| Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
|---|---|
| Accession | NC_011126 |
| Length | 1,559,514 |
Click here to switch to the map view.
The map label for this gene is map [H]
Identifier: 195952665
GI number: 195952665
Start: 251827
End: 252600
Strand: Direct
Name: map [H]
Synonym: HY04AAS1_0287
Alternate gene names: 195952665
Gene position: 251827-252600 (Clockwise)
Preceding gene: 195952664
Following gene: 195952666
Centisome position: 16.15
GC content: 37.98
Gene sequence:
>774_bases ATGATAGAGCTTTATTCAAAATCTGAGATAGAAAAGATAAAAAAAGCTTGTCAAATAGTTAGTGATGTGCTAAAATATAT AGCTTCTATGGTAAAACCAGGAGTTATAACTTACGATTTGGAAATGGCAGCTAGAGAAAAGACTAAAGAGCTTGGTGGTA TACCGGCTTTTTTGAATTATCAACCGCCATTTTCCAAAAAAAAATACCCGGCTGCTTTGTGTGTTTCTATAAACGATGAA GTAGTGCACGGTATTCCATCAAAAACAAAAAAGATAAAGGATGGTGACTTTGTAAGTCTTGATTTTGGCGCTATATACGA TGGTTATGCAGGTGATGCGGCCATGACGATAGGGGTTGGTAATATTTCTTTAGAAAATCGGAAACTTATTGAGGCTACAA AAAAGGCGTTATATGAGGCTATCGCACAATGTAAACCGGGAAACTACCTTTATAATATATCTAAAAGCATAGAAACCGTA GCAAAAGAGTATGGTTTTGGTGTAGTGTGCGAATACGGTGGTCATGGAATAGGTAGAAACAGCCATGAGGAACCTTTTGT AGCCAATTGTACAGAGGTTATTACTTCTAAAATGAACGCACAGTTAAGGCCTGGTATGGTGATAGCTATAGAACCTATGT TTACCACTGGTAATGGCGCTGTTTATAAATCAAACGATGGTTGGACTGTAAAAGCAAAAGGTAAGTACGCTTGTCACTTC GAGCATACGGTAGCTATACTTGAAGACGGTCCTGTAGTGTTAACGGAGTGGTGA
Upstream 100 bases:
>100_bases CCTTCCCGCTCATAGAGTATTATAAATATAAAAACAAGCTTTTTGTAGTGTCTGCTGATGGTACTCAGGAAGAGGTCTTC GAAAAACTAAAAAGTATGTT
Downstream 100 bases:
>100_bases TATGGCAAAGAAGAACAAGAATCAAGAACCGGAAAAAGAAAAGGGTATAGTGTTTGAAGGTGTTATAGAAGAGGCTCTTC CAAACGCTATGTTTAGAGTT
Product: methionine aminopeptidase, type I
Products: NA
Alternate protein names: MAP; Peptidase M [H]
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MIELYSKSEIEKIKKACQIVSDVLKYIASMVKPGVITYDLEMAAREKTKELGGIPAFLNYQPPFSKKKYPAALCVSINDE VVHGIPSKTKKIKDGDFVSLDFGAIYDGYAGDAAMTIGVGNISLENRKLIEATKKALYEAIAQCKPGNYLYNISKSIETV AKEYGFGVVCEYGGHGIGRNSHEEPFVANCTEVITSKMNAQLRPGMVIAIEPMFTTGNGAVYKSNDGWTVKAKGKYACHF EHTVAILEDGPVVLTEW
Sequences:
>Translated_257_residues MIELYSKSEIEKIKKACQIVSDVLKYIASMVKPGVITYDLEMAAREKTKELGGIPAFLNYQPPFSKKKYPAALCVSINDE VVHGIPSKTKKIKDGDFVSLDFGAIYDGYAGDAAMTIGVGNISLENRKLIEATKKALYEAIAQCKPGNYLYNISKSIETV AKEYGFGVVCEYGGHGIGRNSHEEPFVANCTEVITSKMNAQLRPGMVIAIEPMFTTGNGAVYKSNDGWTVKAKGKYACHF EHTVAILEDGPVVLTEW >Mature_257_residues MIELYSKSEIEKIKKACQIVSDVLKYIASMVKPGVITYDLEMAAREKTKELGGIPAFLNYQPPFSKKKYPAALCVSINDE VVHGIPSKTKKIKDGDFVSLDFGAIYDGYAGDAAMTIGVGNISLENRKLIEATKKALYEAIAQCKPGNYLYNISKSIETV AKEYGFGVVCEYGGHGIGRNSHEEPFVANCTEVITSKMNAQLRPGMVIAIEPMFTTGNGAVYKSNDGWTVKAKGKYACHF EHTVAILEDGPVVLTEW
Specific function: Removes the amino-terminal methionine from nascent proteins [H]
COG id: COG0024
COG function: function code J; Methionine aminopeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24A family [H]
Homologues:
Organism=Homo sapiens, GI164420681, Length=257, Percent_Identity=33.0739299610895, Blast_Score=139, Evalue=3e-33, Organism=Homo sapiens, GI40385867, Length=256, Percent_Identity=29.296875, Blast_Score=129, Evalue=4e-30, Organism=Escherichia coli, GI1786364, Length=256, Percent_Identity=37.109375, Blast_Score=167, Evalue=4e-43, Organism=Escherichia coli, GI1788728, Length=226, Percent_Identity=27.4336283185841, Blast_Score=76, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71996291, Length=260, Percent_Identity=32.6923076923077, Blast_Score=124, Evalue=4e-29, Organism=Saccharomyces cerevisiae, GI6323273, Length=256, Percent_Identity=36.71875, Blast_Score=154, Evalue=1e-38, Organism=Drosophila melanogaster, GI24583427, Length=255, Percent_Identity=30.5882352941176, Blast_Score=136, Evalue=2e-32, Organism=Drosophila melanogaster, GI21355531, Length=256, Percent_Identity=32.03125, Blast_Score=130, Evalue=9e-31,
Paralogues:
None
Copy number: 3,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR002467 [H]
Pfam domain/function: PF00557 Peptidase_M24 [H]
EC number: =3.4.11.18 [H]
Molecular weight: Translated: 28139; Mature: 28139
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIELYSKSEIEKIKKACQIVSDVLKYIASMVKPGVITYDLEMAAREKTKELGGIPAFLNY CEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCCEEECC QPPFSKKKYPAALCVSINDEVVHGIPSKTKKIKDGDFVSLDFGAIYDGYAGDAAMTIGVG CCCCCCCCCCEEEEEEECHHHHCCCCCHHCCCCCCCEEEEECCCEECCCCCCEEEEEEEC NISLENRKLIEATKKALYEAIAQCKPGNYLYNISKSIETVAKEYGFGVVCEYGGHGIGRN CEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCEEEEECCCCCCCCC SHEEPFVANCTEVITSKMNAQLRPGMVIAIEPMFTTGNGAVYKSNDGWTVKAKGKYACHF CCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCEEEECCCCEEEEECCCEEEEE EHTVAILEDGPVVLTEW EEEEEEEECCCEEEECC >Mature Secondary Structure MIELYSKSEIEKIKKACQIVSDVLKYIASMVKPGVITYDLEMAAREKTKELGGIPAFLNY CEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCCEEECC QPPFSKKKYPAALCVSINDEVVHGIPSKTKKIKDGDFVSLDFGAIYDGYAGDAAMTIGVG CCCCCCCCCCEEEEEEECHHHHCCCCCHHCCCCCCCEEEEECCCEECCCCCCEEEEEEEC NISLENRKLIEATKKALYEAIAQCKPGNYLYNISKSIETVAKEYGFGVVCEYGGHGIGRN CEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCEEEEECCCCCCCCC SHEEPFVANCTEVITSKMNAQLRPGMVIAIEPMFTTGNGAVYKSNDGWTVKAKGKYACHF CCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCEEEECCCCEEEEECCCEEEEE EHTVAILEDGPVVLTEW EEEEEEEECCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]