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The map label for this gene is nirD [H]

Identifier: 195952722

GI number: 195952722

Start: 303201

End: 304214

Strand: Direct

Name: nirD [H]

Synonym: HY04AAS1_0344

Alternate gene names: 195952722

Gene position: 303201-304214 (Clockwise)

Preceding gene: 195952721

Following gene: 195952724

Centisome position: 19.44

GC content: 34.52

Gene sequence:

>1014_bases
ATGCAAGTGTTAAAACAAAAATTAATTGATGTAATCCAGCAAGATATACCCATACAAGAAAACCCTTTTCAGTGGATAGC
CGAACAGCTTAATACGGATTTAGACAATGTTTTTGAGCTTTTAAAAGCATTAAAACAAGAAGGTATTCTAAGGCAGATAG
CTCCCATATACGACACAAAATCCCTTGGATATCAGAGTGGACTTGCGGCTGTTGCTGTAGAAGACAACGATATAGAAAAG
GCGGTATATATTCTCAACGAACATCCCGGAGTAAGTCACAATTATCTTAGAAACGATACATTTAACATATGGTTTACGAT
AGCTATACCTCCAGACTCACGCATAGGATTAGAGGAAACAATTAGAATACTAATTAAAGAGATTGGTACAAATATCAAAT
ATGTAATATTGAACACCAAAAGAGTGTTTAAAATAAATACAAGATTTATGCAAGATGCTAAGGAAATGATGAAAAGAGAA
GACTTTGTAGACCCGAAAATATTTAGTGGCAGATTGGATGAGATAGATAAATATATAATAAGAGAGACACAGTATGACTT
ACCTATTGTAGATAAGCCCTTTCACGATATAGCAAATAGGCTTGATTTAGGAGTAGATATCCTGATTGAAAAACTCTTTA
AATATAAGGAACAAGGGATTATGAGGAGGTTTTCCGGGCTTATAAATCATAGGAAAGCGGGATTTAACGCAAATGGTATG
TCCGTATGGATAGTGCCAGAAGACAAGATAGAGGAATACGGAAAAATAATGGCTTCTTTTAAAGGGGTTACCCACTGCTA
TGAAAGAACCACCAACGAATTTTGGCGTTACAACCTATTTTGTATGATACATGGTAAGGACGAGAAAGAGGTTTACGATA
CGGTATACGCTATACAGCAAACTTTGGGAGATAAAATACCGTTTAAAGTATTATTCTCTTCCAAAGAGTTTAAGAAAACA
AGGTTAAGATATTTTGAGGATGATTATTATAGGTGGGAAGATAGATATATCTAA

Upstream 100 bases:

>100_bases
ACTTACTACACAACAATATAGAAGTAAATACCCCTGCTGTGATGATAGTAGGTCAGGTGGTAAACATGAGAGATAAATTA
AGATCCATGGAGGTGGCTTT

Downstream 100 bases:

>100_bases
CCCTCTTCAAGAAGTTTCTTTGTTATATCGTTTATACCGGAAGAAGAAAGGTTCTTTTGTCTTCTAAGCTTTGATACAGT
GCTTAAAACTTTCTCAATGT

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MQVLKQKLIDVIQQDIPIQENPFQWIAEQLNTDLDNVFELLKALKQEGILRQIAPIYDTKSLGYQSGLAAVAVEDNDIEK
AVYILNEHPGVSHNYLRNDTFNIWFTIAIPPDSRIGLEETIRILIKEIGTNIKYVILNTKRVFKINTRFMQDAKEMMKRE
DFVDPKIFSGRLDEIDKYIIRETQYDLPIVDKPFHDIANRLDLGVDILIEKLFKYKEQGIMRRFSGLINHRKAGFNANGM
SVWIVPEDKIEEYGKIMASFKGVTHCYERTTNEFWRYNLFCMIHGKDEKEVYDTVYAIQQTLGDKIPFKVLFSSKEFKKT
RLRYFEDDYYRWEDRYI

Sequences:

>Translated_337_residues
MQVLKQKLIDVIQQDIPIQENPFQWIAEQLNTDLDNVFELLKALKQEGILRQIAPIYDTKSLGYQSGLAAVAVEDNDIEK
AVYILNEHPGVSHNYLRNDTFNIWFTIAIPPDSRIGLEETIRILIKEIGTNIKYVILNTKRVFKINTRFMQDAKEMMKRE
DFVDPKIFSGRLDEIDKYIIRETQYDLPIVDKPFHDIANRLDLGVDILIEKLFKYKEQGIMRRFSGLINHRKAGFNANGM
SVWIVPEDKIEEYGKIMASFKGVTHCYERTTNEFWRYNLFCMIHGKDEKEVYDTVYAIQQTLGDKIPFKVLFSSKEFKKT
RLRYFEDDYYRWEDRYI
>Mature_337_residues
MQVLKQKLIDVIQQDIPIQENPFQWIAEQLNTDLDNVFELLKALKQEGILRQIAPIYDTKSLGYQSGLAAVAVEDNDIEK
AVYILNEHPGVSHNYLRNDTFNIWFTIAIPPDSRIGLEETIRILIKEIGTNIKYVILNTKRVFKINTRFMQDAKEMMKRE
DFVDPKIFSGRLDEIDKYIIRETQYDLPIVDKPFHDIANRLDLGVDILIEKLFKYKEQGIMRRFSGLINHRKAGFNANGM
SVWIVPEDKIEEYGKIMASFKGVTHCYERTTNEFWRYNLFCMIHGKDEKEVYDTVYAIQQTLGDKIPFKVLFSSKEFKKT
RLRYFEDDYYRWEDRYI

Specific function: Required for the biosynthesis of heme D1 of nitrite reductase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011991 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39884; Mature: 39884

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVLKQKLIDVIQQDIPIQENPFQWIAEQLNTDLDNVFELLKALKQEGILRQIAPIYDTK
CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHCCH
SLGYQSGLAAVAVEDNDIEKAVYILNEHPGVSHNYLRNDTFNIWFTIAIPPDSRIGLEET
HCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCHHCCCCEEEEEEEEECCCCCCCHHHH
IRILIKEIGTNIKYVILNTKRVFKINTRFMQDAKEMMKREDFVDPKIFSGRLDEIDKYII
HHHHHHHHCCCEEEEEEECCEEEEEHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHH
RETQYDLPIVDKPFHDIANRLDLGVDILIEKLFKYKEQGIMRRFSGLINHRKAGFNANGM
HHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
SVWIVPEDKIEEYGKIMASFKGVTHCYERTTNEFWRYNLFCMIHGKDEKEVYDTVYAIQQ
EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHHHHHHHHH
TLGDKIPFKVLFSSKEFKKTRLRYFEDDYYRWEDRYI
HHCCCCCEEEEECCHHHHHHHHHHHHCCHHCCCCCCC
>Mature Secondary Structure
MQVLKQKLIDVIQQDIPIQENPFQWIAEQLNTDLDNVFELLKALKQEGILRQIAPIYDTK
CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHCCH
SLGYQSGLAAVAVEDNDIEKAVYILNEHPGVSHNYLRNDTFNIWFTIAIPPDSRIGLEET
HCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCHHCCCCEEEEEEEEECCCCCCCHHHH
IRILIKEIGTNIKYVILNTKRVFKINTRFMQDAKEMMKREDFVDPKIFSGRLDEIDKYII
HHHHHHHHCCCEEEEEEECCEEEEEHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHH
RETQYDLPIVDKPFHDIANRLDLGVDILIEKLFKYKEQGIMRRFSGLINHRKAGFNANGM
HHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
SVWIVPEDKIEEYGKIMASFKGVTHCYERTTNEFWRYNLFCMIHGKDEKEVYDTVYAIQQ
EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHHHHHHHHH
TLGDKIPFKVLFSSKEFKKTRLRYFEDDYYRWEDRYI
HHCCCCCEEEEECCHHHHHHHHHHHHCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7747927 [H]