| Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
|---|---|
| Accession | NC_011126 |
| Length | 1,559,514 |
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The map label for this gene is sumT [H]
Identifier: 195952721
GI number: 195952721
Start: 302467
End: 303213
Strand: Direct
Name: sumT [H]
Synonym: HY04AAS1_0343
Alternate gene names: 195952721
Gene position: 302467-303213 (Clockwise)
Preceding gene: 195952720
Following gene: 195952722
Centisome position: 19.39
GC content: 37.35
Gene sequence:
>747_bases ATGGGTAAAGTATATTTAGTGGGTGCTGGTCCCGGTGATCCTGAGCTACTTACTCTAAAAGCAATAAAAGCCCTTGAGCG ATCTGATGTTGTGTTGTATGACAAGCTTGTAAACAAAGATATACTATCTTATGCGAAAAAAGAGGCAATAAAAATATGCG TTGGAAAAGAAAGAGGATTTCATTCTATAGAACAAGATAATATAAACGATCTTATCTTGGAATACGCACATTTAGGATAC GATGTAACAAGGCTTAAAAGCGGCGATCCTTTTGTATTTGGAAGAGGTGGAGAGGAGGCTTTGTTTCTTAAAAATCATGG TGTAGAGTTTGAGGTGATACCTGGAGTCACATCTGCCGTTGGTTTACCTACTCATGCGTATATCCCTATTACCTACAGAG GGATATCATCTTCCTTCGCTGTTATAACGGGACATAAAGAAAATGGTAGTCTAAAGCATATAAATTGGGATAAGATAGTT GGCGTAGATACGCTTGTTTTTTTAATGGCTGTCTCTTCAAGACAGGAGATAGCAAAGCACCTTATAGATGCAGGAAGAGA TCCGAATGAGCCAGTTGCGTTTGTAGAAAATGGTTTTAGTCAAAACGAAAAAATAATAATAACCAATTTAAAAGACTTAC TACACAACAATATAGAAGTAAATACCCCTGCTGTGATGATAGTAGGTCAGGTGGTAAACATGAGAGATAAATTAAGATCC ATGGAGGTGGCTTTATGCAAGTGTTAA
Upstream 100 bases:
>100_bases GTAAAAATCCTTGATACTTCAGATTTTAAAATAATAAAAGAGATAACCGTACCTCAACCCTCAGGTATCTTCAGATTACC AGAAAGACTGGAGGAGTGTC
Downstream 100 bases:
>100_bases AACAAAAATTAATTGATGTAATCCAGCAAGATATACCCATACAAGAAAACCCTTTTCAGTGGATAGCCGAACAGCTTAAT ACGGATTTAGACAATGTTTT
Product: uroporphyrin-III C-methyltransferase
Products: NA
Alternate protein names: Urogen III methylase; SUMT; Uroporphyrinogen III methylase; UROM [H]
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MGKVYLVGAGPGDPELLTLKAIKALERSDVVLYDKLVNKDILSYAKKEAIKICVGKERGFHSIEQDNINDLILEYAHLGY DVTRLKSGDPFVFGRGGEEALFLKNHGVEFEVIPGVTSAVGLPTHAYIPITYRGISSSFAVITGHKENGSLKHINWDKIV GVDTLVFLMAVSSRQEIAKHLIDAGRDPNEPVAFVENGFSQNEKIIITNLKDLLHNNIEVNTPAVMIVGQVVNMRDKLRS MEVALCKC
Sequences:
>Translated_248_residues MGKVYLVGAGPGDPELLTLKAIKALERSDVVLYDKLVNKDILSYAKKEAIKICVGKERGFHSIEQDNINDLILEYAHLGY DVTRLKSGDPFVFGRGGEEALFLKNHGVEFEVIPGVTSAVGLPTHAYIPITYRGISSSFAVITGHKENGSLKHINWDKIV GVDTLVFLMAVSSRQEIAKHLIDAGRDPNEPVAFVENGFSQNEKIIITNLKDLLHNNIEVNTPAVMIVGQVVNMRDKLRS MEVALCKC >Mature_247_residues GKVYLVGAGPGDPELLTLKAIKALERSDVVLYDKLVNKDILSYAKKEAIKICVGKERGFHSIEQDNINDLILEYAHLGYD VTRLKSGDPFVFGRGGEEALFLKNHGVEFEVIPGVTSAVGLPTHAYIPITYRGISSSFAVITGHKENGSLKHINWDKIVG VDTLVFLMAVSSRQEIAKHLIDAGRDPNEPVAFVENGFSQNEKIIITNLKDLLHNNIEVNTPAVMIVGQVVNMRDKLRSM EVALCKC
Specific function: Catalyzes both methylations at C-2 and C-7 of uroporphyrinogen III leading to precorrin-1 and precorrin-2; their oxidative esterification gives respectively factor I octamethyl ester and sirohydrochlorin [H]
COG id: COG0007
COG function: function code H; Uroporphyrinogen-III methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the precorrin methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1789768, Length=238, Percent_Identity=42.436974789916, Blast_Score=204, Evalue=5e-54, Organism=Saccharomyces cerevisiae, GI6322922, Length=235, Percent_Identity=35.3191489361702, Blast_Score=128, Evalue=7e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000878 - InterPro: IPR014777 - InterPro: IPR014776 - InterPro: IPR006366 - InterPro: IPR003043 [H]
Pfam domain/function: PF00590 TP_methylase [H]
EC number: =2.1.1.107 [H]
Molecular weight: Translated: 27313; Mature: 27182
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: PS00839 SUMT_1 ; PS00840 SUMT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKVYLVGAGPGDPELLTLKAIKALERSDVVLYDKLVNKDILSYAKKEAIKICVGKERGF CCEEEEEECCCCCCCEEEHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHEEEEECCCCCC HSIEQDNINDLILEYAHLGYDVTRLKSGDPFVFGRGGEEALFLKNHGVEFEVIPGVTSAV CCCCCCCHHHHHHHHHHCCCEEEEECCCCCEEEECCCCEEEEEECCCCEEEECCCCHHHH GLPTHAYIPITYRGISSSFAVITGHKENGSLKHINWDKIVGVDTLVFLMAVSSRQEIAKH CCCCEEEEEEEEECCCCCEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHCCHHHHHHH LIDAGRDPNEPVAFVENGFSQNEKIIITNLKDLLHNNIEVNTPAVMIVGQVVNMRDKLRS HHHCCCCCCCCEEEEECCCCCCCEEEEEEHHHHHCCCCEECCCEEEEEHHHHHHHHHHHH MEVALCKC HHHHEECC >Mature Secondary Structure GKVYLVGAGPGDPELLTLKAIKALERSDVVLYDKLVNKDILSYAKKEAIKICVGKERGF CEEEEEECCCCCCCEEEHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHEEEEECCCCCC HSIEQDNINDLILEYAHLGYDVTRLKSGDPFVFGRGGEEALFLKNHGVEFEVIPGVTSAV CCCCCCCHHHHHHHHHHCCCEEEEECCCCCEEEECCCCEEEEEECCCCEEEECCCCHHHH GLPTHAYIPITYRGISSSFAVITGHKENGSLKHINWDKIVGVDTLVFLMAVSSRQEIAKH CCCCEEEEEEEEECCCCCEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHCCHHHHHHH LIDAGRDPNEPVAFVENGFSQNEKIIITNLKDLLHNNIEVNTPAVMIVGQVVNMRDKLRS HHHCCCCCCCCEEEEECCCCCCCEEEEEEHHHHHCCCCEECCCEEEEEHHHHHHHHHHHH MEVALCKC HHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]