstream 100 bases:
>100_bases ACAATTCCTACACCAAGTTATTTCTGCCCCCGTATATAAGCTTTTAGTAATCATAATAAAATAAATTATATCACTTTTTA AAAGTTTGTATAATACATTT
Downstream 100 bases:
>100_bases AGTATCTTCATGTATTTTTCATCAAAAATTAATAAAATATTAACATTAAAAGCGTATATTTAAGATATACTTGAAAGGAG GTAAGTGTATGAAGTTAAGA
Product: 8-amino-7-oxononanoate synthase
Products: NA
Alternate protein names: AONS/AKB ligase; 7-keto-8-amino-pelargonic acid synthase; 7-KAP synthase; KAPA synthase; 8-amino-7-ketopelargonate synthase; Alpha-oxoamine synthase; L-alanine--pimeloyl-CoA ligase [H]
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MNFEEELEYIKSQKLYRKREIIKDKKIFCSNDYLGMSKNKEVIDYIVEKLREVNTIGATASSLVNGYTKYHKELELLLSK LKSKEDCIVFPSGYSTNIGLFQALGNEEDVFYSDELNHASIIDGIRLSKASKYIYQHNNIKHLFELLKATRQKYRRAYIV SDSVFSMEGDLARLKELIDISKEFEAYLILDEAHATGTIGKGIYDYFGLLPEENTIIMGTLSKAIGSQGGFVCAKKLIIE YIANKARSYIFSTALGLPMVFASIKALELIEKNLNKYKEELQQRTKFILDMIKEFNFQPKEDFITPIIPIKVGKEDEALK LRNKLLENGVFIQAIRYPTVPKNKAILRLTASLSYSSEDLEVLYEAFKSLKN
Sequences:
>Translated_372_residues MNFEEELEYIKSQKLYRKREIIKDKKIFCSNDYLGMSKNKEVIDYIVEKLREVNTIGATASSLVNGYTKYHKELELLLSK LKSKEDCIVFPSGYSTNIGLFQALGNEEDVFYSDELNHASIIDGIRLSKASKYIYQHNNIKHLFELLKATRQKYRRAYIV SDSVFSMEGDLARLKELIDISKEFEAYLILDEAHATGTIGKGIYDYFGLLPEENTIIMGTLSKAIGSQGGFVCAKKLIIE YIANKARSYIFSTALGLPMVFASIKALELIEKNLNKYKEELQQRTKFILDMIKEFNFQPKEDFITPIIPIKVGKEDEALK LRNKLLENGVFIQAIRYPTVPKNKAILRLTASLSYSSEDLEVLYEAFKSLKN >Mature_372_residues MNFEEELEYIKSQKLYRKREIIKDKKIFCSNDYLGMSKNKEVIDYIVEKLREVNTIGATASSLVNGYTKYHKELELLLSK LKSKEDCIVFPSGYSTNIGLFQALGNEEDVFYSDELNHASIIDGIRLSKASKYIYQHNNIKHLFELLKATRQKYRRAYIV SDSVFSMEGDLARLKELIDISKEFEAYLILDEAHATGTIGKGIYDYFGLLPEENTIIMGTLSKAIGSQGGFVCAKKLIIE YIANKARSYIFSTALGLPMVFASIKALELIEKNLNKYKEELQQRTKFILDMIKEFNFQPKEDFITPIIPIKVGKEDEALK LRNKLLENGVFIQAIRYPTVPKNKAILRLTASLSYSSEDLEVLYEAFKSLKN
Specific function: Catalyzes the decarboxylative condensation of pimeloyl- CoA and L-alanine to produce 8-amino-7-oxononanoate (AON), coenzyme A and/or converts 2-amino-3-ketobutyrate to glycine and acetyl-CoA [H]
COG id: COG0156
COG function: function code H; 7-keto-8-aminopelargonate synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI7657118, Length=383, Percent_Identity=33.9425587467363, Blast_Score=225, Evalue=5e-59, Organism=Homo sapiens, GI284448556, Length=344, Percent_Identity=36.046511627907, Blast_Score=221, Evalue=7e-58, Organism=Homo sapiens, GI83977442, Length=353, Percent_Identity=34.2776203966006, Blast_Score=189, Evalue=4e-48, Organism=Homo sapiens, GI83977444, Length=353, Percent_Identity=34.2776203966006, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI83977440, Length=353, Percent_Identity=34.2776203966006, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI4502025, Length=355, Percent_Identity=32.112676056338, Blast_Score=177, Evalue=1e-44, Organism=Homo sapiens, GI40316939, Length=355, Percent_Identity=32.112676056338, Blast_Score=177, Evalue=1e-44, Organism=Homo sapiens, GI4758668, Length=358, Percent_Identity=30.4469273743017, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI119220554, Length=369, Percent_Identity=27.9132791327913, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI5454084, Length=240, Percent_Identity=23.3333333333333, Blast_Score=89, Evalue=7e-18, Organism=Escherichia coli, GI1790046, Length=384, Percent_Identity=31.7708333333333, Blast_Score=207, Evalue=7e-55, Organism=Escherichia coli, GI1786993, Length=351, Percent_Identity=27.6353276353276, Blast_Score=149, Evalue=4e-37, Organism=Caenorhabditis elegans, GI71994529, Length=390, Percent_Identity=33.3333333333333, Blast_Score=208, Evalue=4e-54, Organism=Caenorhabditis elegans, GI32566772, Length=357, Percent_Identity=26.0504201680672, Blast_Score=152, Evalue=3e-37, Organism=Caenorhabditis elegans, GI17560914, Length=316, Percent_Identity=25.6329113924051, Blast_Score=135, Evalue=3e-32, Organism=Caenorhabditis elegans, GI17560912, Length=316, Percent_Identity=25.6329113924051, Blast_Score=135, Evalue=3e-32, Organism=Caenorhabditis elegans, GI71982617, Length=233, Percent_Identity=24.0343347639485, Blast_Score=91, Evalue=8e-19, Organism=Caenorhabditis elegans, GI71982625, Length=233, Percent_Identity=24.0343347639485, Blast_Score=91, Evalue=9e-19, Organism=Saccharomyces cerevisiae, GI6320267, Length=351, Percent_Identity=27.6353276353276, Blast_Score=160, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6320438, Length=384, Percent_Identity=29.1666666666667, Blast_Score=159, Evalue=6e-40, Organism=Saccharomyces cerevisiae, GI6323954, Length=275, Percent_Identity=24, Blast_Score=91, Evalue=3e-19, Organism=Drosophila melanogaster, GI24662918, Length=359, Percent_Identity=32.8690807799443, Blast_Score=205, Evalue=4e-53, Organism=Drosophila melanogaster, GI17137420, Length=375, Percent_Identity=31.7333333333333, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI17136286, Length=324, Percent_Identity=28.0864197530864, Blast_Score=149, Evalue=2e-36, Organism=Drosophila melanogaster, GI24653280, Length=371, Percent_Identity=22.6415094339623, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI24653276, Length=371, Percent_Identity=22.6415094339623, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI24653278, Length=371, Percent_Identity=22.6415094339623, Blast_Score=99, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR004723 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.3.1.29; =2.3.1.47 [H]
Molecular weight: Translated: 42660; Mature: 42660
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFEEELEYIKSQKLYRKREIIKDKKIFCSNDYLGMSKNKEVIDYIVEKLREVNTIGATA CCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH SSLVNGYTKYHKELELLLSKLKSKEDCIVFPSGYSTNIGLFQALGNEEDVFYSDELNHAS HHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHCCCCCCEEECCCCCCHH IIDGIRLSKASKYIYQHNNIKHLFELLKATRQKYRRAYIVSDSVFSMEGDLARLKELIDI HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCHHCCCCCHHHHHHHHHH SKEFEAYLILDEAHATGTIGKGIYDYFGLLPEENTIIMGTLSKAIGSQGGFVCAKKLIIE HHCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEEHHHHHCCCCCHHHHHHHHHH YIANKARSYIFSTALGLPMVFASIKALELIEKNLNKYKEELQQRTKFILDMIKEFNFQPK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EDFITPIIPIKVGKEDEALKLRNKLLENGVFIQAIRYPTVPKNKAILRLTASLSYSSEDL HHCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEEECCCCCHHH EVLYEAFKSLKN HHHHHHHHHHCC >Mature Secondary Structure MNFEEELEYIKSQKLYRKREIIKDKKIFCSNDYLGMSKNKEVIDYIVEKLREVNTIGATA CCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH SSLVNGYTKYHKELELLLSKLKSKEDCIVFPSGYSTNIGLFQALGNEEDVFYSDELNHAS HHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHCCCCCCEEECCCCCCHH IIDGIRLSKASKYIYQHNNIKHLFELLKATRQKYRRAYIVSDSVFSMEGDLARLKELIDI HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCHHCCCCCHHHHHHHHHH SKEFEAYLILDEAHATGTIGKGIYDYFGLLPEENTIIMGTLSKAIGSQGGFVCAKKLIIE HHCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEEHHHHHCCCCCHHHHHHHHHH YIANKARSYIFSTALGLPMVFASIKALELIEKNLNKYKEELQQRTKFILDMIKEFNFQPK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EDFITPIIPIKVGKEDEALKLRNKLLENGVFIQAIRYPTVPKNKAILRLTASLSYSSEDL HHCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEEECCCCCHHH EVLYEAFKSLKN HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]