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The map label for this gene is yjeK [C]

Identifier: 195952479

GI number: 195952479

Start: 93651

End: 94748

Strand: Direct

Name: yjeK [C]

Synonym: HY04AAS1_0099

Alternate gene names: 195952479

Gene position: 93651-94748 (Clockwise)

Preceding gene: 195952478

Following gene: 195952480

Centisome position: 6.01

GC content: 36.43

Gene sequence:

>1098_bases
ATGATAAAAACAACTGACAAGTCAAAGTGGAATGATTGGCGTTGGCAACTTCAAAACCGTATAACCACTTTAGAAGAATT
ATCAAAATATATAGAGCTAACTAACGAAGAGATTAAGTTTTTTGATGCTGTTGCAGAAGAATATCCTTTTGCCGTGACCC
CTTATTATCTATCGCTTGTAAAAAATCCCAAAGATAAAAAAGATCCCATAAGGCTTCAAATAGTCCCAAGCCCTCTTGAA
ATAGATGAGAACGCCCAACAAAACTCACATCCAAACGCTTTAAACGAAGAAACTTTTATAAAAGGTCTTACTCATAGATA
CGAAGATAGGGCTCTTATAAGTGTAACCTCTTACTGCGGTGTTTATTGTAGGCATTGTATGAGAAAGCGCATTTTCAAAG
AGGGTACTCATGCCGCTCCCAAAGAGCTTTTAGATGTTTATTTTGATTATATTAAAAACCATAAAACCATAAAAGATGTT
TTAATATCAGGCGGAGACCCTCTTACTCTTGATAACGAAAGACTAAAATACATCCTTAATAACCTATCTTCTATAGAGCA
TCTTGAAGTGATAAGGATAGGCTCAAGGGTACCGGTGACACTTCCCCAGCGCCTTTACGATGAGGAGCTTCTTGATATAC
TATCGAGATATGACAAGCTTTGGATAAATACACACTTTAACCATCCAAACGAAATCACAGAAGATGCCAAAGTAGCTATA
AGAAATCTGCTAAAGGCTGGTGTGCCAGTAAACAATCAAGCTGTACTTTTAAAAGGTGTAAACGATGACAAAGAAACGAT
GCTTGAACTAATGAGGAAACTCTTAAGCATAAAGGTAAAACCTCAGTACCTTTTCCACTGTGACCCCATCACAGGCACAA
TTCATTTTAGGACCTCCATAGAAAAAGGCTTAGAGATAATGGATTATATGAGAGGAAGGCTAAGCGGGTTTGGTATACCC
ACTTACGCTATAGATTTACCTGGTGGTAAGGGTAAAGTTCCACTTATCCCAAGTTATTTTAAAAAGCTTGAAGACGGCTT
ATATGAGTTTATAGCTTTTGATAAAACAAAAGTTATAATAGAAGAAACACTTAAATAA

Upstream 100 bases:

>100_bases
GAAAGCTCTTAGAAAAGCAAAAAGAAGGTAAAAAACGCATGAAGCAGTTTGGCAAGGTATCTTTGCCTCAAGAGGCGTTT
TTAAGCGTTTTAAAAGCCCA

Downstream 100 bases:

>100_bases
CATCTATTGCAACATTGATGCAACATTGATGCAACATGAAACATCAGCATTTTTTAAAGTCATTAGAATATCAATGGTTT
ACTATTAAAAGTTTATTACA

Product: lysine 2,3-aminomutase YodO family protein

Products: (3S)-3,6-diaminohexanoate

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MIKTTDKSKWNDWRWQLQNRITTLEELSKYIELTNEEIKFFDAVAEEYPFAVTPYYLSLVKNPKDKKDPIRLQIVPSPLE
IDENAQQNSHPNALNEETFIKGLTHRYEDRALISVTSYCGVYCRHCMRKRIFKEGTHAAPKELLDVYFDYIKNHKTIKDV
LISGGDPLTLDNERLKYILNNLSSIEHLEVIRIGSRVPVTLPQRLYDEELLDILSRYDKLWINTHFNHPNEITEDAKVAI
RNLLKAGVPVNNQAVLLKGVNDDKETMLELMRKLLSIKVKPQYLFHCDPITGTIHFRTSIEKGLEIMDYMRGRLSGFGIP
TYAIDLPGGKGKVPLIPSYFKKLEDGLYEFIAFDKTKVIIEETLK

Sequences:

>Translated_365_residues
MIKTTDKSKWNDWRWQLQNRITTLEELSKYIELTNEEIKFFDAVAEEYPFAVTPYYLSLVKNPKDKKDPIRLQIVPSPLE
IDENAQQNSHPNALNEETFIKGLTHRYEDRALISVTSYCGVYCRHCMRKRIFKEGTHAAPKELLDVYFDYIKNHKTIKDV
LISGGDPLTLDNERLKYILNNLSSIEHLEVIRIGSRVPVTLPQRLYDEELLDILSRYDKLWINTHFNHPNEITEDAKVAI
RNLLKAGVPVNNQAVLLKGVNDDKETMLELMRKLLSIKVKPQYLFHCDPITGTIHFRTSIEKGLEIMDYMRGRLSGFGIP
TYAIDLPGGKGKVPLIPSYFKKLEDGLYEFIAFDKTKVIIEETLK
>Mature_365_residues
MIKTTDKSKWNDWRWQLQNRITTLEELSKYIELTNEEIKFFDAVAEEYPFAVTPYYLSLVKNPKDKKDPIRLQIVPSPLE
IDENAQQNSHPNALNEETFIKGLTHRYEDRALISVTSYCGVYCRHCMRKRIFKEGTHAAPKELLDVYFDYIKNHKTIKDV
LISGGDPLTLDNERLKYILNNLSSIEHLEVIRIGSRVPVTLPQRLYDEELLDILSRYDKLWINTHFNHPNEITEDAKVAI
RNLLKAGVPVNNQAVLLKGVNDDKETMLELMRKLLSIKVKPQYLFHCDPITGTIHFRTSIEKGLEIMDYMRGRLSGFGIP
TYAIDLPGGKGKVPLIPSYFKKLEDGLYEFIAFDKTKVIIEETLK

Specific function: Unknown

COG id: COG1509

COG function: function code E; Lysine 2,3-aminomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the KamA family [H]

Homologues:

Organism=Escherichia coli, GI1790589, Length=337, Percent_Identity=30.5637982195846, Blast_Score=158, Evalue=4e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003739
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: 5.4.3.2

Molecular weight: Translated: 42332; Mature: 42332

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKTTDKSKWNDWRWQLQNRITTLEELSKYIELTNEEIKFFDAVAEEYPFAVTPYYLSLV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEHHHHHHHH
KNPKDKKDPIRLQIVPSPLEIDENAQQNSHPNALNEETFIKGLTHRYEDRALISVTSYCG
CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
VYCRHCMRKRIFKEGTHAAPKELLDVYFDYIKNHKTIKDVLISGGDPLTLDNERLKYILN
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEECHHHHHHHHH
NLSSIEHLEVIRIGSRVPVTLPQRLYDEELLDILSRYDKLWINTHFNHPNEITEDAKVAI
HHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHH
RNLLKAGVPVNNQAVLLKGVNDDKETMLELMRKLLSIKVKPQYLFHCDPITGTIHFRTSI
HHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCEECCCCEEEEECCCCEEEEECCCH
EKGLEIMDYMRGRLSGFGIPTYAIDLPGGKGKVPLIPSYFKKLEDGLYEFIAFDKTKVII
HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHH
EETLK
HHHCC
>Mature Secondary Structure
MIKTTDKSKWNDWRWQLQNRITTLEELSKYIELTNEEIKFFDAVAEEYPFAVTPYYLSLV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEHHHHHHHH
KNPKDKKDPIRLQIVPSPLEIDENAQQNSHPNALNEETFIKGLTHRYEDRALISVTSYCG
CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
VYCRHCMRKRIFKEGTHAAPKELLDVYFDYIKNHKTIKDVLISGGDPLTLDNERLKYILN
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEECHHHHHHHHH
NLSSIEHLEVIRIGSRVPVTLPQRLYDEELLDILSRYDKLWINTHFNHPNEITEDAKVAI
HHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHH
RNLLKAGVPVNNQAVLLKGVNDDKETMLELMRKLLSIKVKPQYLFHCDPITGTIHFRTSI
HHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCEECCCCEEEEECCCCEEEEECCCH
EKGLEIMDYMRGRLSGFGIPTYAIDLPGGKGKVPLIPSYFKKLEDGLYEFIAFDKTKVII
HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHH
EETLK
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-lysine

Specific reaction: L-lysine = (3S)-3,6-diaminohexanoate

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]