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The map label for this gene is 194737635

Identifier: 194737635

GI number: 194737635

Start: 4331799

End: 4332263

Strand: Direct

Name: 194737635

Synonym: SeSA_A4461

Alternate gene names: NA

Gene position: 4331799-4332263 (Clockwise)

Preceding gene: 194738151

Following gene: 194737485

Centisome position: 91.99

GC content: 52.04

Gene sequence:

>465_bases
ATGGCAGGACGGCGCCCGAAACCGACCCACCTGAAAGTGGTAACCGGCAATCCGGGCAAACGTAAACTCAACGATAAAGA
ACCCCAACCTGCAAAAGAAATCCCCAGCCCGCCAGCACATCTTAGCGACTGGGGAAAAGTTGCGTGGGGCAGGCTCACAG
TTTTACTTGATGGCATGGGTATTCTTACAGTTGCCGATTCACTGGCGCTGGAGCGTCTTTGCGATATCTATGCAGATATC
CTTCAGCTTCGTCTGACGATCGCGGACGAAGGGAGAACTTATACAGTCCAGACTGAAGGGGGATTTTTGATTAAGGCGAA
CCCGGCTGTTGCGATGCTGGCTGATGCCGATCGACGGTTTAAAAGTTATCTGGTCGAATTTGGCCTCACTCCGGCCGCCA
GAACAAAGGTGAAAGTTGATGGTGGAGAAGAGAAAGAAGACCCGCTCAACCAGTTCTTCGGTTGA

Upstream 100 bases:

>100_bases
GAGGGCGGGTTAAAAGTTCACAGCTTTGTGCCTGCGTGACCGCCCGCCCTCCTCTGTTTGCACAACCGCGAAATGAAAAG
TTTTTTTCCGGGAGGTTCCG

Downstream 100 bases:

>100_bases
CCCCACCACTCGTTATGCGATGGATGTGGCGTCCGGTAAGGAAATTGCCGGACCTGATATCCGCAATTCCTGCAAGCGTC
ACCTGAAGGATCTGGAGTCC

Product: putative phage terminase, small subunit, P27 family protein

Products: NA

Alternate protein names: P27 Family Phage Terminase Small Subunit; Phage Terminase Small Subunit P; Phage Terminase; ISHde5 Transposase OrfA; Terminase Small Subunit; Phage Terminasesmall Subunit

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MAGRRPKPTHLKVVTGNPGKRKLNDKEPQPAKEIPSPPAHLSDWGKVAWGRLTVLLDGMGILTVADSLALERLCDIYADI
LQLRLTIADEGRTYTVQTEGGFLIKANPAVAMLADADRRFKSYLVEFGLTPAARTKVKVDGGEEKEDPLNQFFG

Sequences:

>Translated_154_residues
MAGRRPKPTHLKVVTGNPGKRKLNDKEPQPAKEIPSPPAHLSDWGKVAWGRLTVLLDGMGILTVADSLALERLCDIYADI
LQLRLTIADEGRTYTVQTEGGFLIKANPAVAMLADADRRFKSYLVEFGLTPAARTKVKVDGGEEKEDPLNQFFG
>Mature_153_residues
AGRRPKPTHLKVVTGNPGKRKLNDKEPQPAKEIPSPPAHLSDWGKVAWGRLTVLLDGMGILTVADSLALERLCDIYADIL
QLRLTIADEGRTYTVQTEGGFLIKANPAVAMLADADRRFKSYLVEFGLTPAARTKVKVDGGEEKEDPLNQFFG

Specific function: Unknown

COG id: COG3747

COG function: function code L; Phage terminase, small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16884; Mature: 16752

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGRRPKPTHLKVVTGNPGKRKLNDKEPQPAKEIPSPPAHLSDWGKVAWGRLTVLLDGMG
CCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHEEEEEECCCC
ILTVADSLALERLCDIYADILQLRLTIADEGRTYTVQTEGGFLIKANPAVAMLADADRRF
HHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEECCCEEEECCCCEEEEECHHHHH
KSYLVEFGLTPAARTKVKVDGGEEKEDPLNQFFG
HHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHCC
>Mature Secondary Structure 
AGRRPKPTHLKVVTGNPGKRKLNDKEPQPAKEIPSPPAHLSDWGKVAWGRLTVLLDGMG
CCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHEEEEEECCCC
ILTVADSLALERLCDIYADILQLRLTIADEGRTYTVQTEGGFLIKANPAVAMLADADRRF
HHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEECCCEEEECCCCEEEEECHHHHH
KSYLVEFGLTPAARTKVKVDGGEEKEDPLNQFFG
HHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA