| Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
|---|---|
| Accession | NC_011126 |
| Length | 1,559,514 |
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The map label for this gene is hisB
Identifier: 195952751
GI number: 195952751
Start: 328917
End: 329495
Strand: Direct
Name: hisB
Synonym: HY04AAS1_0373
Alternate gene names: 195952751
Gene position: 328917-329495 (Clockwise)
Preceding gene: 195952750
Following gene: 195952752
Centisome position: 21.09
GC content: 34.89
Gene sequence:
>579_bases ATGAGAAAGGCACATATTTTTAGACAGACAAAAGAAACGGCTATAGATATGGAGATTGACCTAGATGGTTCTGGTGTTTA TCAAATAGAGACACCTGTAGGTTTTTTAAATCATATGATGGAGAGTTTTTCGAAGCATAGCTTTATAGACATAAAGTTAA AAGCCGAAGGCGATATCGATGTATCTTACCATCATCTTGTGGAAGATGTAGGTATAGTACTAGGACAAGCTATATCTAAA GCCTTAGGAGATAAATCTGGTATAAATAGATATGGATTTGCAATTTTACCTATGGACGAAGCTTTGGTGCTATGTTCTCT TGATTTTTCAGGTAGAGGACTCTTTTTCTACGATAGAAAAGATTTAAGAGGTAAGATTACAGAGTTTGACTTTGAGCTAA TATGGGAGTTTATAAAAGGGTTTGCATTGGAGTCAAAAGCTACTGTGCATATAAAAATTCTTGATGGGCACATACTTCAC CATATAGCAGAGTGTAGTATAAAGTCTTTAGCTTTTAGTGTAAGACAAGCTGTAGCAAAACAAGATAAAGGCATCCTTTC TACAAAAGGGCTTTTATGA
Upstream 100 bases:
>100_bases TAGGTAGGACGTTGGTGGCTATTATGGAAAATTATCAAACGAAAGATCACAAAATTAGAATACCAAAGGTTTTAAAAGAT TACATAAAGGGAGAGTGTAT
Downstream 100 bases:
>100_bases AAGAAAAGTTTAGGGGTATTGTTCTTGGGTCTGCGATAGGAGACGCTATAGGAAAATCTTTTGAGGATTTAGATATTTAT CAGGTAGAAGAGTTTTATAA
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MRKAHIFRQTKETAIDMEIDLDGSGVYQIETPVGFLNHMMESFSKHSFIDIKLKAEGDIDVSYHHLVEDVGIVLGQAISK ALGDKSGINRYGFAILPMDEALVLCSLDFSGRGLFFYDRKDLRGKITEFDFELIWEFIKGFALESKATVHIKILDGHILH HIAECSIKSLAFSVRQAVAKQDKGILSTKGLL
Sequences:
>Translated_192_residues MRKAHIFRQTKETAIDMEIDLDGSGVYQIETPVGFLNHMMESFSKHSFIDIKLKAEGDIDVSYHHLVEDVGIVLGQAISK ALGDKSGINRYGFAILPMDEALVLCSLDFSGRGLFFYDRKDLRGKITEFDFELIWEFIKGFALESKATVHIKILDGHILH HIAECSIKSLAFSVRQAVAKQDKGILSTKGLL >Mature_192_residues MRKAHIFRQTKETAIDMEIDLDGSGVYQIETPVGFLNHMMESFSKHSFIDIKLKAEGDIDVSYHHLVEDVGIVLGQAISK ALGDKSGINRYGFAILPMDEALVLCSLDFSGRGLFFYDRKDLRGKITEFDFELIWEFIKGFALESKATVHIKILDGHILH HIAECSIKSLAFSVRQAVAKQDKGILSTKGLL
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family
Homologues:
Organism=Escherichia coli, GI87082027, Length=191, Percent_Identity=38.2198952879581, Blast_Score=137, Evalue=7e-34, Organism=Saccharomyces cerevisiae, GI6324776, Length=216, Percent_Identity=33.3333333333333, Blast_Score=118, Evalue=6e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS7_HYDS0 (B4U7F2)
Other databases:
- EMBL: CP001130 - RefSeq: YP_002121041.1 - ProteinModelPortal: B4U7F2 - SMR: B4U7F2 - GeneID: 6743167 - GenomeReviews: CP001130_GR - KEGG: hya:HY04AAS1_0373 - HOGENOM: HBG289010 - OMA: FGWAIIP - ProtClustDB: PRK00951 - GO: GO:0005737 - HAMAP: MF_00076 - InterPro: IPR000807 - InterPro: IPR020568
Pfam domain/function: PF00475 IGPD; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: =4.2.1.19
Molecular weight: Translated: 21530; Mature: 21530
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: PS00954 IGP_DEHYDRATASE_1; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKAHIFRQTKETAIDMEIDLDGSGVYQIETPVGFLNHMMESFSKHSFIDIKLKAEGDID CCCCHHHHHCCCCEEEEEEEECCCCEEEEECCHHHHHHHHHHHCCCCEEEEEEEECCCCC VSYHHLVEDVGIVLGQAISKALGDKSGINRYGFAILPMDEALVLCSLDFSGRGLFFYDRK HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCEEEEECCCEEEEEEECCCCCEEEEEECC DLRGKITEFDFELIWEFIKGFALESKATVHIKILDGHILHHIAECSIKSLAFSVRQAVAK CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH QDKGILSTKGLL HCCCCCCCCCCC >Mature Secondary Structure MRKAHIFRQTKETAIDMEIDLDGSGVYQIETPVGFLNHMMESFSKHSFIDIKLKAEGDID CCCCHHHHHCCCCEEEEEEEECCCCEEEEECCHHHHHHHHHHHCCCCEEEEEEEECCCCC VSYHHLVEDVGIVLGQAISKALGDKSGINRYGFAILPMDEALVLCSLDFSGRGLFFYDRK HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCEEEEECCCEEEEEEECCCCCEEEEEECC DLRGKITEFDFELIWEFIKGFALESKATVHIKILDGHILHHIAECSIKSLAFSVRQAVAK CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH QDKGILSTKGLL HCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA