Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

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The map label for this gene is 195952480

Identifier: 195952480

GI number: 195952480

Start: 94906

End: 95247

Strand: Direct

Name: 195952480

Synonym: HY04AAS1_0100

Alternate gene names: NA

Gene position: 94906-95247 (Clockwise)

Preceding gene: 195952479

Following gene: 195952481

Centisome position: 6.09

GC content: 45.03

Gene sequence:

>342_bases
ATGGCTACAGTTAGCAAGCTAAAAGAGCTCATGACTCTCCCGGGTGCTGTGGCAGCGGGCGAGTTTACAGACGATGGTAG
GTTGGTAGCCTACTACGGGGATATAGATGAGAAATCTGCCGAAATTGCAGCTATGATGTGTGCTGCCAACAAGCTTATGG
GTAATATGCAGGCTAAAGGCTGGAGCACTTACACTGGCAAAGGCGGTTTTTATCCAGTAGAGGGCTTTGCGGTGGCTGGT
GGTAAGTATGTAGCTTGTATTTTCGGCAACGTAGGTGTGTTTTTGGAACTTTCAAAAGCTGATTTTGACAAGACCTTTGA
AGTACTATCAAAATATATTTAA

Upstream 100 bases:

>100_bases
AGTCATTAGAATATCAATGGTTTACTATTAAAAGTTTATTACATTATGATGGCACGATATTTGCCATATAAATAGTATCA
AACGTTAGGAGGTGTGGCTT

Downstream 100 bases:

>100_bases
GGAGGTGCAGTATGGCAAACCTTGATCAACTTTTAAGCATAAAAGGTGTATGGGCAGCTGGTGAGTTTTCTCAGGATGGT
AAACTCTTGGCTTACAAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MATVSKLKELMTLPGAVAAGEFTDDGRLVAYYGDIDEKSAEIAAMMCAANKLMGNMQAKGWSTYTGKGGFYPVEGFAVAG
GKYVACIFGNVGVFLELSKADFDKTFEVLSKYI

Sequences:

>Translated_113_residues
MATVSKLKELMTLPGAVAAGEFTDDGRLVAYYGDIDEKSAEIAAMMCAANKLMGNMQAKGWSTYTGKGGFYPVEGFAVAG
GKYVACIFGNVGVFLELSKADFDKTFEVLSKYI
>Mature_112_residues
ATVSKLKELMTLPGAVAAGEFTDDGRLVAYYGDIDEKSAEIAAMMCAANKLMGNMQAKGWSTYTGKGGFYPVEGFAVAGG
KYVACIFGNVGVFLELSKADFDKTFEVLSKYI

Specific function: Unknown

COG id: COG4831

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12061; Mature: 11930

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATVSKLKELMTLPGAVAAGEFTDDGRLVAYYGDIDEKSAEIAAMMCAANKLMGNMQAKG
CCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCC
WSTYTGKGGFYPVEGFAVAGGKYVACIFGNVGVFLELSKADFDKTFEVLSKYI
CCEECCCCCCEECCCEEECCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHCC
>Mature Secondary Structure 
ATVSKLKELMTLPGAVAAGEFTDDGRLVAYYGDIDEKSAEIAAMMCAANKLMGNMQAKG
CCHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCC
WSTYTGKGGFYPVEGFAVAGGKYVACIFGNVGVFLELSKADFDKTFEVLSKYI
CCEECCCCCCEECCCEEECCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA