| Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
|---|---|
| Accession | NC_011126 |
| Length | 1,559,514 |
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The map label for this gene is 195952481
Identifier: 195952481
GI number: 195952481
Start: 95259
End: 95582
Strand: Direct
Name: 195952481
Synonym: HY04AAS1_0101
Alternate gene names: NA
Gene position: 95259-95582 (Clockwise)
Preceding gene: 195952480
Following gene: 195952482
Centisome position: 6.11
GC content: 42.59
Gene sequence:
>324_bases ATGGCAAACCTTGATCAACTTTTAAGCATAAAAGGTGTATGGGCAGCTGGTGAGTTTTCTCAGGATGGTAAACTCTTGGC TTACAAAGGCAACATAAGTGAAGAAGAAGCTGCTATGGCCGCCATGATGTGTGCTGCCAATATGATGATGGCTGAGATGC AAACCCAAGGTTACACAGCCATGTCTGGTAAAGAGTGGACTCCTCTTGTAGGCTTTGCTCTTACTGGTCCAAAGTACTCT GTTTGCGTTGTAAAAGGTGTTGGTGTTTTTGTAAACAACGACGAAGTTTCTTTTAACGAAGTGTTCAAAGCTCTTTCTTC CTAA
Upstream 100 bases:
>100_bases CTTGTATTTTCGGCAACGTAGGTGTGTTTTTGGAACTTTCAAAAGCTGATTTTGACAAGACCTTTGAAGTACTATCAAAA TATATTTAAGGAGGTGCAGT
Downstream 100 bases:
>100_bases GGTTTATGGTGTTACTGGGGGTGGGGAGCCCCCACATTTTTTGTTTAGGAGTGGAATTATGTATAAATTTTTATCTTATG ATTTTATAAAAGCTTACAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MANLDQLLSIKGVWAAGEFSQDGKLLAYKGNISEEEAAMAAMMCAANMMMAEMQTQGYTAMSGKEWTPLVGFALTGPKYS VCVVKGVGVFVNNDEVSFNEVFKALSS
Sequences:
>Translated_107_residues MANLDQLLSIKGVWAAGEFSQDGKLLAYKGNISEEEAAMAAMMCAANMMMAEMQTQGYTAMSGKEWTPLVGFALTGPKYS VCVVKGVGVFVNNDEVSFNEVFKALSS >Mature_106_residues ANLDQLLSIKGVWAAGEFSQDGKLLAYKGNISEEEAAMAAMMCAANMMMAEMQTQGYTAMSGKEWTPLVGFALTGPKYSV CVVKGVGVFVNNDEVSFNEVFKALSS
Specific function: Unknown
COG id: COG4831
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11459; Mature: 11328
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 8.4 %Met (Translated Protein) 10.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 7.5 %Met (Mature Protein) 9.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANLDQLLSIKGVWAAGEFSQDGKLLAYKGNISEEEAAMAAMMCAANMMMAEMQTQGYTA CCCHHHHHEECCEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEE MSGKEWTPLVGFALTGPKYSVCVVKGVGVFVNNDEVSFNEVFKALSS CCCCCCCCEEEEEECCCCEEEEEEEECEEEEECCCCCHHHHHHHHCC >Mature Secondary Structure ANLDQLLSIKGVWAAGEFSQDGKLLAYKGNISEEEAAMAAMMCAANMMMAEMQTQGYTA CCHHHHHEECCEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEE MSGKEWTPLVGFALTGPKYSVCVVKGVGVFVNNDEVSFNEVFKALSS CCCCCCCCEEEEEECCCCEEEEEEEECEEEEECCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA