Click here to switch to the map view.

The map label for this gene is 194738374

Identifier: 194738374

GI number: 194738374

Start: 2871881

End: 2873251

Strand: Reverse

Name: 194738374

Synonym: SeSA_A2964

Alternate gene names: NA

Gene position: 2873251-2871881 (Counterclockwise)

Preceding gene: 194738022

Following gene: 194735993

Centisome position: 61.02

GC content: 47.34

Gene sequence:

>1371_bases
ATGAAGGCTAAATATTTGGCGCTGATGATCGGTGCTTGCTTTTCTCATAACCTTTGGGCAGCGAATAATATCACTATTGA
GCAGCGTCTGGCTGAACTGGAGCAACGTGTTGTTAATGCTGAAAAACGGGCATCCGATGCCGAGGCGCAAATTCGCTCGC
TGAAACAGCAGCAGGTCGCCGCTACGCCGACGGTGAATGTCCAGTCCGCCGAGCCCATAGCAGCAGGTAAAACGCCGCCG
AAGCTGACCTTATCCGGATTCAGCGATATTAAGTTCTATGGCGATGTCGAATTTAATATGGATGCGGCAAGCCGTTCCGG
TAGCCTGACCTCGATGAGAACGTCAGCAAATAAAGATTGGGCATCAGGAACCAATGAACGCTGGGATATTAACGGACGCC
TGTTACTGGGCTTTGATGGCTACCAGCGGCTGGACAACGGTAATTTTGCCGGGTTCTCTGTACAGCCTCTGGCGGACCTG
ACCGGAAAAATGAACCTTGATGATGCCGTTTTCTTCTTTGGTCGTGAGAATGACTGGAAAATTAAGGTTGGTCGTTTTGA
AGCCTACGATATGTTCCCGCTGAATCAGGATACGTTTATTGAATATTCGGGGAATACAGCGAACGATCTTTACAGTGACG
GTTACGGCTATATCTATATGATGAAAGAAGGACGGGGACGTAGCGACAGTGGGGGTAACTTCCTGCTGAGTAAAACCATC
GACAACTGGTATTTCGAAGTTAACACATTGCTGGAAAATGGCAGTACGTTATATACCGAGAAGCAGTACCACGGAATGGA
TTTAAGCAACGATAAAAATGTGGCTTACGTCCGTCCGGTTATCGCCTGGCAAAACGGGCGTTTTTCAACGGCGATAGCGA
TGGAAAGTAACGTCGTTAACAACGCCTATGGCTATTATGAGAATGGGAAGTGGATCGATCAGTCAGATCGTACGGGCTAT
GGTTTTACCATGACCTGGAATGGTCAAAAAACTGACCCGGAAGATGGCGCAGTGATTAACCTGAATACCGCCTATATGGA
TGCGACCGATGAGACAGATTTTACCGCTGGGGTGAATGCGCTGTGGCATCGATTTGAACTGGGTTATATCTATGCGCATA
ACAAAATCGAAGCCTTCAATGCTACTAATATCGATGCCGTTTGTGAGGACGATTGCTGGATCACCGATCCCGGCAATTAT
GACATTCACACTATTCATGCCTCATATTTATTCCCCAACGTGATGGATATGAAAAACTTTAACATCTACCTCGGTGCCTA
TGCTTCATGGGTAGAGGCCAATCCGAATAATGGCGATAACAGTGAAGATGCGCGTTACGGCGGGCGTCTGAGATTCAAAT
ATTTCTTCTGA

Upstream 100 bases:

>100_bases
TGCGCCAGATATCCAGGTAATAACAAGACTCTACTAATAGCCGGTCGATGGGGTTTTTAGCAAATCTTATCTGGTATACA
TCAAACTTAAGGGATAAAAA

Downstream 100 bases:

>100_bases
TTGTTGGTCTACTAAAAAAGGGATCCGCAGATCCCTTTTATCAGATAGTTAGTGCGCGCCGCCGCCGCCGCCGCCCGCAC
CGAAGGGCGGTTTGGCGAAC

Product: putative glycoporin

Products: NA

Alternate protein names: Glycoporin RfaY; Glycoporin RafY

Number of amino acids: Translated: 456; Mature: 456

Protein sequence:

>456_residues
MKAKYLALMIGACFSHNLWAANNITIEQRLAELEQRVVNAEKRASDAEAQIRSLKQQQVAATPTVNVQSAEPIAAGKTPP
KLTLSGFSDIKFYGDVEFNMDAASRSGSLTSMRTSANKDWASGTNERWDINGRLLLGFDGYQRLDNGNFAGFSVQPLADL
TGKMNLDDAVFFFGRENDWKIKVGRFEAYDMFPLNQDTFIEYSGNTANDLYSDGYGYIYMMKEGRGRSDSGGNFLLSKTI
DNWYFEVNTLLENGSTLYTEKQYHGMDLSNDKNVAYVRPVIAWQNGRFSTAIAMESNVVNNAYGYYENGKWIDQSDRTGY
GFTMTWNGQKTDPEDGAVINLNTAYMDATDETDFTAGVNALWHRFELGYIYAHNKIEAFNATNIDAVCEDDCWITDPGNY
DIHTIHASYLFPNVMDMKNFNIYLGAYASWVEANPNNGDNSEDARYGGRLRFKYFF

Sequences:

>Translated_456_residues
MKAKYLALMIGACFSHNLWAANNITIEQRLAELEQRVVNAEKRASDAEAQIRSLKQQQVAATPTVNVQSAEPIAAGKTPP
KLTLSGFSDIKFYGDVEFNMDAASRSGSLTSMRTSANKDWASGTNERWDINGRLLLGFDGYQRLDNGNFAGFSVQPLADL
TGKMNLDDAVFFFGRENDWKIKVGRFEAYDMFPLNQDTFIEYSGNTANDLYSDGYGYIYMMKEGRGRSDSGGNFLLSKTI
DNWYFEVNTLLENGSTLYTEKQYHGMDLSNDKNVAYVRPVIAWQNGRFSTAIAMESNVVNNAYGYYENGKWIDQSDRTGY
GFTMTWNGQKTDPEDGAVINLNTAYMDATDETDFTAGVNALWHRFELGYIYAHNKIEAFNATNIDAVCEDDCWITDPGNY
DIHTIHASYLFPNVMDMKNFNIYLGAYASWVEANPNNGDNSEDARYGGRLRFKYFF
>Mature_456_residues
MKAKYLALMIGACFSHNLWAANNITIEQRLAELEQRVVNAEKRASDAEAQIRSLKQQQVAATPTVNVQSAEPIAAGKTPP
KLTLSGFSDIKFYGDVEFNMDAASRSGSLTSMRTSANKDWASGTNERWDINGRLLLGFDGYQRLDNGNFAGFSVQPLADL
TGKMNLDDAVFFFGRENDWKIKVGRFEAYDMFPLNQDTFIEYSGNTANDLYSDGYGYIYMMKEGRGRSDSGGNFLLSKTI
DNWYFEVNTLLENGSTLYTEKQYHGMDLSNDKNVAYVRPVIAWQNGRFSTAIAMESNVVNNAYGYYENGKWIDQSDRTGY
GFTMTWNGQKTDPEDGAVINLNTAYMDATDETDFTAGVNALWHRFELGYIYAHNKIEAFNATNIDAVCEDDCWITDPGNY
DIHTIHASYLFPNVMDMKNFNIYLGAYASWVEANPNNGDNSEDARYGGRLRFKYFF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51454; Mature: 51454

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAKYLALMIGACFSHNLWAANNITIEQRLAELEQRVVNAEKRASDAEAQIRSLKQQQVA
CCCCEEEEEEHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
ATPTVNVQSAEPIAAGKTPPKLTLSGFSDIKFYGDVEFNMDAASRSGSLTSMRTSANKDW
CCCEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEEEEECCCCCCCCCEEEEECCCCCCC
ASGTNERWDINGRLLLGFDGYQRLDNGNFAGFSVQPLADLTGKMNLDDAVFFFGRENDWK
CCCCCCEEECCCEEEEEECCHHHCCCCCCCCEEECCHHHCCCCCCCCCEEEEEECCCCEE
IKVGRFEAYDMFPLNQDTFIEYSGNTANDLYSDGYGYIYMMKEGRGRSDSGGNFLLSKTI
EEEEEEEEEEECCCCCCCEEEECCCCCCHHHCCCCCEEEEEECCCCCCCCCCCEEEEEEC
DNWYFEVNTLLENGSTLYTEKQYHGMDLSNDKNVAYVRPVIAWQNGRFSTAIAMESNVVN
CCEEEEEEEHCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEEECCCCC
NAYGYYENGKWIDQSDRTGYGFTMTWNGQKTDPEDGAVINLNTAYMDATDETDFTAGVNA
CCCCEECCCCEECCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHH
LWHRFELGYIYAHNKIEAFNATNIDAVCEDDCWITDPGNYDIHTIHASYLFPNVMDMKNF
HHHEEEEEEEEECCEEEEECCCCCCEEECCCCEEECCCCCEEEEEEEHHHCCCCCCCCCC
NIYLGAYASWVEANPNNGDNSEDARYGGRLRFKYFF
EEEEEEEEEEEECCCCCCCCCCCHHCCCEEEEEEEC
>Mature Secondary Structure
MKAKYLALMIGACFSHNLWAANNITIEQRLAELEQRVVNAEKRASDAEAQIRSLKQQQVA
CCCCEEEEEEHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
ATPTVNVQSAEPIAAGKTPPKLTLSGFSDIKFYGDVEFNMDAASRSGSLTSMRTSANKDW
CCCEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEEEEECCCCCCCCCEEEEECCCCCCC
ASGTNERWDINGRLLLGFDGYQRLDNGNFAGFSVQPLADLTGKMNLDDAVFFFGRENDWK
CCCCCCEEECCCEEEEEECCHHHCCCCCCCCEEECCHHHCCCCCCCCCEEEEEECCCCEE
IKVGRFEAYDMFPLNQDTFIEYSGNTANDLYSDGYGYIYMMKEGRGRSDSGGNFLLSKTI
EEEEEEEEEEECCCCCCCEEEECCCCCCHHHCCCCCEEEEEECCCCCCCCCCCEEEEEEC
DNWYFEVNTLLENGSTLYTEKQYHGMDLSNDKNVAYVRPVIAWQNGRFSTAIAMESNVVN
CCEEEEEEEHCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEEECCCCC
NAYGYYENGKWIDQSDRTGYGFTMTWNGQKTDPEDGAVINLNTAYMDATDETDFTAGVNA
CCCCEECCCCEECCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHH
LWHRFELGYIYAHNKIEAFNATNIDAVCEDDCWITDPGNYDIHTIHASYLFPNVMDMKNF
HHHEEEEEEEEECCEEEEECCCCCCEEECCCCEEECCCCCEEEEEEEHHHCCCCCCCCCC
NIYLGAYASWVEANPNNGDNSEDARYGGRLRFKYFF
EEEEEEEEEEEECCCCCCCCCCCHHCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA