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The map label for this gene is rfbU [H]

Identifier: 194737305

GI number: 194737305

Start: 2185516

End: 2186577

Strand: Reverse

Name: rfbU [H]

Synonym: SeSA_A2314

Alternate gene names: 194737305

Gene position: 2186577-2185516 (Counterclockwise)

Preceding gene: 194738027

Following gene: 194736822

Centisome position: 46.43

GC content: 33.99

Gene sequence:

>1062_bases
ATGATCGTTAACCTATCACGTTTAGGTAAAAGTGGTACGGGAATGTGGCAATACTCGATTAAATTTTTAACGGCACTGCG
AGAAATAGCTGATGTTGACGCAATAATCTGTAGCAAGGTACACGCTGATTATTTTGAAAAGCTCGGTTATGCAGTAGTTA
CTGTTCCGAATATTGTTAGCAACACATCAAAAACATCGCGACTTAGACCATTAGTATGGTATGCATATAGTTACTGGCTT
GCGCTGAGGGTTTTAATTAAGTTTGGTAATAAAAAATTGGTGTGTACTACGCATCACACTATTCCCTTACTGAGAAACCA
AACGATAACCGTACATGATATAAGACCTTTTTATTATCCAGATAGTTTTATTCAGAAAGTGTATTTTCGCTTTTTATTAA
AAATGTCCGTTAAGCGATGTAAGCATGTTTTAACGGTATCTTATACCGTTAAAGATAGCATTGCTAAAACTTATAATGTA
GATAGTGAGAAAATATCAGTAATTTATAACAGCGTTAATAAATCTGATTTTATACAAAAAAAAGAAAAAGAGAATTACTT
TTTAGCTGTTGGAGCAAGTTGGGCACATAAAAATATTCATTCATTCATAAAAAATAAAAAAGTTTGGTCTGACTCTTATA
ATTTAATTATTGTATGTGGTCGTACTGACTATGCAATGTCTCTCCAACAAATGGTCGTTGATCTGGAACTAACAGATAAA
GTGATTTTTTTACATGAAGTCTCATTTAATGAATTAAAAGTTCTATATTCTAAAGCCTATGCGCTTGTTTATCCATCTAT
TGATGAGGGTTTTGGCATACCTCCTATTGAAGCGATGGCATCAAATACTCCAGTTATAGTGTCCGATATACCAGTATTTC
ATGAAGTGTTAACCAATGGTGCATTATATGTGAATCCGGATGATGAAAAAAGCTGGCAGAGTGCAATTGAAAATATAGAG
CAGTTGCCTGATGCAATTTCCCGATTTAACAACTATGTCGCACGGTATGACTTTGATAATATGAAGCAGATGGTTGGCAA
TTGGTTGGCGGAATCAAAATAA

Upstream 100 bases:

>100_bases
TTATTGCCATTAAGATGTTTGTGAATAATATAGTGTTTATATTGTTTGTTCTTATGATTATTGCTTTAAAGATGCGTATG
GAAAAACGGAGAGCTATTCA

Downstream 100 bases:

>100_bases
ATGAAGATAACATTAATTATTCCCACATATAATGCAGGGTCGCTTTGGCCTAATGTTCTGGATGCGATTAAGCAGCAAAC
TATATATCCGGATAAATTGA

Product: protein RfbU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MIVNLSRLGKSGTGMWQYSIKFLTALREIADVDAIICSKVHADYFEKLGYAVVTVPNIVSNTSKTSRLRPLVWYAYSYWL
ALRVLIKFGNKKLVCTTHHTIPLLRNQTITVHDIRPFYYPDSFIQKVYFRFLLKMSVKRCKHVLTVSYTVKDSIAKTYNV
DSEKISVIYNSVNKSDFIQKKEKENYFLAVGASWAHKNIHSFIKNKKVWSDSYNLIIVCGRTDYAMSLQQMVVDLELTDK
VIFLHEVSFNELKVLYSKAYALVYPSIDEGFGIPPIEAMASNTPVIVSDIPVFHEVLTNGALYVNPDDEKSWQSAIENIE
QLPDAISRFNNYVARYDFDNMKQMVGNWLAESK

Sequences:

>Translated_353_residues
MIVNLSRLGKSGTGMWQYSIKFLTALREIADVDAIICSKVHADYFEKLGYAVVTVPNIVSNTSKTSRLRPLVWYAYSYWL
ALRVLIKFGNKKLVCTTHHTIPLLRNQTITVHDIRPFYYPDSFIQKVYFRFLLKMSVKRCKHVLTVSYTVKDSIAKTYNV
DSEKISVIYNSVNKSDFIQKKEKENYFLAVGASWAHKNIHSFIKNKKVWSDSYNLIIVCGRTDYAMSLQQMVVDLELTDK
VIFLHEVSFNELKVLYSKAYALVYPSIDEGFGIPPIEAMASNTPVIVSDIPVFHEVLTNGALYVNPDDEKSWQSAIENIE
QLPDAISRFNNYVARYDFDNMKQMVGNWLAESK
>Mature_353_residues
MIVNLSRLGKSGTGMWQYSIKFLTALREIADVDAIICSKVHADYFEKLGYAVVTVPNIVSNTSKTSRLRPLVWYAYSYWL
ALRVLIKFGNKKLVCTTHHTIPLLRNQTITVHDIRPFYYPDSFIQKVYFRFLLKMSVKRCKHVLTVSYTVKDSIAKTYNV
DSEKISVIYNSVNKSDFIQKKEKENYFLAVGASWAHKNIHSFIKNKKVWSDSYNLIIVCGRTDYAMSLQQMVVDLELTDK
VIFLHEVSFNELKVLYSKAYALVYPSIDEGFGIPPIEAMASNTPVIVSDIPVFHEVLTNGALYVNPDDEKSWQSAIENIE
QLPDAISRFNNYVARYDFDNMKQMVGNWLAESK

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 40600; Mature: 40600

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVNLSRLGKSGTGMWQYSIKFLTALREIADVDAIICSKVHADYFEKLGYAVVTVPNIVS
CEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHC
NTSKTSRLRPLVWYAYSYWLALRVLIKFGNKKLVCTTHHTIPLLRNQTITVHDIRPFYYP
CCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCEEEEEECCCCCCC
DSFIQKVYFRFLLKMSVKRCKHVLTVSYTVKDSIAKTYNVDSEKISVIYNSVNKSDFIQK
HHHHHHHHHHHHHHHHHHHHHHEEEEEEEHHHHHHHHCCCCCHHEEEEEECCCHHHHHHH
KEKENYFLAVGASWAHKNIHSFIKNKKVWSDSYNLIIVCGRTDYAMSLQQMVVDLELTDK
HCCCCEEEEEECCHHHHHHHHHHHCCCEECCCCCEEEEECCCHHHHHHHHHHHHHEECCE
VIFLHEVSFNELKVLYSKAYALVYPSIDEGFGIPPIEAMASNTPVIVSDIPVFHEVLTNG
EEEEEECCHHHHHHHHHHEEEEEECCCCCCCCCCCHHHHCCCCCEEEECCHHHHHHHHCC
ALYVNPDDEKSWQSAIENIEQLPDAISRFNNYVARYDFDNMKQMVGNWLAESK
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIVNLSRLGKSGTGMWQYSIKFLTALREIADVDAIICSKVHADYFEKLGYAVVTVPNIVS
CEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHC
NTSKTSRLRPLVWYAYSYWLALRVLIKFGNKKLVCTTHHTIPLLRNQTITVHDIRPFYYP
CCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCEEEEEECCCCCCC
DSFIQKVYFRFLLKMSVKRCKHVLTVSYTVKDSIAKTYNVDSEKISVIYNSVNKSDFIQK
HHHHHHHHHHHHHHHHHHHHHHEEEEEEEHHHHHHHHCCCCCHHEEEEEECCCHHHHHHH
KEKENYFLAVGASWAHKNIHSFIKNKKVWSDSYNLIIVCGRTDYAMSLQQMVVDLELTDK
HCCCCEEEEEECCHHHHHHHHHHHCCCEECCCCCEEEEECCCHHHHHHHHHHHHHEECCE
VIFLHEVSFNELKVLYSKAYALVYPSIDEGFGIPPIEAMASNTPVIVSDIPVFHEVLTNG
EEEEEECCHHHHHHHHHHEEEEEECCCCCCCCCCCHHHHCCCCCEEEECCHHHHHHHHCC
ALYVNPDDEKSWQSAIENIEQLPDAISRFNNYVARYDFDNMKQMVGNWLAESK
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]