| Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
|---|---|
| Accession | NC_011126 |
| Length | 1,559,514 |
Click here to switch to the map view.
The map label for this gene is 195952755
Identifier: 195952755
GI number: 195952755
Start: 332255
End: 332695
Strand: Direct
Name: 195952755
Synonym: HY04AAS1_0377
Alternate gene names: NA
Gene position: 332255-332695 (Clockwise)
Preceding gene: 195952754
Following gene: 195952756
Centisome position: 21.31
GC content: 25.85
Gene sequence:
>441_bases ATGATTGGTAAGCGTTTTATTGTTTGGTTTTTTGTGCTTTTTATATTGGAATTCTTCTTTTTAGAAGGAAATGGCTTGTA TCCATTTCCAGAAGCATTTTTATCTTTGATATTCTTAAATTTAGAAAATGGGTATATTCCGCTTTGGTCATTTTTAATGG GTATTTTAATGGATCTTAGCGTAAATACGTTGGGAGTTTTTACCTTTAGTTATACGTTTTATAGTGTAATAATAAGACTT TTGCTTAGCTATACTTTAGAAACCGGTTTTTTAAAATTACCCATGTTTTTTATTTTTGATCTACTTGTAAAGCTAACAAA CGTTGGTATTGTTTATATGAAGTACCATTATATTGATTTTGGATTTTTAAGTTTTTTCATGTCAATTTTTATAGATTGTA TAATATTTTTTGTGTTAGATAGGTTTTATAAAAATGTATGA
Upstream 100 bases:
>100_bases TTTTAGAGGTTAGTAGATCAAAAAATTTATTTTTTTTAAACGTCAAATTAAAACCTATGGCCAATCCTAACATATACGAT TTTGTGGTGGTAATTAATAG
Downstream 100 bases:
>100_bases AGAAAAATTACATTGTTTTTGCGCTTTTAATATTATTAGCTTATATTGCAATAGGTGCTAGATTATTTTATTTACAGATA ATAAAAGGAGATAAGTATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MIGKRFIVWFFVLFILEFFFLEGNGLYPFPEAFLSLIFLNLENGYIPLWSFLMGILMDLSVNTLGVFTFSYTFYSVIIRL LLSYTLETGFLKLPMFFIFDLLVKLTNVGIVYMKYHYIDFGFLSFFMSIFIDCIIFFVLDRFYKNV
Sequences:
>Translated_146_residues MIGKRFIVWFFVLFILEFFFLEGNGLYPFPEAFLSLIFLNLENGYIPLWSFLMGILMDLSVNTLGVFTFSYTFYSVIIRL LLSYTLETGFLKLPMFFIFDLLVKLTNVGIVYMKYHYIDFGFLSFFMSIFIDCIIFFVLDRFYKNV >Mature_146_residues MIGKRFIVWFFVLFILEFFFLEGNGLYPFPEAFLSLIFLNLENGYIPLWSFLMGILMDLSVNTLGVFTFSYTFYSVIIRL LLSYTLETGFLKLPMFFIFDLLVKLTNVGIVYMKYHYIDFGFLSFFMSIFIDCIIFFVLDRFYKNV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17409; Mature: 17409
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGKRFIVWFFVLFILEFFFLEGNGLYPFPEAFLSLIFLNLENGYIPLWSFLMGILMDLS CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC VNTLGVFTFSYTFYSVIIRLLLSYTLETGFLKLPMFFIFDLLVKLTNVGIVYMKYHYIDF CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHH GFLSFFMSIFIDCIIFFVLDRFYKNV HHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIGKRFIVWFFVLFILEFFFLEGNGLYPFPEAFLSLIFLNLENGYIPLWSFLMGILMDLS CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC VNTLGVFTFSYTFYSVIIRLLLSYTLETGFLKLPMFFIFDLLVKLTNVGIVYMKYHYIDF CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHH GFLSFFMSIFIDCIIFFVLDRFYKNV HHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA