| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is yhhQ [H]
Identifier: 194737663
GI number: 194737663
Start: 3630805
End: 3631545
Strand: Direct
Name: yhhQ [H]
Synonym: SeSA_A3771
Alternate gene names: 194737663
Gene position: 3630805-3631545 (Clockwise)
Preceding gene: 194734389
Following gene: 194738145
Centisome position: 77.1
GC content: 50.47
Gene sequence:
>741_bases ATGCCAGCGCAAAACAGTATTATGCGGCGGTTCTTTATTGGGTTCCCTCACCCCATCCAACAAAAAGGTCACAATATGAC TCCGTTTACACAATCACAGCGCATAAAAGCGTTGTTCTGGCTATCGCTATTCCATTTACTGGTGATCATTTCCAGTAACT ATCTGGTGCAGCTCCCCATCACTATTTTTGGTTTCCACACGACCTGGGGCGCGTTTAGTTTTCCTTTTATTTTTCTCGCC ACCGATCTTACCGTGCGTATTTTTGGCGCACCGCTGGCGCGCCGCATTATCTTCGCCGTCATGATCCCCGCGCTGCTGGT GTCGTATGTGGTGTCATCGCTGTTCTATATGGGCGCCTGGCAAGGTTTCGCCGCGCTGGCGAACTTTAATCTGTTTGTCG CCCGTATCGCCGCCGCCAGCTTTATGGCCTACGCGCTGGGACAGATCCTTGATGTCCATGTGTTTAACCGCCTGCGCCAA AATCGTCGCTGGTGGCTGGCGCCGACCGCTTCAACGCTGTTTGGCAATATCAGCGATACCCTTGCCTTTTTCTTCATTGC GTTCTGGCGAAGCCCCGATGCCTTTATGGCCGAGCACTGGATGGAAATTGCGCTGGTGGATTATTGCTTTAAGGTGCTCA TCAGCATTATTTTCTTCCTGCCGATGTACGGCGTTCTACTGAATATGTTGCTGAAAAAGCTGGCAGATAAATCTGAAATT TCCCCATTACCGGCAAGTTAA
Upstream 100 bases:
>100_bases GCTCATCTTCGTCTCAATGGTAGAAAAACGGCGATATTTTACGCCCATCTTCGTCAGTAAGCCAGGCAGGTTAACGATTG CGTGAAAATTAGCCATTGCA
Downstream 100 bases:
>100_bases AGGTTCGTTTTCCGAGTTGTGATAAGATGAGCGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAA TTTGGTTAAATATGCCGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MPAQNSIMRRFFIGFPHPIQQKGHNMTPFTQSQRIKALFWLSLFHLLVIISSNYLVQLPITIFGFHTTWGAFSFPFIFLA TDLTVRIFGAPLARRIIFAVMIPALLVSYVVSSLFYMGAWQGFAALANFNLFVARIAAASFMAYALGQILDVHVFNRLRQ NRRWWLAPTASTLFGNISDTLAFFFIAFWRSPDAFMAEHWMEIALVDYCFKVLISIIFFLPMYGVLLNMLLKKLADKSEI SPLPAS
Sequences:
>Translated_246_residues MPAQNSIMRRFFIGFPHPIQQKGHNMTPFTQSQRIKALFWLSLFHLLVIISSNYLVQLPITIFGFHTTWGAFSFPFIFLA TDLTVRIFGAPLARRIIFAVMIPALLVSYVVSSLFYMGAWQGFAALANFNLFVARIAAASFMAYALGQILDVHVFNRLRQ NRRWWLAPTASTLFGNISDTLAFFFIAFWRSPDAFMAEHWMEIALVDYCFKVLISIIFFLPMYGVLLNMLLKKLADKSEI SPLPAS >Mature_245_residues PAQNSIMRRFFIGFPHPIQQKGHNMTPFTQSQRIKALFWLSLFHLLVIISSNYLVQLPITIFGFHTTWGAFSFPFIFLAT DLTVRIFGAPLARRIIFAVMIPALLVSYVVSSLFYMGAWQGFAALANFNLFVARIAAASFMAYALGQILDVHVFNRLRQN RRWWLAPTASTLFGNISDTLAFFFIAFWRSPDAFMAEHWMEIALVDYCFKVLISIIFFLPMYGVLLNMLLKKLADKSEIS PLPAS
Specific function: Unknown
COG id: COG1738
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0862 [H]
Homologues:
Organism=Escherichia coli, GI1789882, Length=221, Percent_Identity=90.0452488687783, Blast_Score=407, Evalue=1e-115,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003744 [H]
Pfam domain/function: PF02592 DUF165 [H]
EC number: NA
Molecular weight: Translated: 28125; Mature: 27994
Theoretical pI: Translated: 10.60; Mature: 10.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAQNSIMRRFFIGFPHPIQQKGHNMTPFTQSQRIKALFWLSLFHLLVIISSNYLVQLPI CCCHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECH TIFGFHTTWGAFSFPFIFLATDLTVRIFGAPLARRIIFAVMIPALLVSYVVSSLFYMGAW HEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGFAALANFNLFVARIAAASFMAYALGQILDVHVFNRLRQNRRWWLAPTASTLFGNISDT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHCCHHHH LAFFFIAFWRSPDAFMAEHWMEIALVDYCFKVLISIIFFLPMYGVLLNMLLKKLADKSEI HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCC SPLPAS CCCCCC >Mature Secondary Structure PAQNSIMRRFFIGFPHPIQQKGHNMTPFTQSQRIKALFWLSLFHLLVIISSNYLVQLPI CCHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECH TIFGFHTTWGAFSFPFIFLATDLTVRIFGAPLARRIIFAVMIPALLVSYVVSSLFYMGAW HEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGFAALANFNLFVARIAAASFMAYALGQILDVHVFNRLRQNRRWWLAPTASTLFGNISDT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHCCHHHH LAFFFIAFWRSPDAFMAEHWMEIALVDYCFKVLISIIFFLPMYGVLLNMLLKKLADKSEI HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCC SPLPAS CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]