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The map label for this gene is secY [H]

Identifier: 195952663

GI number: 195952663

Start: 249903

End: 251195

Strand: Direct

Name: secY [H]

Synonym: HY04AAS1_0285

Alternate gene names: 195952663

Gene position: 249903-251195 (Clockwise)

Preceding gene: 195952662

Following gene: 195952664

Centisome position: 16.02

GC content: 35.89

Gene sequence:

>1293_bases
GTGAATAATTTTTTAAAAGAAATATTTGAACTAGAAACCTTAAGAAAAAGAGTAGTATTTACTTTAATAGTATTTGCTAT
ATATAGACTTGGTAGCCATATACCGATTCCTGGTGTAGACCCTGTAGCTCTAGCGGACTTTATGAGCAACTTAAAAGGGT
CTTTGTTTTCTTTGTACGATATATTTTCTGGTGGTAATCTTTCGCGGATGACATTGTTTGCTCTTGGTGTAATGCCTTAT
ATATCAGCTTCTATCGTTATGCAGCTTTTATCAAGCGCAATACCGGAACTTCAAAAATTGGCAAAGGAAGAGGGTGATTA
CGGAAGGCAGAAAATAAACGAATACACAAAATATATAACAGTGTTTGTTGCAGGTTTCCAATCGCTGGGCATAGCTACTT
GGTTGGAACATCAGACTTCTCCTCACGGATATCCTGTTGTTCCTCATGGTGGAATACTTTTTGTAGTTGTTGCGGTACTT
GGAATGGTAGCCAGCACTATGATATTGGTATGGCTTGGTGATATGATAACGGAAAAAGGTATAGGCAACGGCATGTCTAT
GCTTATATTTGCCGGTATAGTTGCCAATTTTCCAGAGGCTACCATAAGATTTGTATCTATGCTTAGGCATGGAGATATTA
GTCCTTTTGCTTTCGTAGGGGCTATACTTATAATTATTGCTGTAATAGCCGCTATTGTAATATTTCAAGAAGCAGAGAGA
AGAATACCTATACAATATCCAAGAAGGCAAGTGGGAAGGCAAGAATTTGTTGGTGGTGCTACATATTTACCCATTAAGCT
AAATCCAGCAGGTGTTATACCTATTATATTTGCTCAATCTCTTTTAATTGTTCCTTCTACAATACTAGGATTTATAAAGA
ATCCCATAGCTCAGTCTATACATGATGCTTTTAATCCTCTTTCTTTGCCTTACAATTTTGCTTACGTGGTGCTAATAATA
TTTTTCACATATTTTTATACAGCTGTTTTGATTAATCCTTACGATGTGGCTGAGAACTTGAAAAAAGCAAATGGTTTCAT
ACCAGGTGTAAGGCCAGGTCAACAAACTGTAAAGTTTTTTGAAAGTGTTATAAATAGGTTAGTTATCATAGGAGCTGCTT
TCTTATCCATAGTGGCTATTGTGCCTTTGTTTTTGACTGTTTGGTTAAAAGTACCTTTTTACTTTGGTGGTACCACCGCT
CTTATAGTGGTTGGAGTAGCCTTAGATACTCTAAATCAAATAGATGCTCAAATAATAACTAAAAAGTATAAAGCTTATAC
GAGGAAAAAGTGA

Upstream 100 bases:

>100_bases
GTCACTAAAAAATTTAAGGTAAAAGTAGATGCTATATCTTCATCCGCCAAGCAGAAAATAGAAGCTGCTGGTGGTAGTGT
GGAGATTTTAGAGGCAGCAG

Downstream 100 bases:

>100_bases
TGATTTTGGTGTTGTTGGGTCCTCCTGGTTCTGGTAAAGGTACGCAAGGGGCTCTTTTGAAAAGTGAGCTTAGTTTTGAG
CACATATCTACTGGTGATAT

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MNNFLKEIFELETLRKRVVFTLIVFAIYRLGSHIPIPGVDPVALADFMSNLKGSLFSLYDIFSGGNLSRMTLFALGVMPY
ISASIVMQLLSSAIPELQKLAKEEGDYGRQKINEYTKYITVFVAGFQSLGIATWLEHQTSPHGYPVVPHGGILFVVVAVL
GMVASTMILVWLGDMITEKGIGNGMSMLIFAGIVANFPEATIRFVSMLRHGDISPFAFVGAILIIIAVIAAIVIFQEAER
RIPIQYPRRQVGRQEFVGGATYLPIKLNPAGVIPIIFAQSLLIVPSTILGFIKNPIAQSIHDAFNPLSLPYNFAYVVLII
FFTYFYTAVLINPYDVAENLKKANGFIPGVRPGQQTVKFFESVINRLVIIGAAFLSIVAIVPLFLTVWLKVPFYFGGTTA
LIVVGVALDTLNQIDAQIITKKYKAYTRKK

Sequences:

>Translated_430_residues
MNNFLKEIFELETLRKRVVFTLIVFAIYRLGSHIPIPGVDPVALADFMSNLKGSLFSLYDIFSGGNLSRMTLFALGVMPY
ISASIVMQLLSSAIPELQKLAKEEGDYGRQKINEYTKYITVFVAGFQSLGIATWLEHQTSPHGYPVVPHGGILFVVVAVL
GMVASTMILVWLGDMITEKGIGNGMSMLIFAGIVANFPEATIRFVSMLRHGDISPFAFVGAILIIIAVIAAIVIFQEAER
RIPIQYPRRQVGRQEFVGGATYLPIKLNPAGVIPIIFAQSLLIVPSTILGFIKNPIAQSIHDAFNPLSLPYNFAYVVLII
FFTYFYTAVLINPYDVAENLKKANGFIPGVRPGQQTVKFFESVINRLVIIGAAFLSIVAIVPLFLTVWLKVPFYFGGTTA
LIVVGVALDTLNQIDAQIITKKYKAYTRKK
>Mature_430_residues
MNNFLKEIFELETLRKRVVFTLIVFAIYRLGSHIPIPGVDPVALADFMSNLKGSLFSLYDIFSGGNLSRMTLFALGVMPY
ISASIVMQLLSSAIPELQKLAKEEGDYGRQKINEYTKYITVFVAGFQSLGIATWLEHQTSPHGYPVVPHGGILFVVVAVL
GMVASTMILVWLGDMITEKGIGNGMSMLIFAGIVANFPEATIRFVSMLRHGDISPFAFVGAILIIIAVIAAIVIFQEAER
RIPIQYPRRQVGRQEFVGGATYLPIKLNPAGVIPIIFAQSLLIVPSTILGFIKNPIAQSIHDAFNPLSLPYNFAYVVLII
FFTYFYTAVLINPYDVAENLKKANGFIPGVRPGQQTVKFFESVINRLVIIGAAFLSIVAIVPLFLTVWLKVPFYFGGTTA
LIVVGVALDTLNQIDAQIITKKYKAYTRKK

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=423, Percent_Identity=41.371158392435, Blast_Score=321, Evalue=6e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 47453; Mature: 47453

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS00755 SECY_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHCCC
>Mature Secondary Structure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HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]