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The map label for this gene is ymfN [H]

Identifier: 194737485

GI number: 194737485

Start: 4332283

End: 4333959

Strand: Direct

Name: ymfN [H]

Synonym: SeSA_A4462

Alternate gene names: 194737485

Gene position: 4332283-4333959 (Clockwise)

Preceding gene: 194737635

Following gene: 194734728

Centisome position: 92.0

GC content: 52.47

Gene sequence:

>1677_bases
ATGGATGTGGCGTCCGGTAAGGAAATTGCCGGACCTGATATCCGCAATTCCTGCAAGCGTCACCTGAAGGATCTGGAGTC
CTGCCATGCCCGCGGTCTGGTATGGGATACGGAAACAGCGCAGCGTGCCATCGACTTTTTCGCGAAAGTGCTGAAACTTA
ACGGCGGCGAACACGAAGGCAAGCCGTTCAATCTGTTACCCTGGCAGTGCTTTATCGTGGGGTCTGTATTTGGCTGGAAA
AACTCAGACGGCTATCGCCGGTTCCGTATGGTGTACGTCGAATCCGGTAAGGGGTCAGGTAAATCACCGCTTGCAGCTGG
TATCGCTCTTTACTGCCTTGTCGCCGACAAGGAGCCACGCGCGGAAGTCTACGCGGCCGCCACGAAAAAAGACCAGGCCA
TGATACTGTTTCGCGATGCTGTGGCGATGGTTGACCAGTCGCCAGCACTGGCACAGCGGATTAACAAATCAGGTGGTGCC
GGGAAAGAGTGGAATCTGGCTTTTCTGCAGACCGGTTCTTTTTTCCGGCCTATCAGCTCGGACGACGGACAGTCAGGTCC
ACGCCCGCATTGTGCTCTGATAGACGAAATTCACGAACATAAAAATAACCAGGTCGTGGAAATGATGCGCGCCGGAACGA
AAGGCCGCCGGCAGGCGCTGATTTTCATGATAACTAACAGTGGCCATGATAAAACCAGCGTCTGTTATGACTATCACGAA
TATGGCCGCAAGGTTGCTGAAGGTTCAGTTGACGATGACAGCTTCTTTTCTTTTATCTGTTCGCTGGACGAAGGGGAAGA
TCCCTTTAAGGACGAGACCTGCTGGAAAAAGGCTAACCCGTCGCTGGGACATACCTTTACTGAGCGCTATCTGCGTGAGC
AGGTCACGCAGGCCCGCGGAATGCCGTCGAAGGAAAGTATTGTCCGGCGGTTGAACTTCTGCCAGTGGGTGGATGCTGAT
AATCCCTGGATGAGCAGTGATGTCTGGATGGGATGCGAGGAGGATTTCGACCTGCAGGAGCTGCGGGGCGAGGAATGCTA
TGGCGGTCTGGATCTTTCAGGCAGCCGGGATCTCACCGCACTGGCGCTGTTCTTTCCGAAAAAGAGAAAGCTGGTGGTGG
AATTCTGGACGCCAAAAGACACTCTGACAGACCGGGCGAAAACAGACCGGGTTCCATATGACGCATGGGAACGGGACGGA
TACATCCACACCACACCAGGTAAAGCCGTGAAGTATGGTTTTGTTGCTGAACGTATCGCAGATCTTGCAATGCAGTTCGA
CATCAAAGCCATTGCCTTCGATCAGTACCGTATTAAATACCTTGAGCCGGAACTGGACGAAGCCTCAGTATCAGTGCCGC
TGATCCCGCATGGGCAGGGCTACTACAAGGCAAAAGATTCTGGTCTGTGGATGCCGCATTCTATCGAGCTATTTGAGCAG
ATGCTGGATGATGGTGCAGTCGTTATTAAAACTAATCCCTGCCTGCGCTGGAATGCAGCTTCCGCAGTAACCGAAGCCGA
TCAGAAAGAAAACCGCATTTTTGCCAAGAAAAAAAGTACCGGACGTATTGATGGCGTGGTGGCTTCCGCTATGGCAATAG
GTGCATCAGAAGAGGATGTCACTGATGATGGCGATGTTGATGGTTTCTTTGATGATCCAATCATAGTGGGTATCTGA

Upstream 100 bases:

>100_bases
CTCACTCCGGCCGCCAGAACAAAGGTGAAAGTTGATGGTGGAGAAGAGAAAGAAGACCCGCTCAACCAGTTCTTCGGTTG
ACCCCACCACTCGTTATGCG

Downstream 100 bases:

>100_bases
TGGCGAATAATAAACACCCCGGGCGAATAAAAAGCGCCCTTTTAAACTGGCTGGGCGTCCCCGTCAGCCTGACTAACGGC
GAGTTCTGGCGCGAGTGGTT

Product: putative phage terminase, large subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MDVASGKEIAGPDIRNSCKRHLKDLESCHARGLVWDTETAQRAIDFFAKVLKLNGGEHEGKPFNLLPWQCFIVGSVFGWK
NSDGYRRFRMVYVESGKGSGKSPLAAGIALYCLVADKEPRAEVYAAATKKDQAMILFRDAVAMVDQSPALAQRINKSGGA
GKEWNLAFLQTGSFFRPISSDDGQSGPRPHCALIDEIHEHKNNQVVEMMRAGTKGRRQALIFMITNSGHDKTSVCYDYHE
YGRKVAEGSVDDDSFFSFICSLDEGEDPFKDETCWKKANPSLGHTFTERYLREQVTQARGMPSKESIVRRLNFCQWVDAD
NPWMSSDVWMGCEEDFDLQELRGEECYGGLDLSGSRDLTALALFFPKKRKLVVEFWTPKDTLTDRAKTDRVPYDAWERDG
YIHTTPGKAVKYGFVAERIADLAMQFDIKAIAFDQYRIKYLEPELDEASVSVPLIPHGQGYYKAKDSGLWMPHSIELFEQ
MLDDGAVVIKTNPCLRWNAASAVTEADQKENRIFAKKKSTGRIDGVVASAMAIGASEEDVTDDGDVDGFFDDPIIVGI

Sequences:

>Translated_558_residues
MDVASGKEIAGPDIRNSCKRHLKDLESCHARGLVWDTETAQRAIDFFAKVLKLNGGEHEGKPFNLLPWQCFIVGSVFGWK
NSDGYRRFRMVYVESGKGSGKSPLAAGIALYCLVADKEPRAEVYAAATKKDQAMILFRDAVAMVDQSPALAQRINKSGGA
GKEWNLAFLQTGSFFRPISSDDGQSGPRPHCALIDEIHEHKNNQVVEMMRAGTKGRRQALIFMITNSGHDKTSVCYDYHE
YGRKVAEGSVDDDSFFSFICSLDEGEDPFKDETCWKKANPSLGHTFTERYLREQVTQARGMPSKESIVRRLNFCQWVDAD
NPWMSSDVWMGCEEDFDLQELRGEECYGGLDLSGSRDLTALALFFPKKRKLVVEFWTPKDTLTDRAKTDRVPYDAWERDG
YIHTTPGKAVKYGFVAERIADLAMQFDIKAIAFDQYRIKYLEPELDEASVSVPLIPHGQGYYKAKDSGLWMPHSIELFEQ
MLDDGAVVIKTNPCLRWNAASAVTEADQKENRIFAKKKSTGRIDGVVASAMAIGASEEDVTDDGDVDGFFDDPIIVGI
>Mature_558_residues
MDVASGKEIAGPDIRNSCKRHLKDLESCHARGLVWDTETAQRAIDFFAKVLKLNGGEHEGKPFNLLPWQCFIVGSVFGWK
NSDGYRRFRMVYVESGKGSGKSPLAAGIALYCLVADKEPRAEVYAAATKKDQAMILFRDAVAMVDQSPALAQRINKSGGA
GKEWNLAFLQTGSFFRPISSDDGQSGPRPHCALIDEIHEHKNNQVVEMMRAGTKGRRQALIFMITNSGHDKTSVCYDYHE
YGRKVAEGSVDDDSFFSFICSLDEGEDPFKDETCWKKANPSLGHTFTERYLREQVTQARGMPSKESIVRRLNFCQWVDAD
NPWMSSDVWMGCEEDFDLQELRGEECYGGLDLSGSRDLTALALFFPKKRKLVVEFWTPKDTLTDRAKTDRVPYDAWERDG
YIHTTPGKAVKYGFVAERIADLAMQFDIKAIAFDQYRIKYLEPELDEASVSVPLIPHGQGYYKAKDSGLWMPHSIELFEQ
MLDDGAVVIKTNPCLRWNAASAVTEADQKENRIFAKKKSTGRIDGVVASAMAIGASEEDVTDDGDVDGFFDDPIIVGI

Specific function: Unknown

COG id: COG4626

COG function: function code R; Phage terminase-like protein, large subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage terminase family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR005021
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF03354 Terminase_1 [H]

EC number: NA

Molecular weight: Translated: 62460; Mature: 62460

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVASGKEIAGPDIRNSCKRHLKDLESCHARGLVWDTETAQRAIDFFAKVLKLNGGEHEG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHCCCCCCCC
KPFNLLPWQCFIVGSVFGWKNSDGYRRFRMVYVESGKGSGKSPLAAGIALYCLVADKEPR
CCCEECCEEEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCHHHHCEEEEEEEECCCCC
AEVYAAATKKDQAMILFRDAVAMVDQSPALAQRINKSGGAGKEWNLAFLQTGSFFRPISS
CCEEEEECCCCCEEEEEEHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCC
DDGQSGPRPHCALIDEIHEHKNNQVVEMMRAGTKGRRQALIFMITNSGHDKTSVCYDYHE
CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCCCCEEECHHH
YGRKVAEGSVDDDSFFSFICSLDEGEDPFKDETCWKKANPSLGHTFTERYLREQVTQARG
HHHHHHCCCCCCHHHHHHHEECCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCC
MPSKESIVRRLNFCQWVDADNPWMSSDVWMGCEEDFDLQELRGEECYGGLDLSGSRDLTA
CCCHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEE
LALFFPKKRKLVVEFWTPKDTLTDRAKTDRVPYDAWERDGYIHTTPGKAVKYGFVAERIA
EEEECCCCCEEEEEEECCCHHHHCCHHHCCCCCCHHCCCCEEEECCCCCEEHHHHHHHHH
DLAMQFDIKAIAFDQYRIKYLEPELDEASVSVPLIPHGQGYYKAKDSGLWMPHSIELFEQ
HHHHHHCCEEEEECCEEEEECCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCHHHHHHH
MLDDGAVVIKTNPCLRWNAASAVTEADQKENRIFAKKKSTGRIDGVVASAMAIGASEEDV
HHCCCEEEEECCCCEEECCHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHCCCCCCCC
TDDGDVDGFFDDPIIVGI
CCCCCCCCEECCCEEEEC
>Mature Secondary Structure
MDVASGKEIAGPDIRNSCKRHLKDLESCHARGLVWDTETAQRAIDFFAKVLKLNGGEHEG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHCCCCCCCC
KPFNLLPWQCFIVGSVFGWKNSDGYRRFRMVYVESGKGSGKSPLAAGIALYCLVADKEPR
CCCEECCEEEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCHHHHCEEEEEEEECCCCC
AEVYAAATKKDQAMILFRDAVAMVDQSPALAQRINKSGGAGKEWNLAFLQTGSFFRPISS
CCEEEEECCCCCEEEEEEHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCC
DDGQSGPRPHCALIDEIHEHKNNQVVEMMRAGTKGRRQALIFMITNSGHDKTSVCYDYHE
CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCCCCEEECHHH
YGRKVAEGSVDDDSFFSFICSLDEGEDPFKDETCWKKANPSLGHTFTERYLREQVTQARG
HHHHHHCCCCCCHHHHHHHEECCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCC
MPSKESIVRRLNFCQWVDADNPWMSSDVWMGCEEDFDLQELRGEECYGGLDLSGSRDLTA
CCCHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEE
LALFFPKKRKLVVEFWTPKDTLTDRAKTDRVPYDAWERDGYIHTTPGKAVKYGFVAERIA
EEEECCCCCEEEEEEECCCHHHHCCHHHCCCCCCHHCCCCEEEECCCCCEEHHHHHHHHH
DLAMQFDIKAIAFDQYRIKYLEPELDEASVSVPLIPHGQGYYKAKDSGLWMPHSIELFEQ
HHHHHHCCEEEEECCEEEEECCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCHHHHHHH
MLDDGAVVIKTNPCLRWNAASAVTEADQKENRIFAKKKSTGRIDGVVASAMAIGASEEDV
HHCCCEEEEECCCCEEECCHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHCCCCCCCC
TDDGDVDGFFDDPIIVGI
CCCCCCCCEECCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]