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The map label for this gene is yrbH [C]

Identifier: 195952546

GI number: 195952546

Start: 149976

End: 150935

Strand: Direct

Name: yrbH [C]

Synonym: HY04AAS1_0166

Alternate gene names: 195952546

Gene position: 149976-150935 (Clockwise)

Preceding gene: 195952545

Following gene: 195952547

Centisome position: 9.62

GC content: 38.54

Gene sequence:

>960_bases
ATGAGCCTTGTAAAAGACACGGCTTTAGAGACTATCTCAAAAGAAATAGAGGCCGTTGAAGGTTTAAAGCTTTTAATAAA
CGAAGATTTTGAAAAAGCTATATATGTTATACATCGCTCCAAAGGTAAAGTTATATTGACTGGAGTGGGTAAGTCAGGTC
ATATAGCTAGGAAAATAGCTTCCACTATGGCAAGCGTTGGTACCCCCGCGGTGTTCTTGCATCCAAACGAGGCTTTACAC
GGAGACCTTGGTATTATTTCAAAAGAAGATGTTGTTTTGGCATTGTCCAACAGCGGCGAGTCTGCTGAAATACTCTATAT
GATTCCTTATATAAAAATGATGGGATGCTTCTTGATATCTGTTACAAACAATAAAAACTCCACTTTGGCAAAACAAAGCG
ATATATCAATAGTACTTAATATTGAAAAAGAAGCATGCCCCTTAAACTTGGCTCCCACATCTTCCACCACTGCCATGCTT
GTACTTGGTGATGCTATGGCTATGAGTCTTTTGAGGCTTTCTGGTTTTAAAGAAGAGGATTTTGCTCTTTTACATCCGGC
TGGGTTTTTAGGCAAGAAGCTAAAGCAAGTAAAAGATGTGGGTCATTTTGGCGATGAGCTTCCTATTGTAAAAAAAGATG
CAAAGATCTACGAGGCCATTATAGAGATAACTCAAAAGGGCTTTGGGGCTACAGCCGTAGTAGATGAAGCTGGAAAGCTG
GTGGGCATATTGACAGATGGTGATATAAGAAGGATTTTGGAAAGTAAAGTAGATATAAACACCACTAGTGTGTATGAGGT
TTGCACTAAAAACCCAAAAACTATATCAAAATCTGACATACTAGCAAAAGCTCTATCTTTGATGGAAAGTTATAAGATAA
CCGTTCTTATCATAGAAGAGGACGAAAAGCCCATAGGCATAATACACCTTCACGACATACTGAGGTCTGGTATAAATTGA

Upstream 100 bases:

>100_bases
ATAAAGAATTAGAGCAGGGGAAATGGGTGAAGATAAAAAATTTTATATCCAAAGAAAAAGCTTCTGAGGAATTGAAGAAG
GCCATAGAACGTTTTAACAA

Downstream 100 bases:

>100_bases
ATACTTCAAATATTTTTACAATCCCAAATCTTTTATCATTTTTTAGGCTTTTAATATCTCCATTTTTTTTATTTCTAGTA
AAAGCCGATATAAAGCTAGC

Product: KpsF/GutQ family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MSLVKDTALETISKEIEAVEGLKLLINEDFEKAIYVIHRSKGKVILTGVGKSGHIARKIASTMASVGTPAVFLHPNEALH
GDLGIISKEDVVLALSNSGESAEILYMIPYIKMMGCFLISVTNNKNSTLAKQSDISIVLNIEKEACPLNLAPTSSTTAML
VLGDAMAMSLLRLSGFKEEDFALLHPAGFLGKKLKQVKDVGHFGDELPIVKKDAKIYEAIIEITQKGFGATAVVDEAGKL
VGILTDGDIRRILESKVDINTTSVYEVCTKNPKTISKSDILAKALSLMESYKITVLIIEEDEKPIGIIHLHDILRSGIN

Sequences:

>Translated_319_residues
MSLVKDTALETISKEIEAVEGLKLLINEDFEKAIYVIHRSKGKVILTGVGKSGHIARKIASTMASVGTPAVFLHPNEALH
GDLGIISKEDVVLALSNSGESAEILYMIPYIKMMGCFLISVTNNKNSTLAKQSDISIVLNIEKEACPLNLAPTSSTTAML
VLGDAMAMSLLRLSGFKEEDFALLHPAGFLGKKLKQVKDVGHFGDELPIVKKDAKIYEAIIEITQKGFGATAVVDEAGKL
VGILTDGDIRRILESKVDINTTSVYEVCTKNPKTISKSDILAKALSLMESYKITVLIIEEDEKPIGIIHLHDILRSGIN
>Mature_318_residues
SLVKDTALETISKEIEAVEGLKLLINEDFEKAIYVIHRSKGKVILTGVGKSGHIARKIASTMASVGTPAVFLHPNEALHG
DLGIISKEDVVLALSNSGESAEILYMIPYIKMMGCFLISVTNNKNSTLAKQSDISIVLNIEKEACPLNLAPTSSTTAMLV
LGDAMAMSLLRLSGFKEEDFALLHPAGFLGKKLKQVKDVGHFGDELPIVKKDAKIYEAIIEITQKGFGATAVVDEAGKLV
GILTDGDIRRILESKVDINTTSVYEVCTKNPKTISKSDILAKALSLMESYKITVLIIEEDEKPIGIIHLHDILRSGIN

Specific function: Unknown

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789588, Length=310, Percent_Identity=45.4838709677419, Blast_Score=294, Evalue=4e-81,
Organism=Escherichia coli, GI87082151, Length=311, Percent_Identity=39.2282958199357, Blast_Score=224, Evalue=5e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR004800
- InterPro:   IPR001347 [H]

Pfam domain/function: PF00571 CBS; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 34528; Mature: 34397

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLVKDTALETISKEIEAVEGLKLLINEDFEKAIYVIHRSKGKVILTGVGKSGHIARKIA
CCCHHHHHHHHHHHHHHHHCCHHEEECCCCHHEEEEEECCCCCEEEEECCCCCHHHHHHH
STMASVGTPAVFLHPNEALHGDLGIISKEDVVLALSNSGESAEILYMIPYIKMMGCFLIS
HHHHHCCCCEEEECCCCCCCCCCCEEECCCEEEEEECCCCCEEEEEEHHHHHHCCEEEEE
VTNNKNSTLAKQSDISIVLNIEKEACPLNLAPTSSTTAMLVLGDAMAMSLLRLSGFKEED
EECCCCCCEEECCCCEEEEEECCCCCCCEECCCCCCEEEEEECHHHHHHHHHHCCCCCCC
FALLHPAGFLGKKLKQVKDVGHFGDELPIVKKDAKIYEAIIEITQKGFGATAVVDEAGKL
EEEECCCHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHCCCCCEEEEECCCCE
VGILTDGDIRRILESKVDINTTSVYEVCTKNPKTISKSDILAKALSLMESYKITVLIIEE
EEEEECCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEC
DEKPIGIIHLHDILRSGIN
CCCCEEEEEHHHHHHCCCC
>Mature Secondary Structure 
SLVKDTALETISKEIEAVEGLKLLINEDFEKAIYVIHRSKGKVILTGVGKSGHIARKIA
CCHHHHHHHHHHHHHHHHCCHHEEECCCCHHEEEEEECCCCCEEEEECCCCCHHHHHHH
STMASVGTPAVFLHPNEALHGDLGIISKEDVVLALSNSGESAEILYMIPYIKMMGCFLIS
HHHHHCCCCEEEECCCCCCCCCCCEEECCCEEEEEECCCCCEEEEEEHHHHHHCCEEEEE
VTNNKNSTLAKQSDISIVLNIEKEACPLNLAPTSSTTAMLVLGDAMAMSLLRLSGFKEED
EECCCCCCEEECCCCEEEEEECCCCCCCEECCCCCCEEEEEECHHHHHHHHHHCCCCCCC
FALLHPAGFLGKKLKQVKDVGHFGDELPIVKKDAKIYEAIIEITQKGFGATAVVDEAGKL
EEEECCCHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHCCCCCEEEEECCCCE
VGILTDGDIRRILESKVDINTTSVYEVCTKNPKTISKSDILAKALSLMESYKITVLIIEE
EEEEECCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEC
DEKPIGIIHLHDILRSGIN
CCCCEEEEEHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]