| Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
|---|---|
| Accession | NC_011126 |
| Length | 1,559,514 |
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The map label for this gene is 195952752
Identifier: 195952752
GI number: 195952752
Start: 329492
End: 330463
Strand: Direct
Name: 195952752
Synonym: HY04AAS1_0374
Alternate gene names: NA
Gene position: 329492-330463 (Clockwise)
Preceding gene: 195952751
Following gene: 195952753
Centisome position: 21.13
GC content: 33.44
Gene sequence:
>972_bases ATGAAAGAAAAGTTTAGGGGTATTGTTCTTGGGTCTGCGATAGGAGACGCTATAGGAAAATCTTTTGAGGATTTAGATAT TTATCAGGTAGAAGAGTTTTATAAGGATTTACCTATAACAAACTTCGTAGAACCACATCCTAGCTCTCCGGCGTTTTTCC AAAAGCCAAATGAACCTTCAGATGAAACTAATGTGTCAAGGCTTTTGATAGAATCTATATTGGAATCTAACAAGCTTGAT ATTTATAACTATTTTGATAAGCTTAAAGCTTGGGCTTTTGATGAGACAACGCACAGATATCCAGATCCATTTATACTAAA AGCCATATACAATTTGTCAAATAACATAATAGAAGGCTTGCGATTTTCTTCTGTAGAAGGAATACTTAGGGTTATAGCCA CTTCTATGCTTCACTTTGAAAATGAAGCCCTATCCGATGAAGCGGCTAAGTTGGTTACAATGCTTACTCATAGAAGCGAT GAGGCTTTAGATGGTGCTATTTTGTTTAATCGCTTTTTGGTAAAATCCATAAAAAACGATGAATCTTTGGAGACTTTAGA AAATAGAATAGAGCTTTTAAAAGAGTTAAAATCTTGTGTTAAAAGCTTTTATACAAAAAAAATGTTAGATATTTTGATAG ATGCTTTAGAAGAAGGATATTCTAAAGAAAAAGCCATTGTAAACATAGGTAATGGTAATTTTGTATTGGAAAGCTTAGGG TTGTCTTTGTATTACTTTCTAACGGAAGGCATTGACTATCCGTTTGATGCTTTTGTTAGTGCTATAAACTCCTATTGGGA GTTTGGCGGTGATACAGACGCTATAGGTTTTATTACAGGAGCTTTGTTGGGTGCTTACCACGGATATGAGTTTTTACCAG AGGATTTGATACAAAATTTAGAAAACCATCAACAATATATACATTTAGCAGATAACCTTTATGAGCTTAGTAAAAAAATT CATGCAAAATAG
Upstream 100 bases:
>100_bases TTCACCATATAGCAGAGTGTAGTATAAAGTCTTTAGCTTTTAGTGTAAGACAAGCTGTAGCAAAACAAGATAAAGGCATC CTTTCTACAAAAGGGCTTTT
Downstream 100 bases:
>100_bases GTTAAAATATTAGTATGTTTGGATTCATGAATAGTGCAATAGGTATTGATTTGGGTACGGCTAACAGTTTGGTATTTGTT CCAGGACGAGGCATTGTATT
Product: ADP-ribosylation/Crystallin J1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MKEKFRGIVLGSAIGDAIGKSFEDLDIYQVEEFYKDLPITNFVEPHPSSPAFFQKPNEPSDETNVSRLLIESILESNKLD IYNYFDKLKAWAFDETTHRYPDPFILKAIYNLSNNIIEGLRFSSVEGILRVIATSMLHFENEALSDEAAKLVTMLTHRSD EALDGAILFNRFLVKSIKNDESLETLENRIELLKELKSCVKSFYTKKMLDILIDALEEGYSKEKAIVNIGNGNFVLESLG LSLYYFLTEGIDYPFDAFVSAINSYWEFGGDTDAIGFITGALLGAYHGYEFLPEDLIQNLENHQQYIHLADNLYELSKKI HAK
Sequences:
>Translated_323_residues MKEKFRGIVLGSAIGDAIGKSFEDLDIYQVEEFYKDLPITNFVEPHPSSPAFFQKPNEPSDETNVSRLLIESILESNKLD IYNYFDKLKAWAFDETTHRYPDPFILKAIYNLSNNIIEGLRFSSVEGILRVIATSMLHFENEALSDEAAKLVTMLTHRSD EALDGAILFNRFLVKSIKNDESLETLENRIELLKELKSCVKSFYTKKMLDILIDALEEGYSKEKAIVNIGNGNFVLESLG LSLYYFLTEGIDYPFDAFVSAINSYWEFGGDTDAIGFITGALLGAYHGYEFLPEDLIQNLENHQQYIHLADNLYELSKKI HAK >Mature_323_residues MKEKFRGIVLGSAIGDAIGKSFEDLDIYQVEEFYKDLPITNFVEPHPSSPAFFQKPNEPSDETNVSRLLIESILESNKLD IYNYFDKLKAWAFDETTHRYPDPFILKAIYNLSNNIIEGLRFSSVEGILRVIATSMLHFENEALSDEAAKLVTMLTHRSD EALDGAILFNRFLVKSIKNDESLETLENRIELLKELKSCVKSFYTKKMLDILIDALEEGYSKEKAIVNIGNGNFVLESLG LSLYYFLTEGIDYPFDAFVSAINSYWEFGGDTDAIGFITGALLGAYHGYEFLPEDLIQNLENHQQYIHLADNLYELSKKI HAK
Specific function: Unknown
COG id: COG1397
COG function: function code O; ADP-ribosylglycohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ADP-ribosylglycohydrolase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005502 [H]
Pfam domain/function: PF03747 ADP_ribosyl_GH [H]
EC number: NA
Molecular weight: Translated: 36793; Mature: 36793
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEKFRGIVLGSAIGDAIGKSFEDLDIYQVEEFYKDLPITNFVEPHPSSPAFFQKPNEPS CCCHHHHEEHHHHHHHHHCCCCHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC DETNVSRLLIESILESNKLDIYNYFDKLKAWAFDETTHRYPDPFILKAIYNLSNNIIEGL CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH RFSSVEGILRVIATSMLHFENEALSDEAAKLVTMLTHRSDEALDGAILFNRFLVKSIKND HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC ESLETLENRIELLKELKSCVKSFYTKKMLDILIDALEEGYSKEKAIVNIGNGNFVLESLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHH LSLYYFLTEGIDYPFDAFVSAINSYWEFGGDTDAIGFITGALLGAYHGYEFLPEDLIQNL HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH ENHQQYIHLADNLYELSKKIHAK HHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKEKFRGIVLGSAIGDAIGKSFEDLDIYQVEEFYKDLPITNFVEPHPSSPAFFQKPNEPS CCCHHHHEEHHHHHHHHHCCCCHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC DETNVSRLLIESILESNKLDIYNYFDKLKAWAFDETTHRYPDPFILKAIYNLSNNIIEGL CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH RFSSVEGILRVIATSMLHFENEALSDEAAKLVTMLTHRSDEALDGAILFNRFLVKSIKND HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC ESLETLENRIELLKELKSCVKSFYTKKMLDILIDALEEGYSKEKAIVNIGNGNFVLESLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHH LSLYYFLTEGIDYPFDAFVSAINSYWEFGGDTDAIGFITGALLGAYHGYEFLPEDLIQNL HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH ENHQQYIHLADNLYELSKKIHAK HHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]